RNA–Protein interactions for RNA: ENST00000287008.7

PCDH1-201, Transcript of protocadherin 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene PCDH1, Length 4,793 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-201ENST00000287008 DAP3P51398 398 aaKnown RBP17.44■□□□□ 0.38
PCDH1-201ENST00000287008 IST1P53990 364 aa17.44■□□□□ 0.38
PCDH1-201ENST00000287008 SPERTQ8NA61 448 aa17.44■□□□□ 0.38
PCDH1-201ENST00000287008 WFDC5Q8TCV5 224 aa17.44■□□□□ 0.38
PCDH1-201ENST00000287008 SPTSSAQ969W0 71 aa17.44■□□□□ 0.38
PCDH1-201ENST00000287008 EPHX3Q9H6B9 360 aa17.44■□□□□ 0.38
PCDH1-201ENST00000287008 C13orf42A0A1B0GVH6 325 aa17.44■□□□□ 0.38
PCDH1-201ENST00000287008 HTR3AP46098 478 aa17.44■□□□□ 0.38
PCDH1-201ENST00000287008 RAB15P59190 212 aa17.44■□□□□ 0.38
PCDH1-201ENST00000287008 DCDP81605 110 aaKnown RBP17.44■□□□□ 0.38
PCDH1-201ENST00000287008 PTPRRQ15256 657 aa17.44■□□□□ 0.38
PCDH1-201ENST00000287008 NMNAT1Q9HAN9 279 aaPredicted RBP17.44■□□□□ 0.38
PCDH1-201ENST00000287008 CNIH4Q9P003 139 aa17.44■□□□□ 0.38
PCDH1-201ENST00000287008 MYH15Q9Y2K3 1946 aa17.44■□□□□ 0.38
PCDH1-201ENST00000287008 S100A10P60903 97 aa17.43■□□□□ 0.38
PCDH1-201ENST00000287008 SERPINA11Q86U17 422 aa17.43■□□□□ 0.38
PCDH1-201ENST00000287008 OR13C3Q8NGS6 347 aa17.43■□□□□ 0.38
PCDH1-201ENST00000287008 SFXN5Q8TD22 340 aa17.43■□□□□ 0.38
PCDH1-201ENST00000287008 BTBD2Q9BX70 525 aa17.43■□□□□ 0.38
PCDH1-201ENST00000287008 GPR52Q9Y2T5 361 aa17.43■□□□□ 0.38
PCDH1-201ENST00000287008 GLI3P10071 1580 aa17.43■□□□□ 0.38
PCDH1-201ENST00000287008 GKN3PP0CG01 181 aa17.43■□□□□ 0.38
PCDH1-201ENST00000287008 EEF1A1P68104 462 aaKnown RBP17.43■□□□□ 0.38
PCDH1-201ENST00000287008 GPR18Q14330 331 aa17.43■□□□□ 0.38
PCDH1-201ENST00000287008 METTL4Q8N3J2 472 aa17.43■□□□□ 0.38
PCDH1-201ENST00000287008 LMNTD1Q8N9Z9 388 aa17.43■□□□□ 0.38
PCDH1-201ENST00000287008 MINDY2Q8NBR6 621 aa17.43■□□□□ 0.38
PCDH1-201ENST00000287008 DMRTB1Q96MA1 342 aa17.43■□□□□ 0.38
PCDH1-201ENST00000287008 MMP27Q9H306 513 aa17.43■□□□□ 0.38
PCDH1-201ENST00000287008 ASCC3Q8N3C0 2202 aaKnown RBP17.43■□□□□ 0.38
PCDH1-201ENST00000287008 CDC14CA4D256 554 aa17.43■□□□□ 0.38
PCDH1-201ENST00000287008 SH3D21A4FU49 640 aa17.43■□□□□ 0.38
PCDH1-201ENST00000287008 TNFRSF10CO14798 259 aa17.43■□□□□ 0.38
PCDH1-201ENST00000287008 MAGEA2P43356 314 aa17.43■□□□□ 0.38
PCDH1-201ENST00000287008 SEMA3BQ13214 749 aa17.43■□□□□ 0.38
PCDH1-201ENST00000287008 MELKQ14680 651 aa17.43■□□□□ 0.38
PCDH1-201ENST00000287008 BCL2L15Q5TBC7 163 aa17.43■□□□□ 0.38
PCDH1-201ENST00000287008 RSPO2Q6UXX9 243 aaPredicted RBP17.43■□□□□ 0.38
PCDH1-201ENST00000287008 BEND4Q6ZU67 534 aa17.43■□□□□ 0.38
PCDH1-201ENST00000287008 OR14A16Q8NHC5 309 aa17.43■□□□□ 0.38
PCDH1-201ENST00000287008 DHRS4Q9BTZ2 278 aa17.43■□□□□ 0.38
PCDH1-201ENST00000287008 NUDT15Q9NV35 164 aa17.43■□□□□ 0.38
PCDH1-201ENST00000287008 PARPBPQ9NWS1 579 aa17.43■□□□□ 0.38
PCDH1-201ENST00000287008 SH3BGRL2Q9UJC5 107 aa17.43■□□□□ 0.38
PCDH1-201ENST00000287008 KANTRA0A1W2PQU2 76 aa17.43■□□□□ 0.38
PCDH1-201ENST00000287008 TLCD2A6NGC4 264 aa17.43■□□□□ 0.38
PCDH1-201ENST00000287008 GLO1Q04760 184 aa17.43■□□□□ 0.38
PCDH1-201ENST00000287008 OR7A5Q15622 319 aa17.43■□□□□ 0.38
PCDH1-201ENST00000287008 STK11Q15831 433 aa17.43■□□□□ 0.38
PCDH1-201ENST00000287008 TMEM69Q5SWH9 247 aa17.43■□□□□ 0.38
PCDH1-201ENST00000287008 FCAMRQ8WWV6 532 aa17.43■□□□□ 0.38
PCDH1-201ENST00000287008 GATAD2BQ8WXI9 593 aa17.43■□□□□ 0.38
PCDH1-201ENST00000287008 OR4K3Q96R72 315 aa17.43■□□□□ 0.38
PCDH1-201ENST00000287008 OR6C1Q96RD1 312 aa17.43■□□□□ 0.38
PCDH1-201ENST00000287008 SORT1Q99523 831 aa17.43■□□□□ 0.38
PCDH1-201ENST00000287008 POTEKPQ9BYX7 375 aa17.43■□□□□ 0.38
PCDH1-201ENST00000287008 SLC6A15Q9H2J7 730 aa17.43■□□□□ 0.38
PCDH1-201ENST00000287008 USP36Q9P275 1121 aaKnown RBP17.43■□□□□ 0.38
PCDH1-201ENST00000287008 SPEF1Q9Y4P9 236 aa17.43■□□□□ 0.38
PCDH1-201ENST00000287008 CD79AP11912 226 aa17.42■□□□□ 0.38
PCDH1-201ENST00000287008 ABOP16442 354 aa17.42■□□□□ 0.38
PCDH1-201ENST00000287008 TCN2P20062 427 aa17.42■□□□□ 0.38
PCDH1-201ENST00000287008 GPX3P22352 226 aa17.42■□□□□ 0.38
PCDH1-201ENST00000287008 GNRHRP30968 328 aa17.42■□□□□ 0.38
PCDH1-201ENST00000287008 RAB38P57729 211 aa17.42■□□□□ 0.38
PCDH1-201ENST00000287008 SSX6Q7RTT6 188 aa17.42■□□□□ 0.38
PCDH1-201ENST00000287008 CPOQ8IVL8 374 aa17.42■□□□□ 0.38
PCDH1-201ENST00000287008 DDX51Q8N8A6 666 aaKnown RBP eCLIP17.42■□□□□ 0.38
PCDH1-201ENST00000287008 DNAAF1Q8NEP3 725 aa17.42■□□□□ 0.38
PCDH1-201ENST00000287008 ABHD5Q8WTS1 349 aa17.42■□□□□ 0.38
PCDH1-201ENST00000287008 KLHL15Q96M94 604 aa17.42■□□□□ 0.38
PCDH1-201ENST00000287008 SLC6A17Q9H1V8 727 aa17.42■□□□□ 0.38
PCDH1-201ENST00000287008 H0YIV9 168 aa17.42■□□□□ 0.38
PCDH1-201ENST00000287008 DCNP07585 359 aaKnown RBP17.42■□□□□ 0.38
PCDH1-201ENST00000287008 RUNDC3AQ59EK9 446 aa17.42■□□□□ 0.38
PCDH1-201ENST00000287008 ABHD12BQ7Z5M8 362 aaPredicted RBP17.42■□□□□ 0.38
PCDH1-201ENST00000287008 ANKK1Q8NFD2 765 aa17.42■□□□□ 0.38
PCDH1-201ENST00000287008 ZNF420Q8TAQ5 688 aaPredicted RBP17.42■□□□□ 0.38
PCDH1-201ENST00000287008 HEMK1Q9Y5R4 338 aaPredicted RBP17.42■□□□□ 0.38
PCDH1-201ENST00000287008 GPR45Q9Y5Y3 372 aa17.42■□□□□ 0.38
PCDH1-201ENST00000287008 TIAM2Q8IVF5 1701 aa17.42■□□□□ 0.38
PCDH1-201ENST00000287008 J3QRK9 145 aa17.42■□□□□ 0.38
PCDH1-201ENST00000287008 SLC19A2O60779 497 aa17.42■□□□□ 0.38
PCDH1-201ENST00000287008 TMEM225BP0DP42 221 aa17.42■□□□□ 0.38
PCDH1-201ENST00000287008 DCTP40126 519 aa17.42■□□□□ 0.38
PCDH1-201ENST00000287008 MAGEA8P43361 318 aa17.42■□□□□ 0.38
PCDH1-201ENST00000287008 FASLGP48023 281 aa17.42■□□□□ 0.38
PCDH1-201ENST00000287008 CCNJQ5T5M9 372 aa17.42■□□□□ 0.38
PCDH1-201ENST00000287008 PLPP6Q8IY26 295 aa17.42■□□□□ 0.38
PCDH1-201ENST00000287008 UBXN10Q96LJ8 280 aa17.42■□□□□ 0.38
PCDH1-201ENST00000287008 DCBLD2Q96PD2 775 aa17.42■□□□□ 0.38
PCDH1-201ENST00000287008 EURLQ9NYK6 297 aa17.42■□□□□ 0.38
PCDH1-201ENST00000287008 KCNS2Q9ULS6 477 aa17.42■□□□□ 0.38
PCDH1-201ENST00000287008 PCDHGA7Q9Y5G6 932 aa17.42■□□□□ 0.38
PCDH1-201ENST00000287008 MEGF11A6BM72 1044 aa17.41■□□□□ 0.38
PCDH1-201ENST00000287008 AIFM1O95831 613 aa17.41■□□□□ 0.38
PCDH1-201ENST00000287008 SLC5A2P31639 672 aa17.41■□□□□ 0.38
PCDH1-201ENST00000287008 UGT2B10P36537 528 aa17.41■□□□□ 0.38
PCDH1-201ENST00000287008 MAP2K4P45985 399 aa17.41■□□□□ 0.38
PCDH1-201ENST00000287008 CSNK1A1P48729 337 aa17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms