RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 ST3GAL3Q11203 375 aa13.74□□□□□ -0.21
CLK4-201ENST00000316308 ZNF791Q3KP31 576 aaPredicted RBP13.74□□□□□ -0.21
CLK4-201ENST00000316308 RRM2BQ7LG56 351 aa13.74□□□□□ -0.21
CLK4-201ENST00000316308 CCDC190Q86UF4 302 aa13.74□□□□□ -0.21
CLK4-201ENST00000316308 CELF2-AS1Q8N7Q2 184 aa13.74□□□□□ -0.21
CLK4-201ENST00000316308 SYT5O00445 386 aa13.74□□□□□ -0.21
CLK4-201ENST00000316308 ASNA1O43681 348 aa13.74□□□□□ -0.21
CLK4-201ENST00000316308 RDH16O75452 317 aa13.74□□□□□ -0.21
CLK4-201ENST00000316308 RFPL3O75679 317 aa13.74□□□□□ -0.21
CLK4-201ENST00000316308 RAB36O95755 333 aa13.74□□□□□ -0.21
CLK4-201ENST00000316308 ST6GAL1P15907 406 aa13.74□□□□□ -0.21
CLK4-201ENST00000316308 MAKP20794 623 aa13.74□□□□□ -0.21
CLK4-201ENST00000316308 PSMA1P25786 263 aaKnown RBP13.74□□□□□ -0.21
CLK4-201ENST00000316308 MTNR1AP48039 350 aa13.74□□□□□ -0.21
CLK4-201ENST00000316308 EEF1A1P68104 462 aaKnown RBP13.74□□□□□ -0.21
CLK4-201ENST00000316308 EIF2B5Q13144 721 aaKnown RBP13.74□□□□□ -0.21
CLK4-201ENST00000316308 FZD5Q13467 585 aa13.74□□□□□ -0.21
CLK4-201ENST00000316308 MRPL2Q5T653 305 aaKnown RBP13.74□□□□□ -0.21
CLK4-201ENST00000316308 DESI1Q6ICB0 168 aa13.74□□□□□ -0.21
CLK4-201ENST00000316308 OR9A4Q8NGU2 314 aa13.74□□□□□ -0.21
CLK4-201ENST00000316308 ASB15Q8WXK1 588 aa13.74□□□□□ -0.21
CLK4-201ENST00000316308 MOAP1Q96BY2 351 aa13.74□□□□□ -0.21
CLK4-201ENST00000316308 NELL2Q99435 816 aa13.74□□□□□ -0.21
CLK4-201ENST00000316308 DTX4Q9Y2E6 619 aa13.74□□□□□ -0.21
CLK4-201ENST00000316308 SHISA3A0PJX4 238 aa13.73□□□□□ -0.21
CLK4-201ENST00000316308 C2CD4DB7Z1M9 353 aa13.73□□□□□ -0.21
CLK4-201ENST00000316308 TGFBR3LH3BV60 316 aa13.73□□□□□ -0.21
CLK4-201ENST00000316308 AP3D1O14617 1153 aa13.73□□□□□ -0.21
CLK4-201ENST00000316308 KLF4O43474 513 aa13.73□□□□□ -0.21
CLK4-201ENST00000316308 SEMA4FO95754 770 aa13.73□□□□□ -0.21
CLK4-201ENST00000316308 DLGAP3O95886 979 aa13.73□□□□□ -0.21
CLK4-201ENST00000316308 PRKAR1BP31321 381 aa13.73□□□□□ -0.21
CLK4-201ENST00000316308 MGAT2Q10469 447 aa13.73□□□□□ -0.21
CLK4-201ENST00000316308 GNA13Q14344 377 aa13.73□□□□□ -0.21
CLK4-201ENST00000316308 USP53Q70EK8 1073 aa13.73□□□□□ -0.21
CLK4-201ENST00000316308 GDPD3Q7L5L3 318 aa13.73□□□□□ -0.21
CLK4-201ENST00000316308 TRIM69Q86WT6 500 aa13.73□□□□□ -0.21
CLK4-201ENST00000316308 GNPDA2Q8TDQ7 276 aa13.73□□□□□ -0.21
CLK4-201ENST00000316308 NACC2Q96BF6 587 aa13.73□□□□□ -0.21
CLK4-201ENST00000316308 RNF31Q96EP0 1072 aa13.73□□□□□ -0.21
CLK4-201ENST00000316308 HINT3Q9NQE9 182 aaKnown RBP13.73□□□□□ -0.21
CLK4-201ENST00000316308 HYKKA2RU49 373 aa13.73□□□□□ -0.21
CLK4-201ENST00000316308 SURF4O15260 269 aa13.73□□□□□ -0.21
CLK4-201ENST00000316308 PRODHO43272 600 aa13.73□□□□□ -0.21
CLK4-201ENST00000316308 NDUFS1P28331 727 aa13.73□□□□□ -0.21
CLK4-201ENST00000316308 SDC2P34741 201 aa13.73□□□□□ -0.21
CLK4-201ENST00000316308 ANXA11P50995 505 aaKnown RBP13.73□□□□□ -0.21
CLK4-201ENST00000316308 PRKCDQ05655 676 aa13.73□□□□□ -0.21
CLK4-201ENST00000316308 ILF3Q12906 894 aaKnown RBP eCLIP13.73□□□□□ -0.21
CLK4-201ENST00000316308 MLLT11Q13015 90 aaPredicted RBP13.73□□□□□ -0.21
CLK4-201ENST00000316308 NNATQ16517 81 aa13.73□□□□□ -0.21
CLK4-201ENST00000316308 BAK1Q16611 211 aa13.73□□□□□ -0.21
CLK4-201ENST00000316308 ARHGAP11BQ3KRB8 267 aa13.73□□□□□ -0.21
CLK4-201ENST00000316308 DCST2Q5T1A1 773 aa13.73□□□□□ -0.21
CLK4-201ENST00000316308 RASSF6Q6ZTQ3 369 aa13.73□□□□□ -0.21
CLK4-201ENST00000316308 ABCA7Q8IZY2 2146 aa13.73□□□□□ -0.21
CLK4-201ENST00000316308 AVL9Q8NBF6 648 aa13.73□□□□□ -0.21
CLK4-201ENST00000316308 BAHD1Q8TBE0 780 aaPredicted RBP13.73□□□□□ -0.21
CLK4-201ENST00000316308 PIGXQ8TBF5 258 aa13.73□□□□□ -0.21
CLK4-201ENST00000316308 ACOT11Q8WXI4 607 aaPredicted RBP13.73□□□□□ -0.21
CLK4-201ENST00000316308 ART5Q96L15 291 aa13.73□□□□□ -0.21
CLK4-201ENST00000316308 ZNF649Q9BS31 505 aa13.73□□□□□ -0.21
CLK4-201ENST00000316308 IL21RQ9HBE5 538 aa13.73□□□□□ -0.21
CLK4-201ENST00000316308 SMURF1Q9HCE7 757 aa13.73□□□□□ -0.21
CLK4-201ENST00000316308 NTMQ9P121 344 aa13.73□□□□□ -0.21
CLK4-201ENST00000316308 STUB1Q9UNE7 303 aa13.73□□□□□ -0.21
CLK4-201ENST00000316308 TAF4O00268 1085 aa13.72□□□□□ -0.21
CLK4-201ENST00000316308 AQP9O43315 295 aa13.72□□□□□ -0.21
CLK4-201ENST00000316308 NCR1O76036 304 aa13.72□□□□□ -0.21
CLK4-201ENST00000316308 HOXC4P09017 264 aaPredicted RBP13.72□□□□□ -0.21
CLK4-201ENST00000316308 ENDOUP21128 410 aaKnown RBP13.72□□□□□ -0.21
CLK4-201ENST00000316308 CDH11P55287 796 aa13.72□□□□□ -0.21
CLK4-201ENST00000316308 MAT1AQ00266 395 aaKnown RBP13.72□□□□□ -0.21
CLK4-201ENST00000316308 FABP5Q01469 135 aa13.72□□□□□ -0.21
CLK4-201ENST00000316308 ZNF79Q15937 498 aa13.72□□□□□ -0.21
CLK4-201ENST00000316308 PRICKLE4Q2TBC4 344 aa13.72□□□□□ -0.21
CLK4-201ENST00000316308 AGAP7PQ5VUJ5 663 aa13.72□□□□□ -0.21
CLK4-201ENST00000316308 THSD4Q6ZMP0 1018 aa13.72□□□□□ -0.21
CLK4-201ENST00000316308 ZNF620Q6ZNG0 422 aa13.72□□□□□ -0.21
CLK4-201ENST00000316308 MRGPREQ86SM8 312 aa13.72□□□□□ -0.21
CLK4-201ENST00000316308 METTL27Q8N6F8 245 aaPredicted RBP13.72□□□□□ -0.21
CLK4-201ENST00000316308 SIRT6Q8N6T7 355 aa13.72□□□□□ -0.21
CLK4-201ENST00000316308 ZNF614Q8N883 585 aa13.72□□□□□ -0.21
CLK4-201ENST00000316308 SLC22A18Q96BI1 424 aa13.72□□□□□ -0.21
CLK4-201ENST00000316308 PPP1R14BQ96C90 147 aa13.72□□□□□ -0.21
CLK4-201ENST00000316308 RIPOR3Q96MK2 946 aa13.72□□□□□ -0.21
CLK4-201ENST00000316308 TBX5Q99593 518 aa13.72□□□□□ -0.21
CLK4-201ENST00000316308 TWSG1Q9GZX9 223 aa13.72□□□□□ -0.21
CLK4-201ENST00000316308 MTHFD2LQ9H903 347 aaPredicted RBP13.72□□□□□ -0.21
CLK4-201ENST00000316308 IL20Q9NYY1 176 aa13.72□□□□□ -0.21
CLK4-201ENST00000316308 MAT2BQ9NZL9 334 aa13.72□□□□□ -0.21
CLK4-201ENST00000316308 C19orf53Q9UNZ5 99 aaPredicted RBP13.72□□□□□ -0.21
CLK4-201ENST00000316308 CFL2Q9Y281 166 aa13.72□□□□□ -0.21
CLK4-201ENST00000316308 SF3B6Q9Y3B4 125 aaKnown RBP13.72□□□□□ -0.21
CLK4-201ENST00000316308 V9GYH0 126 aa13.72□□□□□ -0.21
CLK4-201ENST00000316308 ZNF670-ZNF695F2Z2N8 137 aa13.72□□□□□ -0.21
CLK4-201ENST00000316308 GABRA3P34903 492 aa13.72□□□□□ -0.21
CLK4-201ENST00000316308 ARFIP1P53367 373 aa13.72□□□□□ -0.21
CLK4-201ENST00000316308 RAB15P59190 212 aa13.72□□□□□ -0.21
CLK4-201ENST00000316308 HNRNPA0Q13151 305 aaKnown RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms