RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 LAG3P18627 525 aa17.03■□□□□ 0.32
PKP3-201ENST00000331563 PRKAR1BP31321 381 aa17.03■□□□□ 0.32
PKP3-201ENST00000331563 NSG1P42857 185 aa17.03■□□□□ 0.32
PKP3-201ENST00000331563 SLC1A3P43003 542 aa17.03■□□□□ 0.32
PKP3-201ENST00000331563 MAZP56270 477 aaKnown RBP17.03■□□□□ 0.32
PKP3-201ENST00000331563 LYPLAL1Q5VWZ2 237 aa17.03■□□□□ 0.32
PKP3-201ENST00000331563 SLC36A4Q6YBV0 504 aa17.03■□□□□ 0.32
PKP3-201ENST00000331563 VRK3Q8IV63 474 aa17.03■□□□□ 0.32
PKP3-201ENST00000331563 ARIH2OSQ8N7S6 290 aa17.03■□□□□ 0.32
PKP3-201ENST00000331563 WDR20Q8TBZ3 569 aa17.03■□□□□ 0.32
PKP3-201ENST00000331563 ISYNA1Q9NPH2 558 aa17.03■□□□□ 0.32
PKP3-201ENST00000331563 CTPS2Q9NRF8 586 aa17.03■□□□□ 0.32
PKP3-201ENST00000331563 CFAP97Q9P2B7 532 aa17.03■□□□□ 0.32
PKP3-201ENST00000331563 FBXW2Q9UKT8 454 aa17.03■□□□□ 0.32
PKP3-201ENST00000331563 PRR23D1E9PI22 279 aaPredicted RBP17.02■□□□□ 0.32
PKP3-201ENST00000331563 GREM1O60565 184 aa17.02■□□□□ 0.32
PKP3-201ENST00000331563 PRR23D2P0DMB1 279 aaPredicted RBP17.02■□□□□ 0.32
PKP3-201ENST00000331563 POU3F2P20265 443 aaPredicted RBP17.02■□□□□ 0.32
PKP3-201ENST00000331563 HLA-FP30511 346 aa17.02■□□□□ 0.32
PKP3-201ENST00000331563 TIA1P31483 386 aaKnown RBP eCLIP17.02■□□□□ 0.32
PKP3-201ENST00000331563 OPRD1P41143 372 aa17.02■□□□□ 0.32
PKP3-201ENST00000331563 C21orf58P58505 322 aa17.02■□□□□ 0.32
PKP3-201ENST00000331563 PFN3P60673 137 aa17.02■□□□□ 0.32
PKP3-201ENST00000331563 SP140Q13342 867 aa17.02■□□□□ 0.32
PKP3-201ENST00000331563 TSTA3Q13630 321 aaPredicted RBP17.02■□□□□ 0.32
PKP3-201ENST00000331563 SLC27A4Q6P1M0 643 aa17.02■□□□□ 0.32
PKP3-201ENST00000331563 MTFR2Q6P444 385 aa17.02■□□□□ 0.32
PKP3-201ENST00000331563 KLBQ86Z14 1044 aa17.02■□□□□ 0.32
PKP3-201ENST00000331563 TCEAL8Q8IYN2 117 aa17.02■□□□□ 0.32
PKP3-201ENST00000331563 PIGKQ92643 395 aa17.02■□□□□ 0.32
PKP3-201ENST00000331563 ZNF768Q9H5H4 540 aaKnown RBP17.02■□□□□ 0.32
PKP3-201ENST00000331563 BIN3Q9NQY0 253 aa17.02■□□□□ 0.32
PKP3-201ENST00000331563 GSN-AS1Q9NRJ2 163 aa17.02■□□□□ 0.32
PKP3-201ENST00000331563 NDRG3Q9UGV2 375 aa17.02■□□□□ 0.32
PKP3-201ENST00000331563 RASD1Q9Y272 281 aa17.02■□□□□ 0.32
PKP3-201ENST00000331563 RAB19A4D1S5 217 aa17.02■□□□□ 0.32
PKP3-201ENST00000331563 AIPO00170 330 aa17.02■□□□□ 0.32
PKP3-201ENST00000331563 SEMA7AO75326 666 aa17.02■□□□□ 0.32
PKP3-201ENST00000331563 NMBP08949 121 aa17.02■□□□□ 0.32
PKP3-201ENST00000331563 RBMS1P29558 406 aaKnown RBP17.02■□□□□ 0.32
PKP3-201ENST00000331563 CCR2P41597 374 aa17.02■□□□□ 0.32
PKP3-201ENST00000331563 KIAA1161Q6NSJ0 714 aa17.02■□□□□ 0.32
PKP3-201ENST00000331563 BMPERQ8N8U9 685 aa17.02■□□□□ 0.32
PKP3-201ENST00000331563 ASB11Q8WXH4 323 aa17.02■□□□□ 0.32
PKP3-201ENST00000331563 FGF20Q9NP95 211 aaPredicted RBP17.02■□□□□ 0.32
PKP3-201ENST00000331563 BABAM2Q9NXR7 383 aa17.02■□□□□ 0.32
PKP3-201ENST00000331563 CHURC1-FNTBB4DL54 471 aa17.02■□□□□ 0.31
PKP3-201ENST00000331563 SGCEO43556 437 aa17.02■□□□□ 0.31
PKP3-201ENST00000331563 HPXP02790 462 aa17.02■□□□□ 0.31
PKP3-201ENST00000331563 VIPR1P32241 457 aa17.02■□□□□ 0.31
PKP3-201ENST00000331563 RPS13P62277 151 aaKnown RBP17.02■□□□□ 0.31
PKP3-201ENST00000331563 CLEC12AQ5QGZ9 265 aa17.02■□□□□ 0.31
PKP3-201ENST00000331563 ZNF697Q5TEC3 545 aa17.02■□□□□ 0.31
PKP3-201ENST00000331563 PLPP4Q5VZY2 271 aa17.02■□□□□ 0.31
PKP3-201ENST00000331563 CAMKMTQ7Z624 323 aa17.02■□□□□ 0.31
PKP3-201ENST00000331563 FGD2Q7Z6J4 655 aa17.02■□□□□ 0.31
PKP3-201ENST00000331563 IQCHQ86VS3 1027 aa17.02■□□□□ 0.31
PKP3-201ENST00000331563 THOC6Q86W42 341 aaKnown RBP17.02■□□□□ 0.31
PKP3-201ENST00000331563 NANPQ8TBE9 248 aa17.02■□□□□ 0.31
PKP3-201ENST00000331563 OVCA2Q8WZ82 227 aa17.02■□□□□ 0.31
PKP3-201ENST00000331563 NSMAFQ92636 917 aa17.02■□□□□ 0.31
PKP3-201ENST00000331563 TRMT2BQ96GJ1 504 aaKnown RBP17.02■□□□□ 0.31
PKP3-201ENST00000331563 A0A1W2PRB8 838 aa17.01■□□□□ 0.31
PKP3-201ENST00000331563 ANKDD1BA6NHY2 528 aa17.01■□□□□ 0.31
PKP3-201ENST00000331563 LRRC72A6NJI9 287 aa17.01■□□□□ 0.31
PKP3-201ENST00000331563 CHST10O43529 356 aa17.01■□□□□ 0.31
PKP3-201ENST00000331563 TFP02787 698 aa17.01■□□□□ 0.31
PKP3-201ENST00000331563 C8AP07357 584 aa17.01■□□□□ 0.31
PKP3-201ENST00000331563 ADRB1P08588 477 aa17.01■□□□□ 0.31
PKP3-201ENST00000331563 MMP11P24347 488 aa17.01■□□□□ 0.31
PKP3-201ENST00000331563 ZP1P60852 638 aa17.01■□□□□ 0.31
PKP3-201ENST00000331563 LSM11P83369 360 aaKnown RBP eCLIP17.01■□□□□ 0.31
PKP3-201ENST00000331563 NAE1Q13564 534 aa17.01■□□□□ 0.31
PKP3-201ENST00000331563 PODNL1Q6PEZ8 512 aa17.01■□□□□ 0.31
PKP3-201ENST00000331563 OAFQ86UD1 273 aa17.01■□□□□ 0.31
PKP3-201ENST00000331563 PAQR7Q86WK9 346 aa17.01■□□□□ 0.31
PKP3-201ENST00000331563 NR2C2APQ86WQ0 139 aa17.01■□□□□ 0.31
PKP3-201ENST00000331563 SPRYD4Q8WW59 207 aaPredicted RBP17.01■□□□□ 0.31
PKP3-201ENST00000331563 TCEAL4Q96EI5 215 aa17.01■□□□□ 0.31
PKP3-201ENST00000331563 KLHL1Q9NR64 748 aa17.01■□□□□ 0.31
PKP3-201ENST00000331563 ERVK-19Q9WJR5 959 aa17.01■□□□□ 0.31
PKP3-201ENST00000331563 EFCAB14O75071 495 aa17.01■□□□□ 0.31
PKP3-201ENST00000331563 SPAM1P38567 509 aa17.01■□□□□ 0.31
PKP3-201ENST00000331563 SMAD2Q15796 467 aaKnown RBP17.01■□□□□ 0.31
PKP3-201ENST00000331563 SWI5Q1ZZU3 235 aa17.01■□□□□ 0.31
PKP3-201ENST00000331563 JAZF1Q86VZ6 243 aa17.01■□□□□ 0.31
PKP3-201ENST00000331563 KLHL36Q8N4N3 616 aa17.01■□□□□ 0.31
PKP3-201ENST00000331563 RAB8BQ92930 207 aa17.01■□□□□ 0.31
PKP3-201ENST00000331563 EGLN3Q9H6Z9 239 aa17.01■□□□□ 0.31
PKP3-201ENST00000331563 SERTM1A2A2V5 107 aa17■□□□□ 0.31
PKP3-201ENST00000331563 GATBO75879 557 aaKnown RBP17■□□□□ 0.31
PKP3-201ENST00000331563 CH25HO95992 272 aa17■□□□□ 0.31
PKP3-201ENST00000331563 H2AFB1P0C5Y9 115 aa17■□□□□ 0.31
PKP3-201ENST00000331563 ZNF8P17098 575 aaPredicted RBP17■□□□□ 0.31
PKP3-201ENST00000331563 GAS1P54826 345 aa17■□□□□ 0.31
PKP3-201ENST00000331563 CDH11P55287 796 aa17■□□□□ 0.31
PKP3-201ENST00000331563 SMIM11AP58511 58 aa17■□□□□ 0.31
PKP3-201ENST00000331563 DEFA5Q01523 94 aa17■□□□□ 0.31
PKP3-201ENST00000331563 ZNF763Q0D2J5 394 aa17■□□□□ 0.31
PKP3-201ENST00000331563 SLC36A2Q495M3 483 aa17■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms