RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 LIX1LQ8IVB5 337 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 COX18Q8N8Q8 333 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 LINC00052Q96N35 136 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 ZNF582Q96NG8 517 aaPredicted RBP12.49□□□□□ -0.41
COL2A1-201ENST00000337299 EIF5A2Q9GZV4 153 aaKnown RBP12.49□□□□□ -0.41
COL2A1-201ENST00000337299 RNF32Q9H0A6 362 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 ACTL8Q9H568 366 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 CYB5R1Q9UHQ9 305 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 PCDHGA2Q9Y5H1 932 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 SCN9AQ15858 1988 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 OR6C65A6NJZ3 312 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 STMND1H3BQB6 276 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 H7BY64 318 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 SYN3O14994 580 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 TPOP07202 933 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 PPP3CBP16298 524 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 HOXA9P31269 272 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 CTNNB1P35222 781 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 DGCR2P98153 550 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 GAB1Q13480 694 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 AGMOQ6ZNB7 445 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 MSANTD1Q6ZTZ1 278 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 NUDT18Q6ZVK8 323 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 Q6ZVU0 165 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 GID4Q8IVV7 300 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 C16orf78Q8WTQ4 265 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 ARL11Q969Q4 196 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 PRAP1Q96NZ9 151 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 C12orf10Q9HB07 376 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 TDP1Q9NUW8 608 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 CALML5Q9NZT1 146 aa12.49□□□□□ -0.41
COL2A1-201ENST00000337299 TCRBV16S1A1N1A0A5B0 115 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 TRABD2BA6NFA1 517 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 FAM171A2A8MVW0 826 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 AMY2AP04746 511 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 SNRNP70P08621 437 aaKnown RBP12.48□□□□□ -0.41
COL2A1-201ENST00000337299 UGT2B7P16662 529 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 CSNK2A2P19784 350 aaPredicted RBP12.48□□□□□ -0.41
COL2A1-201ENST00000337299 ANXA7P20073 488 aaKnown RBP12.48□□□□□ -0.41
COL2A1-201ENST00000337299 AGTR1P30556 359 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 EVX1P49640 407 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 C19orf57Q0VDD7 668 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 FAAP20Q6NZ36 180 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 LIPIQ6XZB0 460 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 MSRB3Q8IXL7 192 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 CPA6Q8N4T0 437 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 THEM6Q8WUY1 208 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 PMM1Q92871 262 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 GCDHQ92947 438 aaPredicted RBP12.48□□□□□ -0.41
COL2A1-201ENST00000337299 KIAA1143Q96AT1 154 aaPredicted RBP12.48□□□□□ -0.41
COL2A1-201ENST00000337299 C1QTNF7Q9BXJ2 289 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 NKX6-2Q9C056 277 aaPredicted RBP12.48□□□□□ -0.41
COL2A1-201ENST00000337299 ATG5Q9H1Y0 275 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 NAALAD2Q9Y3Q0 740 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 WDR45Q9Y484 360 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 TAPBPO15533 448 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 HRO43593 1189 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 PRAF2O60831 178 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 TGM6O95932 706 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 SYPL1Q16563 259 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 PLPP4Q5VZY2 271 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 SFXN4Q6P4A7 337 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 TPRG1Q6ZUI0 275 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.48□□□□□ -0.41
COL2A1-201ENST00000337299 ZMYND19Q96E35 227 aaPredicted RBP12.48□□□□□ -0.41
COL2A1-201ENST00000337299 GPER1Q99527 375 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 BABAM2Q9NXR7 383 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 NLGN3Q9NZ94 848 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 TRIP11Q15643 1979 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 GPR37L1O60883 481 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 RGS19P49795 217 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 CAPZA1P52907 286 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 BTG1P62324 171 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 KCNJ10P78508 379 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 ID2Q02363 134 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 ZNHIT3Q15649 155 aaPredicted RBP12.48□□□□□ -0.41
COL2A1-201ENST00000337299 ZDHHC20Q5W0Z9 365 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 BTN2A1Q7KYR7 527 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 ZNF227Q86WZ6 799 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 WDSUB1Q8N9V3 476 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 FBXO22Q8NEZ5 403 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 PXT1Q8NFP0 134 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 OR8D4Q8NGM9 314 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 C4orf36Q96KX1 117 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 ZNF354BQ96LW1 612 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 A0A0B4J203 849 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 LOC105371267A0A1B0GV96 52 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 LDOC1O95751 146 aaPredicted RBP12.48□□□□□ -0.41
COL2A1-201ENST00000337299 ADRB1P08588 477 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 AKR1C4P17516 323 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 ART1P52961 327 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 TBPL1P62380 186 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 SP140Q13342 867 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 INSL4Q14641 139 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 PUS10Q3MIT2 529 aaKnown RBP12.48□□□□□ -0.41
COL2A1-201ENST00000337299 GLT8D1Q68CQ7 371 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 FCRLAQ7L513 359 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 GPR26Q8NDV2 337 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 OR2L3Q8NG85 312 aa12.48□□□□□ -0.41
COL2A1-201ENST00000337299 LINC01599Q8WXQ3 324 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms