RNA–Protein interactions for RNA: ENST00000310301.8

VPS41-202, Transcript of VPS41, HOPS complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS41, Length 5,903 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-202ENST00000310301 RAB19A4D1S5 217 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 PRAF2O60831 178 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 SCGB1D1O95968 90 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 OAS1P00973 400 aaKnown RBP7.74□□□□□ -1.17
VPS41-202ENST00000310301 GP1BBP13224 206 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 HSD17B1P14061 328 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 UGT2B7P16662 529 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 MTNR1AP48039 350 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 NOVA1P51513 510 aaKnown RBP7.74□□□□□ -1.17
VPS41-202ENST00000310301 ACY1Q03154 408 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 HYAL2Q12891 473 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 UNC50Q53HI1 259 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 CES4AQ5XG92 561 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 OR51A7Q8NH64 312 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 HCAR2Q8TDS4 363 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 ZNF416Q9BWM5 594 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 IL21RQ9HBE5 538 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 POPDC3Q9HBV1 291 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 WASH6PQ9NQA3 447 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 OTOL1A6NHN0 477 aaPredicted RBP7.74□□□□□ -1.17
VPS41-202ENST00000310301 GLOD5A6NK44 160 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 C11orf98E9PRG8 122 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 K7EPK0 472 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 SOX1O00570 391 aaPredicted RBP7.74□□□□□ -1.17
VPS41-202ENST00000310301 CLDN7O95471 211 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 RPS17P08708 135 aaKnown RBP7.74□□□□□ -1.17
VPS41-202ENST00000310301 ADRB3P13945 408 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 M6PRP20645 277 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 CTSOP43234 321 aaPredicted RBP7.74□□□□□ -1.17
VPS41-202ENST00000310301 LEPRP48357 1165 aaKnown RBP7.74□□□□□ -1.17
VPS41-202ENST00000310301 KCNC1P48547 511 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 CYCSP99999 105 aaKnown RBP7.74□□□□□ -1.17
VPS41-202ENST00000310301 PTPRCAPQ14761 206 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 SPCS2Q15005 226 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 PEA15Q15121 130 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 SGCBQ16585 318 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 DPY19L2P1Q6NXN4 242 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 KCTD18Q6PI47 426 aaPredicted RBP7.74□□□□□ -1.17
VPS41-202ENST00000310301 AGTRAPQ6RW13 159 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 TMIGD1Q6UXZ0 262 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 FAM71E2Q8N5Q1 922 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 CLDN19Q8N6F1 224 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 SORCS1Q8WY21 1168 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 MR1Q95460 341 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 NT5C3BQ969T7 300 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 ZNF419Q96HQ0 510 aaPredicted RBP7.74□□□□□ -1.17
VPS41-202ENST00000310301 LURAP1Q96LR2 239 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 MROQ9BYG7 248 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 TXNL4BQ9NX01 149 aaKnown RBP7.74□□□□□ -1.17
VPS41-202ENST00000310301 B3GALT1Q9Y5Z6 326 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 TNFSF12-TNFSF13A0A0A6YY99 330 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 SLC22A31A6NKX4 558 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 AQP9O43315 295 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 TNFSF12O43508 249 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 CD1DP15813 335 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 RACK1P63244 317 aaKnown RBP7.74□□□□□ -1.17
VPS41-202ENST00000310301 NFATC2Q13469 925 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 ZFAND4Q86XD8 727 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 CCDC71Q8IV32 467 aaPredicted RBP7.74□□□□□ -1.17
VPS41-202ENST00000310301 SIMC1Q8NDZ2 872 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 MCCC2Q9HCC0 563 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 RXFP3Q9NSD7 469 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 PLAGL1Q9UM63 463 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 TRAV18A0A075B6X5 111 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 NME4O00746 187 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 B4GAT1O43505 415 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 ARHGEF15O94989 841 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 CCNOP22674 350 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 CD27P26842 260 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 PRKAR1BP31321 381 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 ACVRL1P37023 503 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 ETV1P50549 477 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 NR0B1P51843 470 aaKnown RBP7.74□□□□□ -1.17
VPS41-202ENST00000310301 CLRN1P58418 232 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 YPEL5P62699 121 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 ZXDAP98168 799 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 TLE3Q04726 772 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 APOFQ13790 326 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 PTPRRQ15256 657 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 DECR1Q16698 335 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 NKPD1Q17RQ9 610 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 RPL13AP3Q6NVV1 102 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 SSX9Q7RTT3 188 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 LSMEM2Q8N112 164 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 PQLC3Q8N755 202 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 ST7LQ8TDW4 575 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 ISG20Q96AZ6 181 aaKnown RBP7.74□□□□□ -1.17
VPS41-202ENST00000310301 WDR77Q9BQA1 342 aaPredicted RBP7.74□□□□□ -1.17
VPS41-202ENST00000310301 HRH4Q9H3N8 390 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 B3GAT2Q9NPZ5 323 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 OR7A17O14581 309 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 HOXC11O43248 304 aaPredicted RBP7.74□□□□□ -1.17
VPS41-202ENST00000310301 SNNO75324 88 aaPredicted RBP7.74□□□□□ -1.17
VPS41-202ENST00000310301 ITGB7P26010 798 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 SHMT2P34897 504 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 CAPZA1P52907 286 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 SLC29A4Q7RTT9 530 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 UMODL1-AS1Q8N2C9 162 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 PLA2G15Q8NCC3 412 aa7.74□□□□□ -1.17
VPS41-202ENST00000310301 OR5H2Q8NGV7 314 aa7.74□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 240.8 ms