RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 BMP5P22003 454 aa13.07□□□□□ -0.32
HMGN3-202ENST00000344726 TIMP3P35625 211 aa13.07□□□□□ -0.32
HMGN3-202ENST00000344726 RPL3P39023 403 aaKnown RBP13.07□□□□□ -0.32
HMGN3-202ENST00000344726 RPL14P50914 215 aaKnown RBP13.07□□□□□ -0.32
HMGN3-202ENST00000344726 DIO3P55073 304 aa13.07□□□□□ -0.32
HMGN3-202ENST00000344726 C21orf58P58505 322 aa13.07□□□□□ -0.32
HMGN3-202ENST00000344726 LSM11P83369 360 aaKnown RBP eCLIP13.07□□□□□ -0.322e-7■■□□□ 11.8
HMGN3-202ENST00000344726 SRYQ05066 204 aa13.07□□□□□ -0.32
HMGN3-202ENST00000344726 BST1Q10588 318 aa13.07□□□□□ -0.32
HMGN3-202ENST00000344726 SLC25A35Q3KQZ1 300 aa13.07□□□□□ -0.32
HMGN3-202ENST00000344726 FIGNL1Q6PIW4 674 aa13.07□□□□□ -0.32
HMGN3-202ENST00000344726 ADGRE4PQ86SQ3 457 aa13.07□□□□□ -0.32
HMGN3-202ENST00000344726 CROCCP2Q86T23 111 aa13.07□□□□□ -0.32
HMGN3-202ENST00000344726 C9orf106Q8NAJ2 232 aa13.07□□□□□ -0.32
HMGN3-202ENST00000344726 OR4K17Q8NGC6 315 aa13.07□□□□□ -0.32
HMGN3-202ENST00000344726 MBD3L2Q8NHZ7 208 aaPredicted RBP13.07□□□□□ -0.32
HMGN3-202ENST00000344726 PSMA8Q8TAA3 256 aa13.07□□□□□ -0.32
HMGN3-202ENST00000344726 ZPLD1Q8TCW7 415 aa13.07□□□□□ -0.32
HMGN3-202ENST00000344726 DUSP19Q8WTR2 217 aa13.07□□□□□ -0.32
HMGN3-202ENST00000344726 PAIP2Q9BPZ3 127 aaKnown RBP13.07□□□□□ -0.32
HMGN3-202ENST00000344726 C3orf14Q9HBI5 128 aa13.07□□□□□ -0.32
HMGN3-202ENST00000344726 ZCCHC3Q9NUD5 404 aaKnown RBP13.07□□□□□ -0.32
HMGN3-202ENST00000344726 PNPOQ9NVS9 261 aa13.07□□□□□ -0.32
HMGN3-202ENST00000344726 ASIC5Q9NY37 505 aa13.07□□□□□ -0.32
HMGN3-202ENST00000344726 DKKL1Q9UK85 242 aa13.07□□□□□ -0.32
HMGN3-202ENST00000344726 MRTO4Q9UKD2 239 aaKnown RBP13.07□□□□□ -0.32
HMGN3-202ENST00000344726 EIF3LQ9Y262 564 aaKnown RBP13.07□□□□□ -0.32
HMGN3-202ENST00000344726 TMEM120BA0PK00 339 aa13.06□□□□□ -0.32
HMGN3-202ENST00000344726 HSPB2A8KAH6 182 aa13.06□□□□□ -0.32
HMGN3-202ENST00000344726 FAM47E-STBD1D6RA91 191 aa13.06□□□□□ -0.32
HMGN3-202ENST00000344726 HMGN2P05204 90 aaKnown RBP13.06□□□□□ -0.32
HMGN3-202ENST00000344726 MYZAPP0CAP1 466 aa13.06□□□□□ -0.32
HMGN3-202ENST00000344726 ZNF708P17019 499 aa13.06□□□□□ -0.32
HMGN3-202ENST00000344726 AGFG1P52594 562 aaKnown RBP13.06□□□□□ -0.32
HMGN3-202ENST00000344726 PSMD4P55036 377 aaKnown RBP13.06□□□□□ -0.32
HMGN3-202ENST00000344726 DSCR4P56555 118 aaPredicted RBP13.06□□□□□ -0.32
HMGN3-202ENST00000344726 CLDN8P56748 225 aa13.06□□□□□ -0.32
HMGN3-202ENST00000344726 CLDN18P56856 261 aa13.06□□□□□ -0.32
HMGN3-202ENST00000344726 PRR5P85299 388 aa13.06□□□□□ -0.32
HMGN3-202ENST00000344726 STX3Q13277 289 aa13.06□□□□□ -0.32
HMGN3-202ENST00000344726 LASP1Q14847 261 aaKnown RBP13.06□□□□□ -0.32
HMGN3-202ENST00000344726 HSPB2Q16082 182 aa13.06□□□□□ -0.32
HMGN3-202ENST00000344726 SMU1Q2TAY7 513 aa13.06□□□□□ -0.32
HMGN3-202ENST00000344726 VPS26BQ4G0F5 336 aa13.06□□□□□ -0.32
HMGN3-202ENST00000344726 CCNJQ5T5M9 372 aa13.06□□□□□ -0.32
HMGN3-202ENST00000344726 OR4C3Q8NH37 302 aa13.06□□□□□ -0.32
HMGN3-202ENST00000344726 OR5P2Q8WZ92 322 aa13.06□□□□□ -0.32
HMGN3-202ENST00000344726 NRGNQ92686 78 aa13.06□□□□□ -0.32
HMGN3-202ENST00000344726 SFXN2Q96NB2 322 aa13.06□□□□□ -0.32
HMGN3-202ENST00000344726 NUF2Q9BZD4 464 aa13.06□□□□□ -0.32
HMGN3-202ENST00000344726 BHLHE41Q9C0J9 482 aaPredicted RBP13.06□□□□□ -0.32
HMGN3-202ENST00000344726 CALHM2Q9HA72 323 aa13.06□□□□□ -0.32
HMGN3-202ENST00000344726 NOP53Q9NZM5 478 aaKnown RBP13.06□□□□□ -0.32
HMGN3-202ENST00000344726 KCNN3Q9UGI6 736 aa13.06□□□□□ -0.32
HMGN3-202ENST00000344726 SNX8Q9Y5X2 465 aa13.06□□□□□ -0.32
HMGN3-202ENST00000344726 ABCA4P78363 2273 aa13.06□□□□□ -0.32
HMGN3-202ENST00000344726 IGLV3-32A0A0A0MS00 114 aa13.05□□□□□ -0.32
HMGN3-202ENST00000344726 H0Y3Z8 333 aa13.05□□□□□ -0.32
HMGN3-202ENST00000344726 OXSR1O95747 527 aaPredicted RBP13.05□□□□□ -0.32
HMGN3-202ENST00000344726 ANGPTL1O95841 491 aa13.05□□□□□ -0.32
HMGN3-202ENST00000344726 IL2RAP01589 272 aa13.05□□□□□ -0.32
HMGN3-202ENST00000344726 ALOX5P09917 674 aa13.05□□□□□ -0.32
HMGN3-202ENST00000344726 DDX5P17844 614 aaKnown RBP13.05□□□□□ -0.32
HMGN3-202ENST00000344726 HK1P19367 917 aa13.05□□□□□ -0.32
HMGN3-202ENST00000344726 CHMP24386 653 aa13.05□□□□□ -0.32
HMGN3-202ENST00000344726 GCKP35557 465 aa13.05□□□□□ -0.32
HMGN3-202ENST00000344726 CCT3P49368 545 aaKnown RBP13.05□□□□□ -0.32
HMGN3-202ENST00000344726 CLDN15P56746 228 aa13.05□□□□□ -0.32
HMGN3-202ENST00000344726 MAGOHP61326 146 aaKnown RBP13.05□□□□□ -0.32
HMGN3-202ENST00000344726 HBA1P69905 142 aa13.05□□□□□ -0.32
HMGN3-202ENST00000344726 MAD2L1Q13257 205 aaPredicted RBP13.05□□□□□ -0.32
HMGN3-202ENST00000344726 TESK1Q15569 626 aa13.05□□□□□ -0.32
HMGN3-202ENST00000344726 CPEB4Q17RY0 729 aaKnown RBP eCLIP13.05□□□□□ -0.32
HMGN3-202ENST00000344726 HHATQ5VTY9 493 aa13.05□□□□□ -0.32
HMGN3-202ENST00000344726 OR4F3Q6IEY1 312 aa13.05□□□□□ -0.32
HMGN3-202ENST00000344726 ZCCHC12Q6PEW1 402 aa13.05□□□□□ -0.32
HMGN3-202ENST00000344726 ENPP6Q6UWR7 440 aa13.05□□□□□ -0.32
HMGN3-202ENST00000344726 CAMKMTQ7Z624 323 aa13.05□□□□□ -0.32
HMGN3-202ENST00000344726 CDH24Q86UP0 819 aa13.05□□□□□ -0.32
HMGN3-202ENST00000344726 COX18Q8N8Q8 333 aa13.05□□□□□ -0.32
HMGN3-202ENST00000344726 OR5M1Q8NGP8 315 aa13.05□□□□□ -0.32
HMGN3-202ENST00000344726 MGARPQ8TDB4 240 aa13.05□□□□□ -0.32
HMGN3-202ENST00000344726 JADE3Q92613 823 aa13.05□□□□□ -0.32
HMGN3-202ENST00000344726 CDS1Q92903 461 aa13.05□□□□□ -0.32
HMGN3-202ENST00000344726 TLCD1Q96CP7 247 aa13.05□□□□□ -0.32
HMGN3-202ENST00000344726 C1GALT1C1Q96EU7 318 aa13.05□□□□□ -0.32
HMGN3-202ENST00000344726 KLHDC3Q9BQ90 382 aa13.05□□□□□ -0.32
HMGN3-202ENST00000344726 DUSP26Q9BV47 211 aa13.05□□□□□ -0.32
HMGN3-202ENST00000344726 TBL1XR1Q9BZK7 514 aa13.05□□□□□ -0.32
HMGN3-202ENST00000344726 TMBIM4Q9HC24 238 aa13.05□□□□□ -0.32
HMGN3-202ENST00000344726 SDHAF3Q9NRP4 125 aa13.05□□□□□ -0.32
HMGN3-202ENST00000344726 ATAD3AQ9NVI7 634 aa13.05□□□□□ -0.32
HMGN3-202ENST00000344726 GPATCH2Q9NW75 528 aa13.05□□□□□ -0.32
HMGN3-202ENST00000344726 CLCF1Q9UBD9 225 aa13.05□□□□□ -0.32
HMGN3-202ENST00000344726 ITGB1BP2Q9UKP3 347 aa13.05□□□□□ -0.32
HMGN3-202ENST00000344726 KCNE3Q9Y6H6 103 aa13.05□□□□□ -0.32
HMGN3-202ENST00000344726 F8P00451 2351 aa13.05□□□□□ -0.32
HMGN3-202ENST00000344726 HIVEP1P15822 2718 aa13.04□□□□□ -0.32
HMGN3-202ENST00000344726 CLCA1A8K7I4 914 aa13.04□□□□□ -0.32
HMGN3-202ENST00000344726 ALG1L2C9J202 215 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms