RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 ANKRA2Q9H9E1 313 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 DNAJB11Q9UBS4 358 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 NUFIP1Q9UHK0 495 aaKnown RBP10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 A0A1W2PPC4 97 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 A0A1W2PPK0 400 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 FAM171A2A8MVW0 826 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 PSMD7P51665 324 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 PPP2CBP62714 309 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 PPP2CAP67775 309 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 NEDD4LQ96PU5 975 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 BARD1Q99728 777 aaKnown RBP10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 DNTTIP1Q9H147 329 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 ZNF701Q9NV72 531 aaPredicted RBP10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 KDELR2P33947 212 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 CCL7P80098 99 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 GALNT1Q10472 559 aaPredicted RBP10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 TEX26Q8N6G2 289 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 OR2T4Q8NH00 348 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 WDR83Q9BRX9 315 aaKnown RBP10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 SLC6A16Q9GZN6 736 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 KAT8Q9H7Z6 458 aaKnown RBP10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 MEMO1Q9Y316 297 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 PCDHA9Q9Y5H5 950 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 DOCK3Q8IZD9 2030 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 TEX46H3BTG2 121 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 ALOX12BO75342 701 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 PTHP01270 115 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 MMP2P08253 660 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 TYSND1Q2T9J0 566 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 PLET1Q6UQ28 207 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 LANCL3Q6ZV70 420 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 NRMQ8IXM6 262 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 NUDT22Q9BRQ3 303 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 MYNNQ9NPC7 610 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 IGLV3-10A0A075B6K4 115 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 A6NIZ1 184 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 M0R3H8 397 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 E2F3O00716 465 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 AP1G1O43747 822 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 GLB1P16278 677 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 RAP1BP61224 184 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 RAP1AP62834 184 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 HTRA4P83105 476 aaPredicted RBP10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 POU4F2Q12837 409 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 GXYLT1Q4G148 440 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 PYCR3Q53H96 274 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 GLT8D1Q68CQ7 371 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 CWF19L1Q69YN2 538 aaKnown RBP10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 ASB18Q6ZVZ8 466 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 PSD4Q8NDX1 1056 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 SEC14L1Q92503 715 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 HTRA1Q92743 480 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 PINK1Q9BXM7 581 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 DPH1Q9BZG8 443 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 ATG5Q9H1Y0 275 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 TOR3AQ9H497 397 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 FGF22Q9HCT0 170 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 SLC7A8Q9UHI5 535 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 PCDHGA8Q9Y5G5 932 aa10.06□□□□□ -0.8
SYNPO2-201ENST00000307142 BPNT1O95861 308 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 MZT1Q08AG7 82 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 RGNQ15493 299 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 ATAD3CQ5T2N8 411 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 NOSIPQ9Y314 301 aaKnown RBP10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 MTRF1O75570 445 aaKnown RBP10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 SLC22A10Q63ZE4 541 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 KCNE4Q8WWG9 221 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 THRSPQ92748 146 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 ICKQ9UPZ9 632 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 SHANK3Q9BYB0 1731 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 ANKRD30BLA7E2S9 258 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 CLPXO76031 633 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 FOXA1P55317 472 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 ACTC1P68032 377 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 ACTA1P68133 377 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 EIF2B1Q14232 305 aaKnown RBP10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 SEC23BQ15437 767 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 CDHR3Q6ZTQ4 885 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 VRK3Q8IV63 474 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 OR5L1Q8NGL2 311 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 DUSP19Q8WTR2 217 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 TMEM174Q8WUU8 243 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 S100A16Q96FQ6 103 aaKnown RBP10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 RPP25Q9BUL9 199 aaKnown RBP10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 NTMT1Q9BV86 223 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 OR5K3A6NET4 321 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 GABRR3A8MPY1 467 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 BDH1Q02338 343 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 TMEM176BQ3YBM2 270 aaPredicted RBP10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 HENMT1Q5T8I9 393 aaKnown RBP10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 MEDAGQ5VYS4 303 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 MSANTD1Q6ZTZ1 278 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 SNX29P2Q8IUI4 249 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 FKBP10Q96AY3 582 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 HCAR1Q9BXC0 346 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 OR10A5Q9H207 317 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 PRDM9Q9NQV7 894 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 ZNF443Q9Y2A4 671 aaPredicted RBP10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 ZNF451Q9Y4E5 1061 aa10.05□□□□□ -0.8
SYNPO2-201ENST00000307142 SCN1AP35498 2009 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms