RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 CTDSP2O14595 271 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 KLF4O43474 513 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 TNFSF14O43557 240 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 LATO43561 262 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 PRKYO43930 277 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 EPPINO95925 133 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 IGHA1P01876 353 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 OR12D1P0DN82 309 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 IL7P13232 177 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 SPNP16150 400 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 CSNK2A2P19784 350 aaPredicted RBP10.07□□□□□ -0.8
RTN3-201ENST00000338850 HIST1H1TP22492 207 aaPredicted RBP10.07□□□□□ -0.8
RTN3-201ENST00000338850 POU1F1P28069 291 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 CD38P28907 300 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 SSR2P43308 183 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 SEPHS1P49903 392 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 OR2B6P58173 313 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 CYP4F2P78329 520 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 RIPPLY1Q0D2K3 151 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 FUT5Q11128 374 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 GINS1Q14691 196 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 SHBQ15464 509 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 SOWAHCQ53LP3 525 aaPredicted RBP10.07□□□□□ -0.8
RTN3-201ENST00000338850 HEPHL1Q6MZM0 1159 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 SLC48A1Q6P1K1 146 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 ABHD17CQ6PCB6 329 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 ZNF517Q6ZMY9 492 aaPredicted RBP10.07□□□□□ -0.8
RTN3-201ENST00000338850 TMPRSS7Q7RTY8 843 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 LIX1LQ8IVB5 337 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 RDH10Q8IZV5 341 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 MMP21Q8N119 569 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 LINC01555Q8NAE3 123 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 MFSD9Q8NBP5 474 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 OR2A1Q8NGT9 310 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 ACOT11Q8WXI4 607 aaPredicted RBP10.07□□□□□ -0.8
RTN3-201ENST00000338850 OSTF1Q92882 214 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 UFD1Q92890 307 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 EXOSC8Q96B26 276 aaKnown RBP10.07□□□□□ -0.8
RTN3-201ENST00000338850 MS4A6EQ96DS6 147 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 SCARF2Q96GP6 870 aaPredicted RBP10.07□□□□□ -0.8
RTN3-201ENST00000338850 INSM2Q96T92 566 aaPredicted RBP10.07□□□□□ -0.8
RTN3-201ENST00000338850 ELF4Q99607 663 aaPredicted RBP10.07□□□□□ -0.8
RTN3-201ENST00000338850 SOSTQ9BQB4 213 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 ARHGAP9Q9BRR9 750 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 ROGDIQ9GZN7 287 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 FN3KQ9H479 309 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 RNF167Q9H6Y7 350 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 ANKRA2Q9H9E1 313 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 KRCC1Q9NPI7 259 aaPredicted RBP10.07□□□□□ -0.8
RTN3-201ENST00000338850 PRDM8Q9NQV8 689 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 PHPT1Q9NRX4 125 aaPredicted RBP10.07□□□□□ -0.8
RTN3-201ENST00000338850 RHCGQ9UBD6 479 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 ZNF221Q9UK13 617 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 CES1P1Q9UKY3 287 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 ENTPD4Q9Y227 616 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 HEBP2Q9Y5Z4 205 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 APC2O95996 2303 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 SPEGQ15772 3267 aa10.07□□□□□ -0.8
RTN3-201ENST00000338850 ASPMQ8IZT6 3477 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 ITPR1Q14643 2758 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 TBC1D3DA0A087WVF3 549 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 TBC1D3IA0A087WXS9 549 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 TBC1D3EA0A087X179 549 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 TBC1D3KA0A087X1G2 549 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 TBC1D3FA6NER0 549 aaPredicted RBP10.06□□□□□ -0.8
RTN3-201ENST00000338850 TBC1D3LB9A6J9 549 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 FAM227AF5H4B4 570 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 M0R129 80 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 RTCAO00442 366 aaKnown RBP10.06□□□□□ -0.8
RTN3-201ENST00000338850 PROM1O43490 865 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 PLRG1O43660 514 aaKnown RBP10.06□□□□□ -0.8
RTN3-201ENST00000338850 OR1F1O43749 312 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 AKAP8O43823 692 aaKnown RBP10.06□□□□□ -0.8
RTN3-201ENST00000338850 HMGN1P05114 100 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 ALPPP05187 535 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 KRT8P05787 483 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 THBS1P07996 1170 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 CHRM4P08173 479 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 GUSBP08236 651 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 HOXC4P09017 264 aaPredicted RBP10.06□□□□□ -0.8
RTN3-201ENST00000338850 TBC1D3HP0C7X1 549 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 GSTT2P0CG29 244 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 GSTT2BP0CG30 244 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 F3P13726 295 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 FUT4P22083 530 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 SDC2P34741 201 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 GPC1P35052 558 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 MLLT3P42568 568 aaPredicted RBP10.06□□□□□ -0.8
RTN3-201ENST00000338850 CLCNKAP51800 687 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 NCBP2P52298 156 aaKnown RBP eCLIP10.06□□□□□ -0.8
RTN3-201ENST00000338850 CASP9P55211 416 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 NXPH1P58417 271 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 RPS26P62854 115 aaKnown RBP10.06□□□□□ -0.8
RTN3-201ENST00000338850 HYAL2Q12891 473 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 DSG2Q14126 1118 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 DOC2BQ14184 412 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 SYPL1Q16563 259 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 ZNF628Q5EBL2 1059 aa10.06□□□□□ -0.8
RTN3-201ENST00000338850 EXOSC6Q5RKV6 272 aaKnown RBP10.06□□□□□ -0.8
RTN3-201ENST00000338850 AGBL4Q5VU57 503 aa10.06□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms