RNA–Protein interactions for RNA: ENST00000321117.9

DNMT3A-202, Transcript of DNA methyltransferase 3 alpha, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene DNMT3A, Length 4,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-202ENST00000321117 PRAMEF4O60810 478 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 TACSTD2P09758 323 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 SHC1P29353 583 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 GRK6P43250 576 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 ARHGAP19Q14CB8 494 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 PRAMEF9Q5VWM5 478 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 KRT77Q7Z794 578 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 GLCCI1Q86VQ1 547 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 LRRC25Q8N386 305 aaPredicted RBP11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 CPA6Q8N4T0 437 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 OR4M2Q8NGB6 313 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 OR9A2Q8NGT5 310 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 HS6ST2Q96MM7 605 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 NXF2Q9GZY0 626 aaKnown RBP11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 PTTG3PQ9NZH4 202 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 ZNF638Q14966 1978 aaKnown RBP11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 HMGN4O00479 90 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 RNF13O43567 381 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 CLEC3AO75596 197 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 RHOP08100 348 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 PSMA3P25788 255 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 PTBP1P26599 531 aaKnown RBP eCLIP11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 RBMS1P29558 406 aaKnown RBP11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 PKLRP30613 574 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 EVX1P49640 407 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 OR12D2P58182 307 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 RDH10Q8IZV5 341 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 DOK4Q8TEW6 326 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 GAL3ST1Q99999 423 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 RBCK1Q9BYM8 510 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 GLIPR2Q9H4G4 154 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 ASB6Q9NWX5 421 aa11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 MRPS33Q9Y291 106 aaKnown RBP11.97□□□□□ -0.49
DNMT3A-202ENST00000321117 ZNF236Q9UL36 1845 aa11.96□□□□□ -0.49
DNMT3A-202ENST00000321117 PIKFYVEQ9Y2I7 2098 aa11.96□□□□□ -0.49
DNMT3A-202ENST00000321117 ADRB3P13945 408 aa11.96□□□□□ -0.49
DNMT3A-202ENST00000321117 TRIM23P36406 574 aa11.96□□□□□ -0.49
DNMT3A-202ENST00000321117 TMEM69Q5SWH9 247 aa11.96□□□□□ -0.49
DNMT3A-202ENST00000321117 WDR53Q7Z5U6 358 aaPredicted RBP11.96□□□□□ -0.49
DNMT3A-202ENST00000321117 TCTE3Q8IZS6 198 aa11.96□□□□□ -0.49
DNMT3A-202ENST00000321117 ACOT4Q8N9L9 421 aa11.96□□□□□ -0.49
DNMT3A-202ENST00000321117 KCT2Q8NC54 265 aa11.96□□□□□ -0.49
DNMT3A-202ENST00000321117 TOR1AIP2Q8NFQ8 470 aa11.96□□□□□ -0.49
DNMT3A-202ENST00000321117 C16orf58Q96GQ5 468 aa11.96□□□□□ -0.49
DNMT3A-202ENST00000321117 OR7D2Q96RA2 312 aa11.96□□□□□ -0.49
DNMT3A-202ENST00000321117 B3GNT2Q9NY97 397 aa11.96□□□□□ -0.49
DNMT3A-202ENST00000321117 RGS17Q9UGC6 210 aaPredicted RBP11.96□□□□□ -0.49
DNMT3A-202ENST00000321117 KNL1Q8NG31 2342 aa11.96□□□□□ -0.49
DNMT3A-202ENST00000321117 A0A087WUU8 490 aa11.96□□□□□ -0.49
DNMT3A-202ENST00000321117 CREBL2O60519 120 aaPredicted RBP11.96□□□□□ -0.49
DNMT3A-202ENST00000321117 RP2O75695 350 aa11.96□□□□□ -0.49
DNMT3A-202ENST00000321117 KRT33AO76009 404 aa11.96□□□□□ -0.49
DNMT3A-202ENST00000321117 TRA2BP62995 288 aaKnown RBP11.96□□□□□ -0.49
DNMT3A-202ENST00000321117 IRF3Q14653 427 aa11.96□□□□□ -0.49
DNMT3A-202ENST00000321117 P2RY14Q15391 338 aa11.96□□□□□ -0.49
DNMT3A-202ENST00000321117 DUSP6Q16828 381 aa11.96□□□□□ -0.49
DNMT3A-202ENST00000321117 C12orf73Q69YU5 71 aa11.96□□□□□ -0.49
DNMT3A-202ENST00000321117 GRASPQ7Z6J2 395 aaPredicted RBP11.96□□□□□ -0.49
DNMT3A-202ENST00000321117 PARGQ86W56 976 aa11.96□□□□□ -0.49
DNMT3A-202ENST00000321117 OR4M1Q8NGD0 313 aa11.96□□□□□ -0.49
DNMT3A-202ENST00000321117 PCNPQ8WW12 178 aaKnown RBP11.96□□□□□ -0.49
DNMT3A-202ENST00000321117 ALG14Q96F25 216 aa11.96□□□□□ -0.49
DNMT3A-202ENST00000321117 ELMOD3Q96FG2 381 aa11.96□□□□□ -0.49
DNMT3A-202ENST00000321117 RBM18Q96H35 190 aaKnown RBP11.96□□□□□ -0.49
DNMT3A-202ENST00000321117 HSPA12BQ96MM6 686 aa11.96□□□□□ -0.49
DNMT3A-202ENST00000321117 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.96□□□□□ -0.494e-7■■■■□ 21.1
DNMT3A-202ENST00000321117 MED17Q9NVC6 651 aa11.96□□□□□ -0.49
DNMT3A-202ENST00000321117 HCFC1R1Q9NWW0 138 aa11.96□□□□□ -0.49
DNMT3A-202ENST00000321117 GLTPQ9NZD2 209 aa11.96□□□□□ -0.49
DNMT3A-202ENST00000321117 SLC6A14Q9UN76 642 aa11.96□□□□□ -0.49
DNMT3A-202ENST00000321117 GPR34Q9UPC5 381 aa11.96□□□□□ -0.49
DNMT3A-202ENST00000321117 AK6Q9Y3D8 172 aaKnown RBP11.96□□□□□ -0.49
DNMT3A-202ENST00000321117 HEBP2Q9Y5Z4 205 aa11.96□□□□□ -0.49
DNMT3A-202ENST00000321117 DOCK3Q8IZD9 2030 aa11.96□□□□□ -0.5
DNMT3A-202ENST00000321117 RALGAPA2Q2PPJ7 1873 aa11.96□□□□□ -0.5
DNMT3A-202ENST00000321117 A0A0G2JMZ2 1700 aa11.96□□□□□ -0.5
DNMT3A-202ENST00000321117 LRRC37A2A6NM11 1700 aa11.96□□□□□ -0.5
DNMT3A-202ENST00000321117 SOCS6O14544 535 aa11.96□□□□□ -0.5
DNMT3A-202ENST00000321117 FZD7O75084 574 aa11.96□□□□□ -0.5
DNMT3A-202ENST00000321117 PAK4O96013 591 aaPredicted RBP11.96□□□□□ -0.5
DNMT3A-202ENST00000321117 FCER2P06734 321 aa11.96□□□□□ -0.5
DNMT3A-202ENST00000321117 CERS1P27544 350 aa11.96□□□□□ -0.5
DNMT3A-202ENST00000321117 SOX2P48431 317 aa11.96□□□□□ -0.5
DNMT3A-202ENST00000321117 MTNR1BP49286 362 aa11.96□□□□□ -0.5
DNMT3A-202ENST00000321117 VSX2P58304 361 aaPredicted RBP11.96□□□□□ -0.5
DNMT3A-202ENST00000321117 IFITM2Q01629 132 aa11.96□□□□□ -0.5
DNMT3A-202ENST00000321117 RIPPLY1Q0D2K3 151 aa11.96□□□□□ -0.5
DNMT3A-202ENST00000321117 CAMK1Q14012 370 aa11.96□□□□□ -0.5
DNMT3A-202ENST00000321117 GPR176Q14439 515 aa11.96□□□□□ -0.5
DNMT3A-202ENST00000321117 DHCR24Q15392 516 aa11.96□□□□□ -0.5
DNMT3A-202ENST00000321117 CCDC157Q569K6 752 aa11.96□□□□□ -0.5
DNMT3A-202ENST00000321117 FCRLBQ6BAA4 426 aa11.96□□□□□ -0.5
DNMT3A-202ENST00000321117 OR4N5Q8IXE1 308 aa11.96□□□□□ -0.5
DNMT3A-202ENST00000321117 OR52N1Q8NH53 320 aa11.96□□□□□ -0.5
DNMT3A-202ENST00000321117 MOSPD2Q8NHP6 518 aa11.96□□□□□ -0.5
DNMT3A-202ENST00000321117 SLC22A18Q96BI1 424 aa11.96□□□□□ -0.5
DNMT3A-202ENST00000321117 C1QTNF2Q9BXJ5 285 aa11.96□□□□□ -0.5
DNMT3A-202ENST00000321117 MTIF3Q9H2K0 278 aaKnown RBP11.96□□□□□ -0.5
DNMT3A-202ENST00000321117 MBD2Q9UBB5 411 aa11.96□□□□□ -0.5
DNMT3A-202ENST00000321117 UPB1Q9UBR1 384 aa11.96□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 127.6 ms