RNA–Protein interactions for RNA: ENST00000260653.4

SIX3-201, Transcript of SIX homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIX3, Length 2,523 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX3-201ENST00000260653 GRK6P43250 576 aa20.7■□□□□ 0.9
SIX3-201ENST00000260653 ZNF136P52737 540 aa20.7■□□□□ 0.9
SIX3-201ENST00000260653 PLAURQ03405 335 aa20.7■□□□□ 0.9
SIX3-201ENST00000260653 CDK5R2Q13319 367 aa20.7■□□□□ 0.9
SIX3-201ENST00000260653 NADK2Q4G0N4 442 aa20.7■□□□□ 0.9
SIX3-201ENST00000260653 MORN4Q8NDC4 146 aa20.7■□□□□ 0.9
SIX3-201ENST00000260653 OR7G1Q8NGA0 311 aa20.7■□□□□ 0.9
SIX3-201ENST00000260653 OR4K5Q8NGD3 323 aa20.7■□□□□ 0.9
SIX3-201ENST00000260653 A0A087WXM4 84 aa20.7■□□□□ 0.9
SIX3-201ENST00000260653 AP3D1O14617 1153 aa20.7■□□□□ 0.9
SIX3-201ENST00000260653 NTN1O95631 604 aa20.7■□□□□ 0.9
SIX3-201ENST00000260653 GKN3PP0CG01 181 aa20.7■□□□□ 0.9
SIX3-201ENST00000260653 PRG2P13727 222 aa20.7■□□□□ 0.9
SIX3-201ENST00000260653 NR1H2P55055 460 aa20.7■□□□□ 0.9
SIX3-201ENST00000260653 ELAVL1Q15717 326 aaKnown RBP20.7■□□□□ 0.9
SIX3-201ENST00000260653 PDZK1Q5T2W1 519 aa20.7■□□□□ 0.9
SIX3-201ENST00000260653 PLEKHM3Q6ZWE6 761 aa20.7■□□□□ 0.9
SIX3-201ENST00000260653 ZNF614Q8N883 585 aa20.7■□□□□ 0.9
SIX3-201ENST00000260653 SLC2A12Q8TD20 617 aa20.7■□□□□ 0.9
SIX3-201ENST00000260653 PRODH2Q9UF12 536 aa20.7■□□□□ 0.9
SIX3-201ENST00000260653 MGAT4BQ9UQ53 548 aa20.7■□□□□ 0.9
SIX3-201ENST00000260653 OR10H1Q9Y4A9 318 aa20.7■□□□□ 0.9
SIX3-201ENST00000260653 CYP7B1O75881 506 aa20.69■□□□□ 0.9
SIX3-201ENST00000260653 DDAH2O95865 285 aa20.69■□□□□ 0.9
SIX3-201ENST00000260653 NKAIN1Q4KMZ8 207 aa20.69■□□□□ 0.9
SIX3-201ENST00000260653 RBM48Q5RL73 367 aaKnown RBP20.69■□□□□ 0.9
SIX3-201ENST00000260653 LSRQ86X29 649 aaPredicted RBP20.69■□□□□ 0.9
SIX3-201ENST00000260653 PPP1R3BQ86XI6 285 aa20.69■□□□□ 0.9
SIX3-201ENST00000260653 ZSCAN1Q8NBB4 408 aa20.69■□□□□ 0.9
SIX3-201ENST00000260653 STT3BQ8TCJ2 826 aa20.69■□□□□ 0.9
SIX3-201ENST00000260653 SGCDQ92629 289 aa20.69■□□□□ 0.9
SIX3-201ENST00000260653 PMM1Q92871 262 aa20.69■□□□□ 0.9
SIX3-201ENST00000260653 LOXL4Q96JB6 756 aa20.69■□□□□ 0.9
SIX3-201ENST00000260653 LMF1Q96S06 567 aa20.69■□□□□ 0.9
SIX3-201ENST00000260653 CTRCQ99895 268 aa20.69■□□□□ 0.9
SIX3-201ENST00000260653 RASSF1Q9NS23 344 aa20.69■□□□□ 0.9
SIX3-201ENST00000260653 CBLCQ9ULV8 474 aa20.69■□□□□ 0.9
SIX3-201ENST00000260653 IMPDH2P12268 514 aa20.69■□□□□ 0.9
SIX3-201ENST00000260653 EEF1B2P24534 225 aaKnown RBP20.69■□□□□ 0.9
SIX3-201ENST00000260653 HLCSP50747 726 aa20.69■□□□□ 0.9
SIX3-201ENST00000260653 UGT2B15P54855 530 aa20.69■□□□□ 0.9
SIX3-201ENST00000260653 TUBA4AP68366 448 aa20.69■□□□□ 0.9
SIX3-201ENST00000260653 TARDBPQ13148 414 aaKnown RBP eCLIP20.69■□□□□ 0.9
SIX3-201ENST00000260653 LAIR1Q6GTX8 287 aa20.69■□□□□ 0.9
SIX3-201ENST00000260653 LANCL3Q6ZV70 420 aa20.69■□□□□ 0.9
SIX3-201ENST00000260653 ARSGQ96EG1 525 aa20.69■□□□□ 0.9
SIX3-201ENST00000260653 PCDHGA5Q9Y5G8 931 aa20.69■□□□□ 0.9
SIX3-201ENST00000260653 HSPE1-MOB4S4R3N1 261 aa20.69■□□□□ 0.9
SIX3-201ENST00000260653 CFAP54Q96N23 3096 aa20.69■□□□□ 0.9
SIX3-201ENST00000260653 RALGAPA1Q6GYQ0 2036 aa20.68■□□□□ 0.9
SIX3-201ENST00000260653 TRIM64CA6NLI5 447 aa20.68■□□□□ 0.9
SIX3-201ENST00000260653 SLC1A7O00341 560 aa20.68■□□□□ 0.9
SIX3-201ENST00000260653 DYRK3O43781 588 aa20.68■□□□□ 0.9
SIX3-201ENST00000260653 THY1P04216 161 aa20.68■□□□□ 0.9
SIX3-201ENST00000260653 IGKV3-11P04433 115 aa20.68■□□□□ 0.9
SIX3-201ENST00000260653 GGT2P36268 569 aa20.68■□□□□ 0.9
SIX3-201ENST00000260653 MAD2L1BPQ15013 274 aaPredicted RBP20.68■□□□□ 0.9
SIX3-201ENST00000260653 FAAH2Q6GMR7 532 aa20.68■□□□□ 0.9
SIX3-201ENST00000260653 BCORP1Q8N888 145 aa20.68■□□□□ 0.9
SIX3-201ENST00000260653 ZNF721Q8TF20 911 aa20.68■□□□□ 0.9
SIX3-201ENST00000260653 KMT2EQ8IZD2 1858 aa20.68■□□□□ 0.9
SIX3-201ENST00000260653 A0A087WUU8 490 aa20.68■□□□□ 0.9
SIX3-201ENST00000260653 OR6B1O95007 311 aa20.68■□□□□ 0.9
SIX3-201ENST00000260653 LDOC1O95751 146 aaPredicted RBP20.68■□□□□ 0.9
SIX3-201ENST00000260653 ZNF883P0CG24 379 aa20.68■□□□□ 0.9
SIX3-201ENST00000260653 FMO3P31513 532 aa20.68■□□□□ 0.9
SIX3-201ENST00000260653 CSTF2P33240 577 aaKnown RBP eCLIP20.68■□□□□ 0.9
SIX3-201ENST00000260653 ST3GAL3Q11203 375 aa20.68■□□□□ 0.9
SIX3-201ENST00000260653 CLPPQ16740 277 aaPredicted RBP20.68■□□□□ 0.9
SIX3-201ENST00000260653 ENTHD1Q8IYW4 607 aa20.68■□□□□ 0.9
SIX3-201ENST00000260653 UCK2Q9BZX2 261 aa20.68■□□□□ 0.9
SIX3-201ENST00000260653 TUBA8Q9NY65 449 aaPredicted RBP20.68■□□□□ 0.9
SIX3-201ENST00000260653 REV1Q9UBZ9 1251 aa20.68■□□□□ 0.9
SIX3-201ENST00000260653 FAM86C2PA6NEL3 165 aa20.67■□□□□ 0.9
SIX3-201ENST00000260653 EFCAB7A8K855 629 aa20.67■□□□□ 0.9
SIX3-201ENST00000260653 SOX14O95416 240 aa20.67■□□□□ 0.9
SIX3-201ENST00000260653 ANGPTL1O95841 491 aa20.67■□□□□ 0.9
SIX3-201ENST00000260653 CHMP24386 653 aa20.67■□□□□ 0.9
SIX3-201ENST00000260653 RORAP35398 523 aa20.67■□□□□ 0.9
SIX3-201ENST00000260653 PLA2G2CQ5R387 149 aa20.67■□□□□ 0.9
SIX3-201ENST00000260653 DBX2Q6ZNG2 339 aa20.67■□□□□ 0.9
SIX3-201ENST00000260653 ZER1Q7Z7L7 766 aa20.67■□□□□ 0.9
SIX3-201ENST00000260653 APLFQ8IW19 511 aaPredicted RBP20.67■□□□□ 0.9
SIX3-201ENST00000260653 BPIFB6Q8NFQ5 453 aa20.67■□□□□ 0.9
SIX3-201ENST00000260653 FAM81AQ8TBF8 368 aa20.67■□□□□ 0.9
SIX3-201ENST00000260653 RHBDD1Q8TEB9 315 aa20.67■□□□□ 0.9
SIX3-201ENST00000260653 NR4A3Q92570 626 aa20.67■□□□□ 0.9
SIX3-201ENST00000260653 DGCR6LQ9BY27 220 aa20.67■□□□□ 0.9
SIX3-201ENST00000260653 TGIF2Q9GZN2 237 aa20.67■□□□□ 0.9
SIX3-201ENST00000260653 IGLV3-12A0A075B6K2 115 aa20.67■□□□□ 0.9
SIX3-201ENST00000260653 XPNPEP2O43895 674 aa20.67■□□□□ 0.9
SIX3-201ENST00000260653 ZGLP1P0C6A0 271 aa20.67■□□□□ 0.9
SIX3-201ENST00000260653 MMP11P24347 488 aa20.67■□□□□ 0.9
SIX3-201ENST00000260653 HTR2AP28223 471 aa20.67■□□□□ 0.9
SIX3-201ENST00000260653 IDH2P48735 452 aaKnown RBP20.67■□□□□ 0.9
SIX3-201ENST00000260653 TRAM2Q15035 370 aa20.67■□□□□ 0.9
SIX3-201ENST00000260653 PTGES3Q15185 160 aaKnown RBP20.67■□□□□ 0.9
SIX3-201ENST00000260653 NKAIN4Q8IVV8 208 aa20.67■□□□□ 0.9
SIX3-201ENST00000260653 SLC38A4Q969I6 547 aa20.67■□□□□ 0.9
SIX3-201ENST00000260653 FKBP10Q96AY3 582 aa20.67■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms