RNA–Protein interactions for RNA: ENST00000308664.10

ATP2A2-201, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2A2, Length 4,453 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A2-201ENST00000308664 TRAM1Q15629 374 aa17.16■□□□□ 0.34
ATP2A2-201ENST00000308664 DHRS4L2Q6PKH6 230 aa17.16■□□□□ 0.34
ATP2A2-201ENST00000308664 LIPIQ6XZB0 460 aa17.16■□□□□ 0.34
ATP2A2-201ENST00000308664 ZNF852Q6ZMS4 543 aa17.16■□□□□ 0.34
ATP2A2-201ENST00000308664 LKAAEAR1Q8TD35 194 aa17.16■□□□□ 0.34
ATP2A2-201ENST00000308664 SLC6A16Q9GZN6 736 aa17.16■□□□□ 0.34
ATP2A2-201ENST00000308664 DDX31Q9H8H2 851 aaKnown RBP17.16■□□□□ 0.34
ATP2A2-201ENST00000308664 GALNT9Q9HCQ5 603 aa17.16■□□□□ 0.34
ATP2A2-201ENST00000308664 KLRF1Q9NZS2 232 aa17.16■□□□□ 0.34
ATP2A2-201ENST00000308664 LIPT1Q9Y234 373 aa17.16■□□□□ 0.34
ATP2A2-201ENST00000308664 A0A1B0GTL3 188 aa17.16■□□□□ 0.34
ATP2A2-201ENST00000308664 A0A1B0GVI7 797 aa17.16■□□□□ 0.34
ATP2A2-201ENST00000308664 MTRF1O75570 445 aaKnown RBP17.16■□□□□ 0.34
ATP2A2-201ENST00000308664 LRIT3Q3SXY7 679 aa17.16■□□□□ 0.34
ATP2A2-201ENST00000308664 FCRLBQ6BAA4 426 aa17.16■□□□□ 0.34
ATP2A2-201ENST00000308664 SLC39A13Q96H72 371 aa17.16■□□□□ 0.34
ATP2A2-201ENST00000308664 NEDD4LQ96PU5 975 aa17.16■□□□□ 0.34
ATP2A2-201ENST00000308664 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.16■□□□□ 0.34
ATP2A2-201ENST00000308664 IKZF5Q9H5V7 419 aa17.16■□□□□ 0.34
ATP2A2-201ENST00000308664 PRDM9Q9NQV7 894 aa17.16■□□□□ 0.34
ATP2A2-201ENST00000308664 FBXO8Q9NRD0 319 aa17.16■□□□□ 0.34
ATP2A2-201ENST00000308664 C2orf74A8MZ97 194 aa17.15■□□□□ 0.34
ATP2A2-201ENST00000308664 PTPN6P29350 595 aa17.15■□□□□ 0.34
ATP2A2-201ENST00000308664 RPS19P39019 145 aaKnown RBP17.15■□□□□ 0.34
ATP2A2-201ENST00000308664 MGAT3Q09327 533 aa17.15■□□□□ 0.34
ATP2A2-201ENST00000308664 TOR1AIP2Q8NFQ8 470 aa17.15■□□□□ 0.34
ATP2A2-201ENST00000308664 OR4K13Q8NH42 304 aa17.15■□□□□ 0.34
ATP2A2-201ENST00000308664 PMM1Q92871 262 aa17.15■□□□□ 0.34
ATP2A2-201ENST00000308664 SRA1Q9HD15 236 aaKnown RBP17.15■□□□□ 0.34
ATP2A2-201ENST00000308664 NCDNQ9UBB6 729 aa17.15■□□□□ 0.34
ATP2A2-201ENST00000308664 CLEC2DQ9UHP7 191 aa17.15■□□□□ 0.34
ATP2A2-201ENST00000308664 EDARQ9UNE0 448 aa17.15■□□□□ 0.34
ATP2A2-201ENST00000308664 COL18A1P39060 1754 aa17.15■□□□□ 0.34
ATP2A2-201ENST00000308664 TRBV4-1A0A0J9YWV2 114 aa17.15■□□□□ 0.34
ATP2A2-201ENST00000308664 ARPC1BO15143 372 aaKnown RBP17.15■□□□□ 0.34
ATP2A2-201ENST00000308664 EMC8O43402 210 aa17.15■□□□□ 0.34
ATP2A2-201ENST00000308664 PVALBP20472 110 aaPredicted RBP17.15■□□□□ 0.34
ATP2A2-201ENST00000308664 HOXD9P28356 352 aaPredicted RBP17.15■□□□□ 0.34
ATP2A2-201ENST00000308664 XKR7Q5GH72 579 aa17.15■□□□□ 0.34
ATP2A2-201ENST00000308664 FAM78AQ5JUQ0 283 aa17.15■□□□□ 0.34
ATP2A2-201ENST00000308664 C1orf189Q5VU69 101 aa17.15■□□□□ 0.34
ATP2A2-201ENST00000308664 TANGO2Q6ICL3 276 aa17.15■□□□□ 0.34
ATP2A2-201ENST00000308664 SLC29A4Q7RTT9 530 aa17.15■□□□□ 0.34
ATP2A2-201ENST00000308664 GPR34Q9UPC5 381 aa17.15■□□□□ 0.34
ATP2A2-201ENST00000308664 ASB1Q9Y576 335 aa17.15■□□□□ 0.34
ATP2A2-201ENST00000308664 SVILO95425 2214 aa17.15■□□□□ 0.34
ATP2A2-201ENST00000308664 LRRTM2O43300 516 aa17.15■□□□□ 0.34
ATP2A2-201ENST00000308664 B3GALT4O96024 378 aa17.15■□□□□ 0.34
ATP2A2-201ENST00000308664 CYB5AP00167 134 aa17.15■□□□□ 0.34
ATP2A2-201ENST00000308664 EPHA2P29317 976 aa17.15■□□□□ 0.34
ATP2A2-201ENST00000308664 ACTC1P68032 377 aa17.15■□□□□ 0.34
ATP2A2-201ENST00000308664 ACTA1P68133 377 aa17.15■□□□□ 0.34
ATP2A2-201ENST00000308664 PODNL1Q6PEZ8 512 aa17.15■□□□□ 0.34
ATP2A2-201ENST00000308664 UNC5DQ6UXZ4 953 aa17.15■□□□□ 0.34
ATP2A2-201ENST00000308664 ASPGQ86U10 573 aa17.15■□□□□ 0.34
ATP2A2-201ENST00000308664 LAMTOR5O43504 91 aa17.15■□□□□ 0.34
ATP2A2-201ENST00000308664 OR2L2Q8NH16 312 aa17.15■□□□□ 0.34
ATP2A2-201ENST00000308664 OR56A3Q8NH54 315 aa17.15■□□□□ 0.34
ATP2A2-201ENST00000308664 PDLIM5Q96HC4 596 aaKnown RBP17.15■□□□□ 0.34
ATP2A2-201ENST00000308664 RETREG1Q9H6L5 497 aa17.15■□□□□ 0.34
ATP2A2-201ENST00000308664 SEC61A2Q9H9S3 476 aa17.15■□□□□ 0.34
ATP2A2-201ENST00000308664 TXNL4BQ9NX01 149 aaKnown RBP17.15■□□□□ 0.34
ATP2A2-201ENST00000308664 SCDO00767 359 aa17.14■□□□□ 0.33
ATP2A2-201ENST00000308664 ARSBP15848 533 aa17.14■□□□□ 0.33
ATP2A2-201ENST00000308664 RAB28P51157 221 aa17.14■□□□□ 0.33
ATP2A2-201ENST00000308664 HHEXQ03014 270 aa17.14■□□□□ 0.33
ATP2A2-201ENST00000308664 CRYZQ08257 329 aaKnown RBP17.14■□□□□ 0.33
ATP2A2-201ENST00000308664 FIGNL1Q6PIW4 674 aa17.14■□□□□ 0.33
ATP2A2-201ENST00000308664 OR52E2Q8NGJ4 325 aa17.14■□□□□ 0.33
ATP2A2-201ENST00000308664 TNFRSF10AO00220 468 aa17.14■□□□□ 0.33
ATP2A2-201ENST00000308664 MAS1P04201 325 aa17.14■□□□□ 0.33
ATP2A2-201ENST00000308664 AOAHP28039 575 aa17.14■□□□□ 0.33
ATP2A2-201ENST00000308664 AHRP35869 848 aa17.14■□□□□ 0.33
ATP2A2-201ENST00000308664 RAB40BQ12829 278 aa17.14■□□□□ 0.33
ATP2A2-201ENST00000308664 POTEKPQ9BYX7 375 aa17.14■□□□□ 0.33
ATP2A2-201ENST00000308664 DPH1Q9BZG8 443 aa17.14■□□□□ 0.33
ATP2A2-201ENST00000308664 MCOLN1Q9GZU1 580 aa17.14■□□□□ 0.33
ATP2A2-201ENST00000308664 SYNPO2LQ9H987 977 aa17.14■□□□□ 0.33
ATP2A2-201ENST00000308664 TCRBV5S2A0A599 114 aa17.14■□□□□ 0.33
ATP2A2-201ENST00000308664 EIF3FO00303 357 aaPredicted RBP17.14■□□□□ 0.33
ATP2A2-201ENST00000308664 TRAPPC6AO75865 159 aa17.14■□□□□ 0.33
ATP2A2-201ENST00000308664 GABRA3P34903 492 aa17.14■□□□□ 0.33
ATP2A2-201ENST00000308664 RRAS2P62070 204 aaPredicted RBP17.14■□□□□ 0.33
ATP2A2-201ENST00000308664 NDUFAF5Q5TEU4 345 aa17.14■□□□□ 0.33
ATP2A2-201ENST00000308664 ATG5Q9H1Y0 275 aa17.14■□□□□ 0.33
ATP2A2-201ENST00000308664 NT5DC2Q9H857 520 aa17.14■□□□□ 0.33
ATP2A2-201ENST00000308664 GDE1Q9NZC3 331 aa17.14■□□□□ 0.33
ATP2A2-201ENST00000308664 PCDHGA6Q9Y5G7 932 aa17.14■□□□□ 0.33
ATP2A2-201ENST00000308664 SCGB1D2O95969 90 aa17.13■□□□□ 0.33
ATP2A2-201ENST00000308664 MT-ND4P03905 459 aa17.13■□□□□ 0.33
ATP2A2-201ENST00000308664 GJA4P35212 333 aa17.13■□□□□ 0.33
ATP2A2-201ENST00000308664 EIF1AXP47813 144 aaKnown RBP17.13■□□□□ 0.33
ATP2A2-201ENST00000308664 TAS2R38P59533 333 aa17.13■□□□□ 0.33
ATP2A2-201ENST00000308664 RAB2AP61019 212 aa17.13■□□□□ 0.33
ATP2A2-201ENST00000308664 RPS25P62851 125 aaKnown RBP17.13■□□□□ 0.33
ATP2A2-201ENST00000308664 TMEM179BQ7Z7N9 219 aa17.13■□□□□ 0.33
ATP2A2-201ENST00000308664 AKIP1Q9NQ31 210 aa17.13■□□□□ 0.33
ATP2A2-201ENST00000308664 MEMO1Q9Y316 297 aa17.13■□□□□ 0.33
ATP2A2-201ENST00000308664 NUBP2Q9Y5Y2 271 aa17.13■□□□□ 0.33
ATP2A2-201ENST00000308664 TEX46H3BTG2 121 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms