RNA–Protein interactions for RNA: ENST00000343508.7

CSMD3-203, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best) BASIC

Gene CSMD3, Length 13,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-203ENST00000343508 RAF1P04049 648 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 PDHA2P29803 388 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 GKP32189 559 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 CSNK1DP48730 415 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 ARFRP1Q13795 201 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 MEF2DQ14814 521 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 LEXMQ3ZCV2 418 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 CDNFQ49AH0 187 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 CATSPEREQ5SY80 951 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 NADSYN1Q6IA69 706 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 C8orf82Q6P1X6 216 aaPredicted RBP4.51□□□□□ -1.69
CSMD3-203ENST00000343508 GPR26Q8NDV2 337 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 SCARB1Q8WTV0 552 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 TMEM40Q8WWA1 233 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 RAB7BQ96AH8 199 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 DGAT2Q96PD7 388 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 NKX6-2Q9C056 277 aaPredicted RBP4.51□□□□□ -1.69
CSMD3-203ENST00000343508 PIGMQ9H3S5 423 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 ANKRD19PQ9H560 264 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 PLAC1Q9HBJ0 212 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 DMRT3Q9NQL9 472 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 C1GALT1Q9NS00 363 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.51□□□□□ -1.69
CSMD3-203ENST00000343508 PTPRFP10586 1907 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 RAB19A4D1S5 217 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 SCGB1D2O95969 90 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 CD3GP09693 182 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 SOX9P48436 509 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 HENMT1Q5T8I9 393 aaKnown RBP4.51□□□□□ -1.69
CSMD3-203ENST00000343508 POMZP3Q6PJE2 187 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 SLC16A12Q6ZSM3 486 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 NRROSQ86YC3 692 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 ZNF680Q8NEM1 530 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 OR6N2Q8NGY6 317 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 SLC38A5Q8WUX1 472 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 MFFQ9GZY8 342 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 KCNK12Q9HB15 430 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 CFAP20Q9Y6A4 193 aaKnown RBP4.51□□□□□ -1.69
CSMD3-203ENST00000343508 ZNF840PA6NDX5 716 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 H7BY64 318 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 M0R3H8 397 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 INPPL1O15357 1258 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 CDK2P24941 298 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 STK19P49842 368 aaPredicted RBP4.51□□□□□ -1.69
CSMD3-203ENST00000343508 PER3P56645 1201 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 FAM214AQ32MH5 1076 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 TCTE1Q5JU00 501 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 PODNL1Q6PEZ8 512 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 GAREM2Q75VX8 874 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 BTLAQ7Z6A9 289 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 SCD5Q86SK9 330 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 OR6V1Q8N148 313 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 SLC43A2Q8N370 569 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 ZCCHC10Q8TBK6 192 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 PRAP1Q96NZ9 151 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 SLC38A1Q9H2H9 487 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 B4GALT6Q9UBX8 382 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 CCL16O15467 120 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 GJB3O75712 270 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 TPPPO94811 219 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 ARAFP10398 606 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 GNSP15586 552 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 ZNF20P17024 532 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 AHRP35869 848 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 GIPRP48546 466 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 CAV3P56539 151 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 UAP1L1Q3KQV9 507 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 MRPL10Q7Z7H8 261 aaKnown RBP4.51□□□□□ -1.69
CSMD3-203ENST00000343508 DTX3Q8N9I9 347 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 OR14K1Q8NGZ2 314 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 C10orf90Q96M02 699 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 SYT17Q9BSW7 474 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 ZDHHC4Q9NPG8 344 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 TMEM184CQ9NVA4 438 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 BOLA1Q9Y3E2 137 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 LOC100509620A0A075B734 347 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 BORCS7-ASMTA0A0B4J1R7 106 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 A0A1W2PRU2 124 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 TMEM129A0AVI4 362 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 FEZF1A0PJY2 475 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 MBLAC1A4D2B0 266 aaPredicted RBP4.51□□□□□ -1.69
CSMD3-203ENST00000343508 TSTD3H0UI37 97 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 PSMD9O00233 223 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 C1orf105O95561 183 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 FOSL1P15407 271 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 PSMB1P20618 241 aaKnown RBP4.51□□□□□ -1.69
CSMD3-203ENST00000343508 S100PP25815 95 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 RIDAP52758 137 aaKnown RBP4.51□□□□□ -1.69
CSMD3-203ENST00000343508 RNF165Q6ZSG1 346 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 RBM23Q86U06 439 aaKnown RBP4.51□□□□□ -1.69
CSMD3-203ENST00000343508 ZNF619Q8N2I2 560 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 FAM26EQ8N5C1 309 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 POGLUT1Q8NBL1 392 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 WDR20Q8TBZ3 569 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 PRRT1Q99946 306 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 TREX2Q9BQ50 279 aaPredicted RBP4.51□□□□□ -1.69
CSMD3-203ENST00000343508 KATNBL1Q9H079 304 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 A4GALTQ9NPC4 353 aa4.51□□□□□ -1.69
CSMD3-203ENST00000343508 ACSS1Q9NUB1 689 aaPredicted RBP4.51□□□□□ -1.69
CSMD3-203ENST00000343508 SDHAF2Q9NX18 166 aa4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms