RNA–Protein interactions for RNA: ENST00000299847.6

CHRFAM7A-201, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRFAM7A, Length 6,220 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-201ENST00000299847 CDH20Q9HBT6 801 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 IL26Q9NPH9 171 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 CD93Q9NPY3 652 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 MYH6P13533 1939 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 ADH6P28332 368 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 MANEALQ5VSG8 457 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 KIAA0895LQ68EN5 471 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 CNIH2Q6PI25 160 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 RRNAD1Q96FB5 475 aaKnown RBP12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 LRIG1Q96JA1 1093 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 APOOQ9BUR5 198 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 ZCWPW2A0A1B0GU75 182 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 WDPCPO95876 746 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 HNRNPA1P09651 372 aaKnown RBP eCLIP12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 XCR1P46094 333 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 SLC6A11P48066 632 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 PPP5CP53041 499 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 AAK1Q2M2I8 961 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 OR13J1Q8NGT2 312 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 FIBINQ8TAL6 211 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 RLN3Q8WXF3 142 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 MAP3K3Q99759 626 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 LMAN1LQ9HAT1 526 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 PLEKHJ1Q9NW61 149 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 RIMS3Q9UJD0 308 aa12.81□□□□□ -0.36
CHRFAM7A-201ENST00000299847 HSPB6O14558 160 aa12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 PEX14O75381 377 aa12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 ALDOBP05062 364 aa12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 ERP29P30040 261 aaKnown RBP12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 OPRL1P41146 370 aa12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 RPL35P42766 123 aaKnown RBP12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 EEF1A1P68104 462 aaKnown RBP12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 DSC1Q08554 894 aa12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 TMIEQ8NEW7 156 aa12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 IL1F10Q8WWZ1 152 aa12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 THRSPQ92748 146 aa12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 GSTO2Q9H4Y5 243 aa12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 PIP5K1CO60331 668 aa12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 SERPINA5P05154 406 aa12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 MAMDC4Q6UXC1 1216 aa12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 TECPR1Q7Z6L1 1165 aa12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 MS4A4EQ96PG1 132 aa12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 SLC12A9Q9BXP2 914 aa12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 FAM183AA6NL82 134 aa12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 FTCDNL1E5RQL4 147 aa12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 EPHA4P54764 986 aa12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 LCN10Q6JVE6 187 aa12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 ZNF852Q6ZMS4 543 aa12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 OR52E1Q8NGJ3 308 aa12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 CHPT1Q8WUD6 406 aa12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 ZNF681Q96N22 645 aa12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 SLC30A3Q99726 388 aa12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 CRB3Q9BUF7 120 aa12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 ACTR6Q9GZN1 396 aa12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 PTRH2Q9Y3E5 179 aaKnown RBP12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 MON2Q7Z3U7 1717 aa12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 SLC9B1P1A6NJY1 282 aa12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 FUT1P19526 365 aa12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 CAV3P56539 151 aa12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 NFATC3Q12968 1075 aa12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 LCN8Q6JVE9 175 aa12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 CD163Q86VB7 1156 aa12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 RHBDD1Q8TEB9 315 aa12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 OR2B2Q9GZK3 357 aa12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 VRTNQ9H8Y1 702 aa12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 TEX10Q9NXF1 929 aaPredicted RBP12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 ANKRD28O15084 1053 aa12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 GPR37L1O60883 481 aa12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 APLNRP35414 380 aa12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 GPR155Q7Z3F1 870 aa12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 SCD5Q86SK9 330 aa12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 TEPSINQ96N21 525 aa12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 ACAD8Q9UKU7 415 aa12.8□□□□□ -0.36
CHRFAM7A-201ENST00000299847 A0A0G2JMP0 313 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 ACTL6BO94805 426 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 F10P00742 488 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 IFNA1P01562 189 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 MAT1AQ00266 395 aaKnown RBP12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 GK3PQ14409 553 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 SSX2Q16385 188 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 BEX5Q5H9J7 111 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 DCST2Q5T1A1 773 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 UNC5DQ6UXZ4 953 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 B3GNT7Q8NFL0 401 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 OR4M2Q8NGB6 313 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 PFDN5Q99471 154 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 RTP3Q9BQQ7 232 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 DDX31Q9H8H2 851 aaKnown RBP12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 ARGFXA6NJG6 315 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 ACOT7O00154 380 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 TFP02787 698 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 SERPINA2P20848 420 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 GABARAPL2P60520 117 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 ARG2P78540 354 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 CDK5R2Q13319 367 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 IRF4Q15306 451 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 AKR1C8PQ5T2L2 129 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 PNCKQ6P2M8 343 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 BAIAP2L2Q6UXY1 529 aa12.79□□□□□ -0.36
CHRFAM7A-201ENST00000299847 MRPL21Q7Z2W9 205 aaKnown RBP12.79□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms