RNA–Protein interactions for RNA: ENST00000296794.10

ARHGEF28-201, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

TSL 5 BASIC

Gene ARHGEF28, Length 5,246 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-201ENST00000296794 KLHL9Q9P2J3 617 aa15.14■□□□□ 0.01
ARHGEF28-201ENST00000296794 CDC40O60508 579 aaKnown RBP eCLIP15.14■□□□□ 0.014e-6■■□□□ 12.3
ARHGEF28-201ENST00000296794 APOC3P02656 99 aa15.14■□□□□ 0.01
ARHGEF28-201ENST00000296794 UGT2B10P36537 528 aa15.14■□□□□ 0.01
ARHGEF28-201ENST00000296794 RIPPLY1Q0D2K3 151 aa15.14■□□□□ 0.01
ARHGEF28-201ENST00000296794 SF3A2Q15428 464 aaKnown RBP15.14■□□□□ 0.01
ARHGEF28-201ENST00000296794 DNAJC22Q8N4W6 341 aa15.14■□□□□ 0.01
ARHGEF28-201ENST00000296794 NAXEQ8NCW5 288 aa15.14■□□□□ 0.01
ARHGEF28-201ENST00000296794 OR9A2Q8NGT5 310 aa15.14■□□□□ 0.01
ARHGEF28-201ENST00000296794 LKAAEAR1Q8TD35 194 aa15.14■□□□□ 0.01
ARHGEF28-201ENST00000296794 PRRC1Q96M27 445 aa15.14■□□□□ 0.01
ARHGEF28-201ENST00000296794 SAP130Q9H0E3 1048 aa15.14■□□□□ 0.01
ARHGEF28-201ENST00000296794 TRPM3Q9HCF6 1732 aaPredicted RBP15.13■□□□□ 0.01
ARHGEF28-201ENST00000296794 HYKKA2RU49 373 aa15.13■□□□□ 0.01
ARHGEF28-201ENST00000296794 CASC3O15234 703 aaKnown RBP15.13■□□□□ 0.01
ARHGEF28-201ENST00000296794 SHC2P98077 582 aa15.13■□□□□ 0.01
ARHGEF28-201ENST00000296794 OCLNQ16625 522 aa15.13■□□□□ 0.01
ARHGEF28-201ENST00000296794 GALNT6Q8NCL4 622 aa15.13■□□□□ 0.01
ARHGEF28-201ENST00000296794 OR5W2Q8NH69 310 aa15.13■□□□□ 0.01
ARHGEF28-201ENST00000296794 SLC22A8Q8TCC7 542 aa15.13■□□□□ 0.01
ARHGEF28-201ENST00000296794 ZNF480Q8WV37 535 aa15.13■□□□□ 0.01
ARHGEF28-201ENST00000296794 SGCDQ92629 289 aa15.13■□□□□ 0.01
ARHGEF28-201ENST00000296794 HMX3A6NHT5 357 aa15.13■□□□□ 0.01
ARHGEF28-201ENST00000296794 H2BFMP0C1H6 154 aa15.13■□□□□ 0.01
ARHGEF28-201ENST00000296794 AIMP2Q13155 320 aaKnown RBP15.13■□□□□ 0.01
ARHGEF28-201ENST00000296794 GRIN2CQ14957 1233 aa15.13■□□□□ 0.01
ARHGEF28-201ENST00000296794 KCNJ8Q15842 424 aa15.13■□□□□ 0.01
ARHGEF28-201ENST00000296794 MS4A4EQ96PG1 132 aa15.13■□□□□ 0.01
ARHGEF28-201ENST00000296794 AIFM2Q9BRQ8 373 aa15.13■□□□□ 0.01
ARHGEF28-201ENST00000296794 ZNF304Q9HCX3 659 aa15.13■□□□□ 0.01
ARHGEF28-201ENST00000296794 A0A1W2PPL8 197 aa15.13■□□□□ 0.01
ARHGEF28-201ENST00000296794 ADAM12O43184 909 aa15.13■□□□□ 0.01
ARHGEF28-201ENST00000296794 MRPS21P82921 87 aaKnown RBP15.13■□□□□ 0.01
ARHGEF28-201ENST00000296794 PLP2Q04941 152 aa15.13■□□□□ 0.01
ARHGEF28-201ENST00000296794 BEST3Q8N1M1 668 aa15.13■□□□□ 0.01
ARHGEF28-201ENST00000296794 TEX37Q96LM6 180 aa15.13■□□□□ 0.01
ARHGEF28-201ENST00000296794 GPR78Q96P69 363 aa15.13■□□□□ 0.01
ARHGEF28-201ENST00000296794 TUBB1Q9H4B7 451 aa15.13■□□□□ 0.01
ARHGEF28-201ENST00000296794 HIDE1A8MVS5 230 aa15.13■□□□□ 0.01
ARHGEF28-201ENST00000296794 HHLA1C9JL84 531 aa15.13■□□□□ 0.01
ARHGEF28-201ENST00000296794 SCO2O43819 266 aa15.13■□□□□ 0.01
ARHGEF28-201ENST00000296794 ARNTP27540 789 aa15.13■□□□□ 0.01
ARHGEF28-201ENST00000296794 CDNFQ49AH0 187 aa15.13■□□□□ 0.01
ARHGEF28-201ENST00000296794 LEG1Q6P5S2 330 aa15.13■□□□□ 0.01
ARHGEF28-201ENST00000296794 PODNL1Q6PEZ8 512 aa15.13■□□□□ 0.01
ARHGEF28-201ENST00000296794 SYT4Q9H2B2 425 aa15.13■□□□□ 0.01
ARHGEF28-201ENST00000296794 HCSTQ9UBK5 93 aa15.13■□□□□ 0.01
ARHGEF28-201ENST00000296794 OR7A10O76100 309 aa15.12■□□□□ 0.01
ARHGEF28-201ENST00000296794 PVALBP20472 110 aaPredicted RBP15.12■□□□□ 0.01
ARHGEF28-201ENST00000296794 PTGER1P34995 402 aa15.12■□□□□ 0.01
ARHGEF28-201ENST00000296794 ZNF91Q05481 1191 aa15.12■□□□□ 0.01
ARHGEF28-201ENST00000296794 NSDHLQ15738 373 aa15.12■□□□□ 0.01
ARHGEF28-201ENST00000296794 LEXMQ3ZCV2 418 aa15.12■□□□□ 0.01
ARHGEF28-201ENST00000296794 SPIN3Q5JUX0 258 aa15.12■□□□□ 0.01
ARHGEF28-201ENST00000296794 FAM26DQ5JW98 314 aa15.12■□□□□ 0.01
ARHGEF28-201ENST00000296794 PTCRAQ6ISU1 281 aaPredicted RBP15.12■□□□□ 0.01
ARHGEF28-201ENST00000296794 LRFN4Q6PJG9 635 aa15.12■□□□□ 0.01
ARHGEF28-201ENST00000296794 Q6ZNX1 250 aa15.12■□□□□ 0.01
ARHGEF28-201ENST00000296794 KIF18BQ86Y91 864 aa15.12■□□□□ 0.01
ARHGEF28-201ENST00000296794 ASB12Q8WXK4 309 aa15.12■□□□□ 0.01
ARHGEF28-201ENST00000296794 RABL2AQ9UBK7 228 aaPredicted RBP15.12■□□□□ 0.01
ARHGEF28-201ENST00000296794 RABL2BQ9UNT1 228 aa15.12■□□□□ 0.01
ARHGEF28-201ENST00000296794 CACNG2Q9Y698 323 aa15.12■□□□□ 0.01
ARHGEF28-201ENST00000296794 SEC14L2O76054 403 aa15.12■□□□□ 0.01
ARHGEF28-201ENST00000296794 RBMXP38159 391 aaKnown RBP15.12■□□□□ 0.01
ARHGEF28-201ENST00000296794 TP53I3Q53FA7 332 aa15.12■□□□□ 0.01
ARHGEF28-201ENST00000296794 DUS1LQ6P1R4 473 aaKnown RBP15.12■□□□□ 0.01
ARHGEF28-201ENST00000296794 PDZD3Q86UT5 571 aa15.12■□□□□ 0.01
ARHGEF28-201ENST00000296794 PPP4R1LQ9P1A2 415 aa15.12■□□□□ 0.01
ARHGEF28-201ENST00000296794 HPGDSO60760 199 aa15.12■□□□□ 0.01
ARHGEF28-201ENST00000296794 CYP17A1P05093 508 aa15.12■□□□□ 0.01
ARHGEF28-201ENST00000296794 CLUP10909 449 aa15.12■□□□□ 0.01
ARHGEF28-201ENST00000296794 CHMP24386 653 aa15.12■□□□□ 0.01
ARHGEF28-201ENST00000296794 CSNK1DP48730 415 aa15.12■□□□□ 0.01
ARHGEF28-201ENST00000296794 MLLT11Q13015 90 aaPredicted RBP15.12■□□□□ 0.01
ARHGEF28-201ENST00000296794 COL28A1Q2UY09 1125 aa15.12■□□□□ 0.01
ARHGEF28-201ENST00000296794 C1orf189Q5VU69 101 aa15.12■□□□□ 0.01
ARHGEF28-201ENST00000296794 TMEM207Q6UWW9 146 aa15.12■□□□□ 0.01
ARHGEF28-201ENST00000296794 DPPA4Q7L190 304 aa15.12■□□□□ 0.01
ARHGEF28-201ENST00000296794 COMMD7Q86VX2 200 aa15.12■□□□□ 0.01
ARHGEF28-201ENST00000296794 C7orf34Q96L11 122 aa15.12■□□□□ 0.01
ARHGEF28-201ENST00000296794 GJA4P35212 333 aa15.12■□□□□ 0.01
ARHGEF28-201ENST00000296794 HOXC5Q00444 222 aa15.12■□□□□ 0.01
ARHGEF28-201ENST00000296794 GGTA1PQ4G0N0 100 aa15.12■□□□□ 0.01
ARHGEF28-201ENST00000296794 SBSNQ6UWP8 590 aa15.12■□□□□ 0.01
ARHGEF28-201ENST00000296794 ZMYND19Q96E35 227 aaPredicted RBP15.12■□□□□ 0.01
ARHGEF28-201ENST00000296794 ZFYVE21Q9BQ24 234 aa15.12■□□□□ 0.01
ARHGEF28-201ENST00000296794 MAST2Q6P0Q8 1798 aa15.12■□□□□ 0.01
ARHGEF28-201ENST00000296794 ERVFC1P60507 584 aa15.11■□□□□ 0.01
ARHGEF28-201ENST00000296794 TAP2Q03519 686 aa15.11■□□□□ 0.01
ARHGEF28-201ENST00000296794 FOXB2Q5VYV0 432 aa15.11■□□□□ 0.01
ARHGEF28-201ENST00000296794 GPAT4Q86UL3 456 aa15.11■□□□□ 0.01
ARHGEF28-201ENST00000296794 ZNF283Q8N7M2 679 aa15.11■□□□□ 0.01
ARHGEF28-201ENST00000296794 TSNAXQ99598 290 aaKnown RBP15.11■□□□□ 0.01
ARHGEF28-201ENST00000296794 THAP7Q9BT49 309 aaPredicted RBP15.11■□□□□ 0.01
ARHGEF28-201ENST00000296794 DDX31Q9H8H2 851 aaKnown RBP15.11■□□□□ 0.01
ARHGEF28-201ENST00000296794 DNMT3BQ9UBC3 853 aaKnown RBP15.11■□□□□ 0.01
ARHGEF28-201ENST00000296794 PIGAP37287 484 aa15.11■□□□□ 0.01
ARHGEF28-201ENST00000296794 CTBP2P56545 445 aa15.11■□□□□ 0.01
ARHGEF28-201ENST00000296794 C6orf132Q5T0Z8 1188 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms