RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 CYC1P08574 325 aa15.13■□□□□ 0.01
TPM1-201ENST00000267996 RYKP34925 604 aa15.13■□□□□ 0.01
TPM1-201ENST00000267996 GPR143P51810 404 aa15.13■□□□□ 0.01
TPM1-201ENST00000267996 DCAF7P61962 342 aa15.13■□□□□ 0.01
TPM1-201ENST00000267996 PLAURQ03405 335 aa15.13■□□□□ 0.01
TPM1-201ENST00000267996 NPRL3Q12980 569 aa15.13■□□□□ 0.01
TPM1-201ENST00000267996 ILKQ13418 452 aa15.13■□□□□ 0.01
TPM1-201ENST00000267996 ZSWIM7Q19AV6 140 aa15.13■□□□□ 0.01
TPM1-201ENST00000267996 KCTD21Q4G0X4 260 aa15.13■□□□□ 0.01
TPM1-201ENST00000267996 LCN10Q6JVE6 187 aa15.13■□□□□ 0.01
TPM1-201ENST00000267996 MRPL14Q6P1L8 145 aaKnown RBP15.13■□□□□ 0.01
TPM1-201ENST00000267996 PODNL1Q6PEZ8 512 aa15.13■□□□□ 0.01
TPM1-201ENST00000267996 LANCL3Q6ZV70 420 aa15.13■□□□□ 0.01
TPM1-201ENST00000267996 GRAMD2AQ8IUY3 354 aa15.13■□□□□ 0.01
TPM1-201ENST00000267996 LINC00471Q8N535 108 aa15.13■□□□□ 0.01
TPM1-201ENST00000267996 AQP11Q8NBQ7 271 aa15.13■□□□□ 0.01
TPM1-201ENST00000267996 OR1N1Q8NGS0 311 aa15.13■□□□□ 0.01
TPM1-201ENST00000267996 OIT3Q8WWZ8 545 aa15.13■□□□□ 0.01
TPM1-201ENST00000267996 SPSB2Q99619 263 aa15.13■□□□□ 0.01
TPM1-201ENST00000267996 EDEM2Q9BV94 578 aa15.13■□□□□ 0.01
TPM1-201ENST00000267996 PRR14Q9BWN1 585 aa15.13■□□□□ 0.01
TPM1-201ENST00000267996 POLR2J2Q9GZM3 115 aaKnown RBP15.13■□□□□ 0.01
TPM1-201ENST00000267996 POLR2J3Q9H1A7 115 aaKnown RBP15.13■□□□□ 0.01
TPM1-201ENST00000267996 MGAT4BQ9UQ53 548 aa15.13■□□□□ 0.01
TPM1-201ENST00000267996 WDR87Q6ZQQ6 2873 aa15.13■□□□□ 0.01
TPM1-201ENST00000267996 FRG2CA6NGY1 282 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 A6NHS1 94 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 OR6C76A6NM76 312 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 AP3D1O14617 1153 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 FMO6PO60774 539 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 CYP7B1O75881 506 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 OR5F1O95221 314 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 ADAP00813 363 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 GASTP01350 101 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 HEXBP07686 556 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 CCNYL3P0C7X3 344 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 ZNF28P17035 718 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 EPHA2P29317 976 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 ATP12AP54707 1039 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 PSMD4P55036 377 aaKnown RBP15.12■□□□□ 0.01
TPM1-201ENST00000267996 TAS2R41P59536 307 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 ISL1P61371 349 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 E2F1Q01094 437 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 IL1RL1Q01638 556 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 APOFQ13790 326 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 EBPQ15125 230 aaKnown RBP15.12■□□□□ 0.01
TPM1-201ENST00000267996 ENTPD8Q5MY95 495 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 TTC33Q6PID6 262 aaPredicted RBP15.12■□□□□ 0.01
TPM1-201ENST00000267996 ISLR2Q6UXK2 745 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 SHISA6Q6ZSJ9 500 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 ANKRD37Q7Z713 158 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 SLC35B4Q969S0 331 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 LCORQ96JN0 433 aaPredicted RBP15.12■□□□□ 0.01
TPM1-201ENST00000267996 MCHR1Q99705 422 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 DGCR6LQ9BY27 220 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 ARMC7Q9H6L4 198 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 ZNF556Q9HAH1 456 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 PPIEQ9UNP9 301 aaKnown RBP15.12■□□□□ 0.01
TPM1-201ENST00000267996 OR10H1Q9Y4A9 318 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 HSPE1-MOB4S4R3N1 261 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 TNFRSF10AO00220 468 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 ALOX12BO75342 701 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 AGXTP21549 392 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 EMP2P54851 167 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 FOXL2P58012 376 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 ST3GAL3Q11203 375 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 RAPSNQ13702 412 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 TRAM2Q15035 370 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 NNATQ16517 81 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 PDZK1Q5T2W1 519 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 PGBD2Q6P3X8 592 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 C9orf40Q8IXQ3 194 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 ZNF786Q8N393 782 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 NFAM1Q8NET5 270 aaPredicted RBP15.12■□□□□ 0.01
TPM1-201ENST00000267996 TOR1AIP2Q8NFQ8 470 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 HRASLS5Q96KN8 279 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 CDC6Q99741 560 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 NXF5Q9H1B4 397 aaKnown RBP15.12■□□□□ 0.01
TPM1-201ENST00000267996 WDR54Q9H977 334 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.12■□□□□ 0.01
TPM1-201ENST00000267996 SEMA4GQ9NTN9 838 aa15.12■□□□□ 0.01
TPM1-201ENST00000267996 KIF26BQ2KJY2 2108 aa15.11■□□□□ 0.01
TPM1-201ENST00000267996 TO15178 435 aa15.11■□□□□ 0.01
TPM1-201ENST00000267996 BCAS1O75363 584 aaPredicted RBP15.11■□□□□ 0.01
TPM1-201ENST00000267996 SEC24DO94855 1032 aaPredicted RBP15.11■□□□□ 0.01
TPM1-201ENST00000267996 IL33O95760 270 aa15.11■□□□□ 0.01
TPM1-201ENST00000267996 THY1P04216 161 aa15.11■□□□□ 0.01
TPM1-201ENST00000267996 CYP4B1P13584 511 aa15.11■□□□□ 0.01
TPM1-201ENST00000267996 RFX3P48380 749 aa15.11■□□□□ 0.01
TPM1-201ENST00000267996 RPP38P78345 283 aaKnown RBP15.11■□□□□ 0.01
TPM1-201ENST00000267996 HOXC5Q00444 222 aa15.11■□□□□ 0.01
TPM1-201ENST00000267996 CD47Q08722 323 aa15.11■□□□□ 0.01
TPM1-201ENST00000267996 DECR1Q16698 335 aa15.11■□□□□ 0.01
TPM1-201ENST00000267996 CDCP2Q5VXM1 449 aa15.11■□□□□ 0.01
TPM1-201ENST00000267996 ZNF517Q6ZMY9 492 aaPredicted RBP15.11■□□□□ 0.01
TPM1-201ENST00000267996 ZNF441Q8N8Z8 693 aa15.11■□□□□ 0.01
TPM1-201ENST00000267996 SETD9Q8NE22 299 aa15.11■□□□□ 0.01
TPM1-201ENST00000267996 ADAMTS16Q8TE57 1224 aa15.11■□□□□ 0.01
TPM1-201ENST00000267996 CMKLR1Q99788 373 aa15.11■□□□□ 0.01
TPM1-201ENST00000267996 SEMA4CQ9C0C4 833 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms