RNA–Protein interactions for RNA: ENST00000299565.9

CHRNA5-201, Transcript of cholinergic receptor nicotinic alpha 5 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA5, Length 3,623 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA5-201ENST00000299565 STX11O75558 287 aa16.28■□□□□ 0.2
CHRNA5-201ENST00000299565 LALBAP00709 142 aa16.28■□□□□ 0.2
CHRNA5-201ENST00000299565 HMGN1P05114 100 aa16.28■□□□□ 0.2
CHRNA5-201ENST00000299565 SOX2P48431 317 aa16.28■□□□□ 0.2
CHRNA5-201ENST00000299565 ATP12AP54707 1039 aa16.28■□□□□ 0.2
CHRNA5-201ENST00000299565 ABATP80404 500 aa16.28■□□□□ 0.2
CHRNA5-201ENST00000299565 GXYLT1Q4G148 440 aa16.28■□□□□ 0.2
CHRNA5-201ENST00000299565 ANKRD54Q6NXT1 300 aa16.28■□□□□ 0.2
CHRNA5-201ENST00000299565 C11orf88Q6PI97 169 aa16.28■□□□□ 0.2
CHRNA5-201ENST00000299565 FRRS1Q6ZNA5 592 aa16.28■□□□□ 0.2
CHRNA5-201ENST00000299565 OR52E1Q8NGJ3 308 aa16.28■□□□□ 0.2
CHRNA5-201ENST00000299565 OR5H6Q8NGV6 325 aa16.28■□□□□ 0.2
CHRNA5-201ENST00000299565 OR4K13Q8NH42 304 aa16.28■□□□□ 0.2
CHRNA5-201ENST00000299565 OR5K2Q8NHB8 316 aa16.28■□□□□ 0.2
CHRNA5-201ENST00000299565 CNRIP1Q96F85 164 aaPredicted RBP16.28■□□□□ 0.2
CHRNA5-201ENST00000299565 SNX18Q96RF0 628 aa16.28■□□□□ 0.2
CHRNA5-201ENST00000299565 NDC1Q9BTX1 674 aa16.28■□□□□ 0.2
CHRNA5-201ENST00000299565 TRIM36Q9NQ86 728 aa16.28■□□□□ 0.2
CHRNA5-201ENST00000299565 STARD5Q9NSY2 213 aa16.28■□□□□ 0.2
CHRNA5-201ENST00000299565 SPHK1Q9NYA1 384 aa16.28■□□□□ 0.2
CHRNA5-201ENST00000299565 AK6Q9Y3D8 172 aaKnown RBP16.28■□□□□ 0.2
CHRNA5-201ENST00000299565 V9GYH0 126 aa16.28■□□□□ 0.2
CHRNA5-201ENST00000299565 B4GALT2O60909 372 aa16.27■□□□□ 0.2
CHRNA5-201ENST00000299565 KHDRBS3O75525 346 aaKnown RBP16.27■□□□□ 0.2
CHRNA5-201ENST00000299565 PGDP52209 483 aa16.27■□□□□ 0.2
CHRNA5-201ENST00000299565 OR10A3P58181 314 aa16.27■□□□□ 0.2
CHRNA5-201ENST00000299565 CCDC58Q4VC31 144 aa16.27■□□□□ 0.2
CHRNA5-201ENST00000299565 CAMKMTQ7Z624 323 aa16.27■□□□□ 0.2
CHRNA5-201ENST00000299565 SLC6A18Q96N87 628 aa16.27■□□□□ 0.2
CHRNA5-201ENST00000299565 DPCDQ9BVM2 203 aaPredicted RBP16.27■□□□□ 0.2
CHRNA5-201ENST00000299565 ZBP1Q9H171 429 aa16.27■□□□□ 0.2
CHRNA5-201ENST00000299565 A4GALTQ9NPC4 353 aa16.27■□□□□ 0.2
CHRNA5-201ENST00000299565 NLRC5Q86WI3 1866 aa16.27■□□□□ 0.2
CHRNA5-201ENST00000299565 BCL6P41182 706 aa16.27■□□□□ 0.2
CHRNA5-201ENST00000299565 COMTD1Q86VU5 262 aa16.27■□□□□ 0.2
CHRNA5-201ENST00000299565 OR13C5Q8NGS8 318 aa16.27■□□□□ 0.2
CHRNA5-201ENST00000299565 OTUB2Q96DC9 234 aa16.27■□□□□ 0.2
CHRNA5-201ENST00000299565 MIXL1Q9H2W2 232 aa16.27■□□□□ 0.2
CHRNA5-201ENST00000299565 HINT3Q9NQE9 182 aaKnown RBP16.27■□□□□ 0.2
CHRNA5-201ENST00000299565 GNG8Q9UK08 70 aa16.27■□□□□ 0.2
CHRNA5-201ENST00000299565 IFNA16P05015 189 aa16.27■□□□□ 0.19
CHRNA5-201ENST00000299565 ITGB7P26010 798 aa16.27■□□□□ 0.19
CHRNA5-201ENST00000299565 HMGA2P52926 109 aa16.27■□□□□ 0.19
CHRNA5-201ENST00000299565 RPA4Q13156 261 aa16.27■□□□□ 0.19
CHRNA5-201ENST00000299565 EXOSC7Q15024 291 aaKnown RBP16.27■□□□□ 0.19
CHRNA5-201ENST00000299565 FAM111BQ6SJ93 734 aa16.27■□□□□ 0.19
CHRNA5-201ENST00000299565 ZNF793Q6ZN11 406 aa16.27■□□□□ 0.19
CHRNA5-201ENST00000299565 PIAS4Q8N2W9 510 aaPredicted RBP16.27■□□□□ 0.19
CHRNA5-201ENST00000299565 SRFBP1Q8NEF9 429 aaKnown RBP16.27■□□□□ 0.19
CHRNA5-201ENST00000299565 OR8D4Q8NGM9 314 aa16.27■□□□□ 0.19
CHRNA5-201ENST00000299565 GOT1L1Q8NHS2 421 aaPredicted RBP16.27■□□□□ 0.19
CHRNA5-201ENST00000299565 TSACCQ96A04 125 aaPredicted RBP16.27■□□□□ 0.19
CHRNA5-201ENST00000299565 MRGPRX3Q96LB0 322 aa16.27■□□□□ 0.19
CHRNA5-201ENST00000299565 OR52D1Q9H346 318 aa16.27■□□□□ 0.19
CHRNA5-201ENST00000299565 TMEM27Q9HBJ8 222 aa16.27■□□□□ 0.19
CHRNA5-201ENST00000299565 NANSQ9NR45 359 aa16.27■□□□□ 0.19
CHRNA5-201ENST00000299565 SLC27A6Q9Y2P4 619 aa16.27■□□□□ 0.19
CHRNA5-201ENST00000299565 RTTNQ86VV8 2226 aa16.27■□□□□ 0.19
CHRNA5-201ENST00000299565 A0A1W2PQU0 124 aa16.26■□□□□ 0.19
CHRNA5-201ENST00000299565 NUDT14O95848 222 aa16.26■□□□□ 0.19
CHRNA5-201ENST00000299565 RLN1P04808 185 aa16.26■□□□□ 0.19
CHRNA5-201ENST00000299565 PVRP15151 417 aa16.26■□□□□ 0.19
CHRNA5-201ENST00000299565 ERP29P30040 261 aaKnown RBP16.26■□□□□ 0.19
CHRNA5-201ENST00000299565 PDE7AQ13946 482 aa16.26■□□□□ 0.19
CHRNA5-201ENST00000299565 OAFQ86UD1 273 aa16.26■□□□□ 0.19
CHRNA5-201ENST00000299565 SIMC1Q8NDZ2 872 aa16.26■□□□□ 0.19
CHRNA5-201ENST00000299565 AKAP1Q92667 903 aaKnown RBP eCLIP16.26■□□□□ 0.19
CHRNA5-201ENST00000299565 THAP7Q9BT49 309 aaPredicted RBP16.26■□□□□ 0.19
CHRNA5-201ENST00000299565 OR52A5Q9H2C5 316 aa16.26■□□□□ 0.19
CHRNA5-201ENST00000299565 BRWD1Q9NSI6 2320 aa16.26■□□□□ 0.19
CHRNA5-201ENST00000299565 IKZF2Q9UKS7 526 aa16.26■□□□□ 0.19
CHRNA5-201ENST00000299565 MGAT4AQ9UM21 535 aa16.26■□□□□ 0.19
CHRNA5-201ENST00000299565 A0A1W2PRQ8 180 aa16.26■□□□□ 0.19
CHRNA5-201ENST00000299565 ACADLP28330 430 aa16.26■□□□□ 0.19
CHRNA5-201ENST00000299565 GABRA3P34903 492 aa16.26■□□□□ 0.19
CHRNA5-201ENST00000299565 PSMB10P40306 273 aa16.26■□□□□ 0.19
CHRNA5-201ENST00000299565 BLVRAP53004 296 aa16.26■□□□□ 0.19
CHRNA5-201ENST00000299565 PDGFRLQ15198 375 aa16.26■□□□□ 0.19
CHRNA5-201ENST00000299565 FAM26EQ8N5C1 309 aa16.26■□□□□ 0.19
CHRNA5-201ENST00000299565 MRPL43Q8N983 215 aaKnown RBP16.26■□□□□ 0.19
CHRNA5-201ENST00000299565 DCLRE1CQ96SD1 692 aaKnown RBP16.26■□□□□ 0.19
CHRNA5-201ENST00000299565 CACNG6Q9BXT2 260 aa16.26■□□□□ 0.19
CHRNA5-201ENST00000299565 PPIEQ9UNP9 301 aaKnown RBP16.26■□□□□ 0.19
CHRNA5-201ENST00000299565 LRIT2A6NDA9 550 aa16.26■□□□□ 0.19
CHRNA5-201ENST00000299565 ZNF888P0CJ79 500 aaPredicted RBP16.26■□□□□ 0.19
CHRNA5-201ENST00000299565 CLUP10909 449 aa16.26■□□□□ 0.19
CHRNA5-201ENST00000299565 ARSBP15848 533 aa16.26■□□□□ 0.19
CHRNA5-201ENST00000299565 TYRP1P17643 537 aa16.26■□□□□ 0.19
CHRNA5-201ENST00000299565 ELK1P19419 428 aa16.26■□□□□ 0.19
CHRNA5-201ENST00000299565 GIFP27352 417 aa16.26■□□□□ 0.19
CHRNA5-201ENST00000299565 FAPQ12884 760 aa16.26■□□□□ 0.19
CHRNA5-201ENST00000299565 LYPD8Q6UX82 237 aa16.26■□□□□ 0.19
CHRNA5-201ENST00000299565 FBXL6Q8N531 539 aa16.26■□□□□ 0.19
CHRNA5-201ENST00000299565 OR13C2Q8NGS9 318 aa16.26■□□□□ 0.19
CHRNA5-201ENST00000299565 TRMT10AQ8TBZ6 339 aaKnown RBP16.26■□□□□ 0.19
CHRNA5-201ENST00000299565 WFIKKN2Q8TEU8 576 aa16.26■□□□□ 0.19
CHRNA5-201ENST00000299565 GCDHQ92947 438 aaPredicted RBP16.26■□□□□ 0.19
CHRNA5-201ENST00000299565 RERGQ96A58 199 aaPredicted RBP16.26■□□□□ 0.19
CHRNA5-201ENST00000299565 ZNF559Q9BR84 538 aa16.26■□□□□ 0.19
CHRNA5-201ENST00000299565 TMEM106CQ9BVX2 250 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms