RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 ABCD3P28288 659 aa22.7■■□□□ 1.22
GTF2A1-201ENST00000298173 LCN1P31025 176 aa22.7■■□□□ 1.22
GTF2A1-201ENST00000298173 OTX2P32243 289 aa22.7■■□□□ 1.22
GTF2A1-201ENST00000298173 PSMD4P55036 377 aaKnown RBP22.7■■□□□ 1.22
GTF2A1-201ENST00000298173 LRRC36Q1X8D7 754 aa22.7■■□□□ 1.22
GTF2A1-201ENST00000298173 RNF220Q5VTB9 566 aa22.7■■□□□ 1.22
GTF2A1-201ENST00000298173 TCTN3Q6NUS6 607 aa22.7■■□□□ 1.22
GTF2A1-201ENST00000298173 RBM45Q8IUH3 476 aaKnown RBP22.7■■□□□ 1.22
GTF2A1-201ENST00000298173 SLC34A3Q8N130 599 aa22.7■■□□□ 1.22
GTF2A1-201ENST00000298173 ZNF347Q96SE7 839 aa22.7■■□□□ 1.22
GTF2A1-201ENST00000298173 RLIMQ9NVW2 624 aa22.7■■□□□ 1.22
GTF2A1-201ENST00000298173 NSG1A0A0A6YYJ2 146 aa22.69■■□□□ 1.22
GTF2A1-201ENST00000298173 DCTP40126 519 aa22.69■■□□□ 1.22
GTF2A1-201ENST00000298173 IL10RAQ13651 578 aa22.69■■□□□ 1.22
GTF2A1-201ENST00000298173 LIN52Q52LA3 116 aa22.69■■□□□ 1.22
GTF2A1-201ENST00000298173 ADAMTS17Q8TE56 1095 aa22.69■■□□□ 1.22
GTF2A1-201ENST00000298173 OIT3Q8WWZ8 545 aa22.69■■□□□ 1.22
GTF2A1-201ENST00000298173 HOXD1Q9GZZ0 328 aa22.69■■□□□ 1.22
GTF2A1-201ENST00000298173 IL17BQ9UHF5 180 aa22.69■■□□□ 1.22
GTF2A1-201ENST00000298173 SLC9A8Q9Y2E8 581 aa22.69■■□□□ 1.22
GTF2A1-201ENST00000298173 CDHR4A6H8M9 788 aa22.68■■□□□ 1.22
GTF2A1-201ENST00000298173 ZNF354AO60765 605 aaPredicted RBP22.68■■□□□ 1.22
GTF2A1-201ENST00000298173 NADKO95544 446 aaPredicted RBP22.68■■□□□ 1.22
GTF2A1-201ENST00000298173 RHCEP18577 417 aa22.68■■□□□ 1.22
GTF2A1-201ENST00000298173 PNLIPRP2P54317 469 aa22.68■■□□□ 1.22
GTF2A1-201ENST00000298173 PLAURQ03405 335 aa22.68■■□□□ 1.22
GTF2A1-201ENST00000298173 PDZK1Q5T2W1 519 aa22.68■■□□□ 1.22
GTF2A1-201ENST00000298173 C16orf47Q6ZP98 133 aaPredicted RBP22.68■■□□□ 1.22
GTF2A1-201ENST00000298173 EPHX4Q8IUS5 362 aa22.68■■□□□ 1.22
GTF2A1-201ENST00000298173 PRR22Q8IZ63 422 aa22.68■■□□□ 1.22
GTF2A1-201ENST00000298173 IL22RA1Q8N6P7 574 aa22.68■■□□□ 1.22
GTF2A1-201ENST00000298173 ICA1LQ8NDH6 482 aa22.68■■□□□ 1.22
GTF2A1-201ENST00000298173 OR6T1Q8NGN1 323 aa22.68■■□□□ 1.22
GTF2A1-201ENST00000298173 KLHL4Q9C0H6 718 aa22.68■■□□□ 1.22
GTF2A1-201ENST00000298173 CACYBPQ9HB71 228 aaKnown RBP22.68■■□□□ 1.22
GTF2A1-201ENST00000298173 VNN3Q9NY84 501 aa22.68■■□□□ 1.22
GTF2A1-201ENST00000298173 MYOTQ9UBF9 498 aa22.68■■□□□ 1.22
GTF2A1-201ENST00000298173 MRPS18BQ9Y676 258 aaKnown RBP22.68■■□□□ 1.22
GTF2A1-201ENST00000298173 M0R3H8 397 aa22.68■■□□□ 1.22
GTF2A1-201ENST00000298173 DNAJB5O75953 348 aa22.68■■□□□ 1.22
GTF2A1-201ENST00000298173 ZNF26P17031 533 aaPredicted RBP22.68■■□□□ 1.22
GTF2A1-201ENST00000298173 NPTX1Q15818 432 aa22.68■■□□□ 1.22
GTF2A1-201ENST00000298173 KLHL26Q53HC5 615 aa22.68■■□□□ 1.22
GTF2A1-201ENST00000298173 ZNF605Q86T29 641 aa22.68■■□□□ 1.22
GTF2A1-201ENST00000298173 EME1Q96AY2 570 aa22.68■■□□□ 1.22
GTF2A1-201ENST00000298173 OMA1Q96E52 524 aa22.68■■□□□ 1.22
GTF2A1-201ENST00000298173 VPS50Q96JG6 964 aa22.68■■□□□ 1.22
GTF2A1-201ENST00000298173 ADOQ96SZ5 270 aa22.68■■□□□ 1.22
GTF2A1-201ENST00000298173 CIB1Q99828 191 aa22.68■■□□□ 1.22
GTF2A1-201ENST00000298173 DEFB126Q9BYW3 111 aa22.68■■□□□ 1.22
GTF2A1-201ENST00000298173 ZNF160Q9HCG1 818 aa22.68■■□□□ 1.22
GTF2A1-201ENST00000298173 UBQLN4Q9NRR5 601 aa22.68■■□□□ 1.22
GTF2A1-201ENST00000298173 ACAD8Q9UKU7 415 aa22.68■■□□□ 1.22
GTF2A1-201ENST00000298173 OAZ3Q9UMX2 235 aa22.68■■□□□ 1.22
GTF2A1-201ENST00000298173 NPFFR2Q9Y5X5 522 aa22.68■■□□□ 1.22
GTF2A1-201ENST00000298173 EXPH5Q8NEV8 1989 aa22.67■■□□□ 1.22
GTF2A1-201ENST00000298173 J3KTA2 159 aa22.67■■□□□ 1.22
GTF2A1-201ENST00000298173 GNGT2O14610 69 aa22.67■■□□□ 1.22
GTF2A1-201ENST00000298173 FFAR1O14842 300 aa22.67■■□□□ 1.22
GTF2A1-201ENST00000298173 TPST2O60704 377 aa22.67■■□□□ 1.22
GTF2A1-201ENST00000298173 REM1O75628 298 aa22.67■■□□□ 1.22
GTF2A1-201ENST00000298173 HPP00738 406 aa22.67■■□□□ 1.22
GTF2A1-201ENST00000298173 CELA2AP08217 269 aa22.67■■□□□ 1.22
GTF2A1-201ENST00000298173 YAP1P46937 504 aaKnown RBP22.67■■□□□ 1.22
GTF2A1-201ENST00000298173 IST1P53990 364 aa22.67■■□□□ 1.22
GTF2A1-201ENST00000298173 PLCXD2Q0VAA5 305 aa22.67■■□□□ 1.22
GTF2A1-201ENST00000298173 FGFBP1Q14512 234 aa22.67■■□□□ 1.22
GTF2A1-201ENST00000298173 TGIF1Q15583 401 aa22.67■■□□□ 1.22
GTF2A1-201ENST00000298173 EIPR1Q53HC9 387 aa22.67■■□□□ 1.22
GTF2A1-201ENST00000298173 MRPL2Q5T653 305 aaKnown RBP22.67■■□□□ 1.22
GTF2A1-201ENST00000298173 TMEM179BQ7Z7N9 219 aa22.67■■□□□ 1.22
GTF2A1-201ENST00000298173 VANGL1Q8TAA9 524 aaPredicted RBP22.67■■□□□ 1.22
GTF2A1-201ENST00000298173 THAP3Q8WTV1 239 aaPredicted RBP22.67■■□□□ 1.22
GTF2A1-201ENST00000298173 PHF10Q8WUB8 498 aaKnown RBP22.67■■□□□ 1.22
GTF2A1-201ENST00000298173 SLC29A1Q99808 456 aa22.67■■□□□ 1.22
GTF2A1-201ENST00000298173 COQ10BQ9H8M1 238 aa22.67■■□□□ 1.22
GTF2A1-201ENST00000298173 P4HTMQ9NXG6 502 aa22.67■■□□□ 1.22
GTF2A1-201ENST00000298173 KLHL28Q9NXS3 571 aa22.67■■□□□ 1.22
GTF2A1-201ENST00000298173 FLRT3Q9NZU0 649 aa22.67■■□□□ 1.22
GTF2A1-201ENST00000298173 PRDM4Q9UKN5 801 aa22.67■■□□□ 1.22
GTF2A1-201ENST00000298173 CNOT11Q9UKZ1 510 aaKnown RBP22.67■■□□□ 1.22
GTF2A1-201ENST00000298173 SAC3D1A6NKF1 404 aa22.66■■□□□ 1.22
GTF2A1-201ENST00000298173 LIPCP11150 499 aa22.66■■□□□ 1.22
GTF2A1-201ENST00000298173 ICAM2P13598 275 aa22.66■■□□□ 1.22
GTF2A1-201ENST00000298173 TBXA2RP21731 343 aa22.66■■□□□ 1.22
GTF2A1-201ENST00000298173 NRG3P56975 720 aa22.66■■□□□ 1.22
GTF2A1-201ENST00000298173 GRAMD2AQ8IUY3 354 aa22.66■■□□□ 1.22
GTF2A1-201ENST00000298173 PIP5K1AQ99755 562 aa22.66■■□□□ 1.22
GTF2A1-201ENST00000298173 ST6GALNAC1Q9NSC7 600 aaPredicted RBP22.66■■□□□ 1.22
GTF2A1-201ENST00000298173 OR6C70A6NIJ9 312 aa22.65■■□□□ 1.22
GTF2A1-201ENST00000298173 WWP2O00308 870 aa22.65■■□□□ 1.22
GTF2A1-201ENST00000298173 ABCB7O75027 752 aa22.65■■□□□ 1.22
GTF2A1-201ENST00000298173 BCAS1O75363 584 aaPredicted RBP22.65■■□□□ 1.22
GTF2A1-201ENST00000298173 UTS2O95399 124 aa22.65■■□□□ 1.22
GTF2A1-201ENST00000298173 CYP4B1P13584 511 aa22.65■■□□□ 1.22
GTF2A1-201ENST00000298173 NAGAP17050 411 aa22.65■■□□□ 1.22
GTF2A1-201ENST00000298173 ADH7P40394 386 aa22.65■■□□□ 1.22
GTF2A1-201ENST00000298173 HMGA2P52926 109 aa22.65■■□□□ 1.22
GTF2A1-201ENST00000298173 ZSWIM7Q19AV6 140 aa22.65■■□□□ 1.22
GTF2A1-201ENST00000298173 GRAMD1BQ3KR37 738 aa22.65■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms