RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 RPS19BP1Q86WX3 136 aaKnown RBP13.39□□□□□ -0.27
NIPAL3-202ENST00000339255 SMYD1Q8NB12 490 aa13.39□□□□□ -0.27
NIPAL3-202ENST00000339255 ZNF354BQ96LW1 612 aa13.39□□□□□ -0.27
NIPAL3-202ENST00000339255 LMF1Q96S06 567 aa13.39□□□□□ -0.27
NIPAL3-202ENST00000339255 CCNL2Q96S94 520 aaPredicted RBP13.39□□□□□ -0.27
NIPAL3-202ENST00000339255 ADOQ96SZ5 270 aa13.39□□□□□ -0.27
NIPAL3-202ENST00000339255 SEPHS2Q99611 448 aa13.39□□□□□ -0.27
NIPAL3-202ENST00000339255 QRSL1Q9H0R6 528 aaKnown RBP13.39□□□□□ -0.27
NIPAL3-202ENST00000339255 KLHL28Q9NXS3 571 aa13.39□□□□□ -0.27
NIPAL3-202ENST00000339255 ABCG2Q9UNQ0 655 aa13.39□□□□□ -0.27
NIPAL3-202ENST00000339255 V9GYQ6 96 aa13.39□□□□□ -0.27
NIPAL3-202ENST00000339255 FREM2Q5SZK8 3169 aa13.39□□□□□ -0.27
NIPAL3-202ENST00000339255 ITGA10O75578 1167 aa13.38□□□□□ -0.27
NIPAL3-202ENST00000339255 KRT36O76013 467 aa13.38□□□□□ -0.27
NIPAL3-202ENST00000339255 NADKO95544 446 aaPredicted RBP13.38□□□□□ -0.27
NIPAL3-202ENST00000339255 FESP07332 822 aa13.38□□□□□ -0.27
NIPAL3-202ENST00000339255 CELA2AP08217 269 aa13.38□□□□□ -0.27
NIPAL3-202ENST00000339255 FBXO45P0C2W1 286 aa13.38□□□□□ -0.27
NIPAL3-202ENST00000339255 ITGA2P17301 1181 aa13.38□□□□□ -0.27
NIPAL3-202ENST00000339255 TBXA2RP21731 343 aa13.38□□□□□ -0.27
NIPAL3-202ENST00000339255 KCNJ10P78508 379 aa13.38□□□□□ -0.27
NIPAL3-202ENST00000339255 Q0VFX4 171 aa13.38□□□□□ -0.27
NIPAL3-202ENST00000339255 RCN1Q15293 331 aa13.38□□□□□ -0.27
NIPAL3-202ENST00000339255 DUSP7Q16829 419 aa13.38□□□□□ -0.27
NIPAL3-202ENST00000339255 OLIG3Q7RTU3 272 aa13.38□□□□□ -0.27
NIPAL3-202ENST00000339255 VTCN1Q7Z7D3 282 aa13.38□□□□□ -0.27
NIPAL3-202ENST00000339255 ZAR1Q86SH2 424 aa13.38□□□□□ -0.27
NIPAL3-202ENST00000339255 TTC9Q92623 222 aa13.38□□□□□ -0.27
NIPAL3-202ENST00000339255 SLC35B4Q969S0 331 aa13.38□□□□□ -0.27
NIPAL3-202ENST00000339255 SLCO4A1Q96BD0 722 aa13.38□□□□□ -0.27
NIPAL3-202ENST00000339255 RASL10BQ96S79 203 aa13.38□□□□□ -0.27
NIPAL3-202ENST00000339255 LHPPQ9H008 270 aa13.38□□□□□ -0.27
NIPAL3-202ENST00000339255 RNPEPL1Q9HAU8 725 aa13.38□□□□□ -0.27
NIPAL3-202ENST00000339255 IL1RAPQ9NPH3 570 aa13.38□□□□□ -0.27
NIPAL3-202ENST00000339255 POLHQ9Y253 713 aa13.38□□□□□ -0.27
NIPAL3-202ENST00000339255 TMEM229AB2RXF0 380 aa13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 H3BNH8 94 aa13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 H3BNX3 289 aa13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 SCDO00767 359 aa13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 CDK2AP1O14519 115 aa13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 UTS2O95399 124 aa13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 SEMG1P04279 462 aa13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 IFNW1P05000 195 aa13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 MAGEA2P43356 314 aa13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 SSR4P51571 173 aa13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 SOX8P57073 446 aa13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 MLF1P58340 268 aa13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 CDC20Q12834 499 aa13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 PDZK1Q5T2W1 519 aa13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 PRR22Q8IZ63 422 aa13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 GPR32P1Q8NGA4 272 aa13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 APOBEC4Q8WW27 367 aaKnown RBP13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 ZG16BQ96DA0 208 aa13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 TMCO6Q96DC7 493 aa13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 SPACA9Q96E40 222 aaPredicted RBP13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 THOC3Q96J01 351 aaKnown RBP13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 CHID1Q9BWS9 393 aa13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 RASSF4Q9H2L5 321 aa13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 CCDC86Q9H6F5 360 aaKnown RBP13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 LIN28AQ9H9Z2 209 aaKnown RBP13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 HHATLQ9HCP6 504 aa13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 C6orf203Q9P0P8 240 aaPredicted RBP13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 STX18Q9P2W9 335 aaKnown RBP13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 SLC35A3Q9Y2D2 325 aa13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 DTNAQ9Y4J8 743 aa13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 NCOR2Q9Y618 2525 aa13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 A0A1W2PQD3 144 aa13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 KLK10O43240 276 aa13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 TLX3O43711 291 aaPredicted RBP13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 ICOSLGO75144 302 aa13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 ATP6V1G2O95670 118 aa13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 LGI1O95970 557 aa13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 FABP3P05413 133 aa13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 CYP4B1P13584 511 aa13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 EEF1A1P68104 462 aaKnown RBP13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 NTRK2Q16620 822 aa13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 MEP1AQ16819 746 aa13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 GRAMD1BQ3KR37 738 aa13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 KLHL26Q53HC5 615 aa13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 NUP54Q7Z3B4 507 aa13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 PIWIL3Q7Z3Z3 882 aaKnown RBP13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 VRK2Q86Y07 508 aa13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 OR4C3Q8NH37 302 aa13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 ASB15Q8WXK1 588 aa13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 NAF1Q96HR8 494 aaKnown RBP13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 KCNE5Q9UJ90 142 aa13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 SH3GLB1Q9Y371 365 aa13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 URB1O60287 2271 aaKnown RBP13.37□□□□□ -0.27
NIPAL3-202ENST00000339255 CDHR4A6H8M9 788 aa13.36□□□□□ -0.27
NIPAL3-202ENST00000339255 TPST1O60507 370 aa13.36□□□□□ -0.27
NIPAL3-202ENST00000339255 UGT2B11O75310 529 aa13.36□□□□□ -0.27
NIPAL3-202ENST00000339255 DEAF1O75398 565 aaPredicted RBP13.36□□□□□ -0.27
NIPAL3-202ENST00000339255 OXSR1O95747 527 aaPredicted RBP13.36□□□□□ -0.27
NIPAL3-202ENST00000339255 PRKAR1AP10644 381 aa13.36□□□□□ -0.27
NIPAL3-202ENST00000339255 ITGA3P26006 1051 aa13.36□□□□□ -0.27
NIPAL3-202ENST00000339255 ADH7P40394 386 aa13.36□□□□□ -0.27
NIPAL3-202ENST00000339255 CLK3P49761 638 aaKnown RBP13.36□□□□□ -0.27
NIPAL3-202ENST00000339255 RPP38P78345 283 aaKnown RBP13.36□□□□□ -0.27
NIPAL3-202ENST00000339255 FGFBP1Q14512 234 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms