RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 TIMP3P35625 211 aa25.07■■□□□ 1.6
ATPAF1-201ENST00000329231 POU6F2P78424 691 aaPredicted RBP25.07■■□□□ 1.6
ATPAF1-201ENST00000329231 C17orf67Q0P5P2 114 aa25.07■■□□□ 1.6
ATPAF1-201ENST00000329231 RCAN2Q14206 197 aa25.07■■□□□ 1.6
ATPAF1-201ENST00000329231 GANABQ14697 944 aaKnown RBP25.07■■□□□ 1.6
ATPAF1-201ENST00000329231 CDC73Q6P1J9 531 aa25.07■■□□□ 1.6
ATPAF1-201ENST00000329231 BHLHB9Q6PI77 547 aa25.07■■□□□ 1.6
ATPAF1-201ENST00000329231 FIGNL1Q6PIW4 674 aa25.07■■□□□ 1.6
ATPAF1-201ENST00000329231 SEM1Q6ZVN7 128 aa25.07■■□□□ 1.6
ATPAF1-201ENST00000329231 GALNT10Q86SR1 603 aa25.07■■□□□ 1.6
ATPAF1-201ENST00000329231 ZPLD1Q8TCW7 415 aa25.07■■□□□ 1.6
ATPAF1-201ENST00000329231 G6PC3Q9BUM1 346 aa25.07■■□□□ 1.6
ATPAF1-201ENST00000329231 BTBD2Q9BX70 525 aa25.07■■□□□ 1.6
ATPAF1-201ENST00000329231 ACTRT3Q9BYD9 372 aa25.07■■□□□ 1.6
ATPAF1-201ENST00000329231 RTN4RQ9BZR6 473 aa25.07■■□□□ 1.6
ATPAF1-201ENST00000329231 ENKD1Q9H0I2 346 aa25.07■■□□□ 1.6
ATPAF1-201ENST00000329231 PIGUQ9H490 435 aa25.07■■□□□ 1.6
ATPAF1-201ENST00000329231 MED11Q9P086 117 aa25.07■■□□□ 1.6
ATPAF1-201ENST00000329231 CELSR2Q9HCU4 2923 aa25.06■■□□□ 1.6
ATPAF1-201ENST00000329231 CD8B2A6NJW9 211 aa25.06■■□□□ 1.6
ATPAF1-201ENST00000329231 TRPC5OSA6NMA1 111 aa25.06■■□□□ 1.6
ATPAF1-201ENST00000329231 B4DXG7 233 aa25.06■■□□□ 1.6
ATPAF1-201ENST00000329231 HDAC3O15379 428 aa25.06■■□□□ 1.6
ATPAF1-201ENST00000329231 ANGPTL1O95841 491 aa25.06■■□□□ 1.6
ATPAF1-201ENST00000329231 PRF1P14222 555 aa25.06■■□□□ 1.6
ATPAF1-201ENST00000329231 CHMP24386 653 aa25.06■■□□□ 1.6
ATPAF1-201ENST00000329231 HBA1P69905 142 aa25.06■■□□□ 1.6
ATPAF1-201ENST00000329231 TFF3Q07654 80 aa25.06■■□□□ 1.6
ATPAF1-201ENST00000329231 SLC25A35Q3KQZ1 300 aa25.06■■□□□ 1.6
ATPAF1-201ENST00000329231 OR4F3Q6IEY1 312 aa25.06■■□□□ 1.6
ATPAF1-201ENST00000329231 OGFOD2Q6N063 350 aa25.06■■□□□ 1.6
ATPAF1-201ENST00000329231 OR8J2Q8NGG1 315 aa25.06■■□□□ 1.6
ATPAF1-201ENST00000329231 OTUB1Q96FW1 271 aaPredicted RBP25.06■■□□□ 1.6
ATPAF1-201ENST00000329231 TRIB1Q96RU8 372 aa25.06■■□□□ 1.6
ATPAF1-201ENST00000329231 ACBD3Q9H3P7 528 aa25.06■■□□□ 1.6
ATPAF1-201ENST00000329231 CALHM2Q9HA72 323 aa25.06■■□□□ 1.6
ATPAF1-201ENST00000329231 RPH3AQ9Y2J0 694 aaPredicted RBP25.06■■□□□ 1.6
ATPAF1-201ENST00000329231 ALG1L2C9J202 215 aa25.05■■□□□ 1.6
ATPAF1-201ENST00000329231 SLCO1B7G3V0H7 640 aa25.05■■□□□ 1.6
ATPAF1-201ENST00000329231 RNASET2O00584 256 aaKnown RBP25.05■■□□□ 1.6
ATPAF1-201ENST00000329231 KLF11O14901 512 aa25.05■■□□□ 1.6
ATPAF1-201ENST00000329231 IL2RAP01589 272 aa25.05■■□□□ 1.6
ATPAF1-201ENST00000329231 TBXA2RP21731 343 aa25.05■■□□□ 1.6
ATPAF1-201ENST00000329231 CEACAM8P31997 349 aaPredicted RBP25.05■■□□□ 1.6
ATPAF1-201ENST00000329231 CLNS1AP54105 237 aaKnown RBP25.05■■□□□ 1.6
ATPAF1-201ENST00000329231 APOOLQ6UXV4 268 aa25.05■■□□□ 1.6
ATPAF1-201ENST00000329231 ACBD4Q8NC06 268 aa25.05■■□□□ 1.6
ATPAF1-201ENST00000329231 OR4C3Q8NH37 302 aa25.05■■□□□ 1.6
ATPAF1-201ENST00000329231 ADAMTS15Q8TE58 950 aa25.05■■□□□ 1.6
ATPAF1-201ENST00000329231 TESCQ96BS2 214 aa25.05■■□□□ 1.6
ATPAF1-201ENST00000329231 GPATCH2Q9NW75 528 aa25.05■■□□□ 1.6
ATPAF1-201ENST00000329231 PCDHGB4Q9UN71 923 aa25.05■■□□□ 1.6
ATPAF1-201ENST00000329231 PKDREJQ9NTG1 2253 aa25.04■■□□□ 1.6
ATPAF1-201ENST00000329231 IGLV3-32A0A0A0MS00 114 aa25.04■■□□□ 1.6
ATPAF1-201ENST00000329231 H0Y3Z8 333 aa25.04■■□□□ 1.6
ATPAF1-201ENST00000329231 SDHDO14521 159 aa25.04■■□□□ 1.6
ATPAF1-201ENST00000329231 OXSR1O95747 527 aaPredicted RBP25.04■■□□□ 1.6
ATPAF1-201ENST00000329231 HPGDP15428 266 aa25.04■■□□□ 1.6
ATPAF1-201ENST00000329231 HK1P19367 917 aa25.04■■□□□ 1.6
ATPAF1-201ENST00000329231 TCEA1P23193 301 aaKnown RBP25.04■■□□□ 1.6
ATPAF1-201ENST00000329231 MSX1P28360 303 aa25.04■■□□□ 1.6
ATPAF1-201ENST00000329231 SOAT1P35610 550 aa25.04■■□□□ 1.6
ATPAF1-201ENST00000329231 SRYQ05066 204 aa25.04■■□□□ 1.6
ATPAF1-201ENST00000329231 DPY19L1Q2PZI1 675 aa25.04■■□□□ 1.6
ATPAF1-201ENST00000329231 MEX3BQ6ZN04 569 aaKnown RBP25.04■■□□□ 1.6
ATPAF1-201ENST00000329231 GDF7Q7Z4P5 450 aa25.04■■□□□ 1.6
ATPAF1-201ENST00000329231 VPS37AQ8NEZ2 397 aa25.04■■□□□ 1.6
ATPAF1-201ENST00000329231 TNIP2Q8NFZ5 429 aa25.04■■□□□ 1.6
ATPAF1-201ENST00000329231 CDS1Q92903 461 aa25.04■■□□□ 1.6
ATPAF1-201ENST00000329231 UBQLN4Q9NRR5 601 aa25.04■■□□□ 1.6
ATPAF1-201ENST00000329231 MARCOQ9UEW3 520 aaPredicted RBP25.04■■□□□ 1.6
ATPAF1-201ENST00000329231 KDM4EB2RXH2 506 aaPredicted RBP25.03■■□□□ 1.6
ATPAF1-201ENST00000329231 ANKRD28O15084 1053 aa25.03■■□□□ 1.6
ATPAF1-201ENST00000329231 NDUFB5O43674 189 aa25.03■■□□□ 1.6
ATPAF1-201ENST00000329231 KITP10721 976 aa25.03■■□□□ 1.6
ATPAF1-201ENST00000329231 STARP49675 285 aa25.03■■□□□ 1.6
ATPAF1-201ENST00000329231 LHX2P50458 406 aa25.03■■□□□ 1.6
ATPAF1-201ENST00000329231 WNT3P56703 355 aa25.03■■□□□ 1.6
ATPAF1-201ENST00000329231 PPP2R2AP63151 447 aa25.03■■□□□ 1.6
ATPAF1-201ENST00000329231 OCRLQ01968 901 aa25.03■■□□□ 1.6
ATPAF1-201ENST00000329231 CCNJQ5T5M9 372 aa25.03■■□□□ 1.6
ATPAF1-201ENST00000329231 ANXA8L1Q5VT79 327 aa25.03■■□□□ 1.6
ATPAF1-201ENST00000329231 SPATA19Q7Z5L4 167 aa25.03■■□□□ 1.6
ATPAF1-201ENST00000329231 LIX1LQ8IVB5 337 aa25.03■■□□□ 1.6
ATPAF1-201ENST00000329231 WDR75Q8IWA0 830 aaKnown RBP25.03■■□□□ 1.6
ATPAF1-201ENST00000329231 CLECL1Q8IZS7 167 aa25.03■■□□□ 1.6
ATPAF1-201ENST00000329231 OR5AK3PQ8NH89 298 aa25.03■■□□□ 1.6
ATPAF1-201ENST00000329231 ZNF75CPQ92670 426 aaPredicted RBP25.03■■□□□ 1.6
ATPAF1-201ENST00000329231 C1GALT1C1Q96EU7 318 aa25.03■■□□□ 1.6
ATPAF1-201ENST00000329231 NPDC1Q9NQX5 325 aaPredicted RBP25.03■■□□□ 1.6
ATPAF1-201ENST00000329231 FBXO34Q9NWN3 711 aa25.03■■□□□ 1.6
ATPAF1-201ENST00000329231 ARHGAP21Q5T5U3 1957 aa25.02■■□□□ 1.6
ATPAF1-201ENST00000329231 MBD3L4A6NDZ8 208 aaPredicted RBP25.02■■□□□ 1.6
ATPAF1-201ENST00000329231 MBD3L3A6NE82 208 aaPredicted RBP25.02■■□□□ 1.6
ATPAF1-201ENST00000329231 MBD3L5A6NJ08 208 aaPredicted RBP25.02■■□□□ 1.6
ATPAF1-201ENST00000329231 DVL2O14641 736 aa25.02■■□□□ 1.6
ATPAF1-201ENST00000329231 ATP6V1C1P21283 382 aa25.02■■□□□ 1.6
ATPAF1-201ENST00000329231 B3GALT5-AS1P59052 145 aa25.02■■□□□ 1.6
ATPAF1-201ENST00000329231 BCL2A1Q16548 175 aa25.02■■□□□ 1.6
ATPAF1-201ENST00000329231 RAET1LQ5VY80 246 aa25.02■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms