RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 ZFP28Q8NHY6 868 aa18.98■□□□□ 0.63
NEDD8-201ENST00000250495 GPR151Q8TDV0 419 aa18.98■□□□□ 0.63
NEDD8-201ENST00000250495 GFM2Q969S9 779 aaKnown RBP18.98■□□□□ 0.63
NEDD8-201ENST00000250495 POM121Q96HA1 1249 aa18.98■□□□□ 0.63
NEDD8-201ENST00000250495 ZNF845Q96IR2 970 aaPredicted RBP18.98■□□□□ 0.63
NEDD8-201ENST00000250495 DLL4Q9NR61 685 aa18.98■□□□□ 0.63
NEDD8-201ENST00000250495 BEX4Q9NWD9 120 aaPredicted RBP18.98■□□□□ 0.63
NEDD8-201ENST00000250495 ZNF226Q9NYT6 803 aa18.98■□□□□ 0.63
NEDD8-201ENST00000250495 TESMINQ9Y4I5 508 aa18.98■□□□□ 0.63
NEDD8-201ENST00000250495 GXYLT2A0PJZ3 443 aa18.97■□□□□ 0.63
NEDD8-201ENST00000250495 H0YC42 278 aa18.97■□□□□ 0.63
NEDD8-201ENST00000250495 AZIN1O14977 448 aa18.97■□□□□ 0.63
NEDD8-201ENST00000250495 TBX19O60806 448 aa18.97■□□□□ 0.63
NEDD8-201ENST00000250495 KRT4P19013 534 aa18.97■□□□□ 0.63
NEDD8-201ENST00000250495 CD53P19397 219 aa18.97■□□□□ 0.63
NEDD8-201ENST00000250495 MANFP55145 182 aaKnown RBP18.97■□□□□ 0.63
NEDD8-201ENST00000250495 TPD52P55327 224 aaPredicted RBP18.97■□□□□ 0.63
NEDD8-201ENST00000250495 SGCBQ16585 318 aa18.97■□□□□ 0.63
NEDD8-201ENST00000250495 ZNF474Q6S9Z5 364 aaPredicted RBP18.97■□□□□ 0.63
NEDD8-201ENST00000250495 GSPT2Q8IYD1 628 aaKnown RBP18.97■□□□□ 0.63
NEDD8-201ENST00000250495 CDRT4Q8N9R6 151 aa18.97■□□□□ 0.63
NEDD8-201ENST00000250495 PIK3R3Q92569 461 aa18.97■□□□□ 0.63
NEDD8-201ENST00000250495 ZBED6CLQ96FA7 236 aaPredicted RBP18.97■□□□□ 0.63
NEDD8-201ENST00000250495 WFIKKN1Q96NZ8 548 aa18.97■□□□□ 0.63
NEDD8-201ENST00000250495 TRMOQ9BU70 441 aa18.97■□□□□ 0.63
NEDD8-201ENST00000250495 REEP4Q9H6H4 257 aa18.97■□□□□ 0.63
NEDD8-201ENST00000250495 RNF122Q9H9V4 155 aa18.97■□□□□ 0.63
NEDD8-201ENST00000250495 EQTNQ9NQ60 294 aa18.97■□□□□ 0.63
NEDD8-201ENST00000250495 SH3BP4Q9P0V3 963 aa18.97■□□□□ 0.63
NEDD8-201ENST00000250495 RAB21Q9UL25 225 aa18.97■□□□□ 0.63
NEDD8-201ENST00000250495 NF1P21359 2839 aa18.96■□□□□ 0.63
NEDD8-201ENST00000250495 A0A1W2PPR1 153 aa18.96■□□□□ 0.63
NEDD8-201ENST00000250495 NKX2-2O95096 273 aa18.96■□□□□ 0.63
NEDD8-201ENST00000250495 CHEK2O96017 543 aa18.96■□□□□ 0.63
NEDD8-201ENST00000250495 CD8BP10966 210 aa18.96■□□□□ 0.63
NEDD8-201ENST00000250495 NEFHP12036 1026 aa18.96■□□□□ 0.63
NEDD8-201ENST00000250495 POU2F1P14859 743 aa18.96■□□□□ 0.63
NEDD8-201ENST00000250495 HOXC12P31275 282 aa18.96■□□□□ 0.63
NEDD8-201ENST00000250495 MAP3K8P41279 467 aa18.96■□□□□ 0.63
NEDD8-201ENST00000250495 PRKAG1P54619 331 aa18.96■□□□□ 0.63
NEDD8-201ENST00000250495 CLDN20P56880 219 aa18.96■□□□□ 0.63
NEDD8-201ENST00000250495 SIRPAP78324 504 aa18.96■□□□□ 0.63
NEDD8-201ENST00000250495 PON3Q15166 354 aa18.96■□□□□ 0.63
NEDD8-201ENST00000250495 GRAMD1BQ3KR37 738 aa18.96■□□□□ 0.63
NEDD8-201ENST00000250495 ANKRD26P1Q6NSI1 321 aa18.96■□□□□ 0.63
NEDD8-201ENST00000250495 APOOLQ6UXV4 268 aa18.96■□□□□ 0.63
NEDD8-201ENST00000250495 RNF165Q6ZSG1 346 aa18.96■□□□□ 0.63
NEDD8-201ENST00000250495 Q6ZSR9 355 aa18.96■□□□□ 0.63
NEDD8-201ENST00000250495 METTL25Q8N6Q8 603 aa18.96■□□□□ 0.63
NEDD8-201ENST00000250495 NUP43Q8NFH3 380 aa18.96■□□□□ 0.63
NEDD8-201ENST00000250495 FNDC9Q8TBE3 224 aa18.96■□□□□ 0.63
NEDD8-201ENST00000250495 HOXB13Q92826 284 aaPredicted RBP18.96■□□□□ 0.63
NEDD8-201ENST00000250495 PPCDCQ96CD2 204 aa18.96■□□□□ 0.63
NEDD8-201ENST00000250495 FCRL1Q96LA6 429 aa18.96■□□□□ 0.63
NEDD8-201ENST00000250495 CCT7Q99832 543 aa18.96■□□□□ 0.63
NEDD8-201ENST00000250495 OPN3Q9H1Y3 402 aaPredicted RBP18.96■□□□□ 0.63
NEDD8-201ENST00000250495 C12orf65Q9H3J6 166 aaKnown RBP18.96■□□□□ 0.63
NEDD8-201ENST00000250495 SMIM23A6NLE4 172 aa18.95■□□□□ 0.62
NEDD8-201ENST00000250495 AKAP10O43572 662 aa18.95■□□□□ 0.62
NEDD8-201ENST00000250495 TRIM13O60858 407 aa18.95■□□□□ 0.62
NEDD8-201ENST00000250495 IGKV1D-16P01601 117 aa18.95■□□□□ 0.62
NEDD8-201ENST00000250495 FCGR2AP12318 317 aa18.95■□□□□ 0.62
NEDD8-201ENST00000250495 KCNJ5P48544 419 aa18.95■□□□□ 0.62
NEDD8-201ENST00000250495 SLC18A2Q05940 514 aa18.95■□□□□ 0.62
NEDD8-201ENST00000250495 EXOC3L1Q86VI1 746 aa18.95■□□□□ 0.62
NEDD8-201ENST00000250495 C10orf107Q8IVU9 208 aa18.95■□□□□ 0.62
NEDD8-201ENST00000250495 WFDC11Q8NEX6 87 aa18.95■□□□□ 0.62
NEDD8-201ENST00000250495 SLC9A6Q92581 669 aa18.95■□□□□ 0.62
NEDD8-201ENST00000250495 CIDECQ96AQ7 238 aaPredicted RBP18.95■□□□□ 0.62
NEDD8-201ENST00000250495 MED18Q9BUE0 208 aa18.95■□□□□ 0.62
NEDD8-201ENST00000250495 GATA5Q9BWX5 397 aaPredicted RBP18.95■□□□□ 0.62
NEDD8-201ENST00000250495 ACSS1Q9NUB1 689 aaPredicted RBP18.95■□□□□ 0.62
NEDD8-201ENST00000250495 KLHL28Q9NXS3 571 aa18.95■□□□□ 0.62
NEDD8-201ENST00000250495 NTMQ9P121 344 aa18.95■□□□□ 0.62
NEDD8-201ENST00000250495 PROCRQ9UNN8 238 aa18.95■□□□□ 0.62
NEDD8-201ENST00000250495 TMED5Q9Y3A6 229 aa18.95■□□□□ 0.62
NEDD8-201ENST00000250495 FIS1Q9Y3D6 152 aa18.95■□□□□ 0.62
NEDD8-201ENST00000250495 PTGDR2Q9Y5Y4 395 aa18.95■□□□□ 0.62
NEDD8-201ENST00000250495 A0A087WZY1 265 aa18.94■□□□□ 0.62
NEDD8-201ENST00000250495 ALG1L2C9J202 215 aa18.94■□□□□ 0.62
NEDD8-201ENST00000250495 C16orf97H3BN30 126 aa18.94■□□□□ 0.62
NEDD8-201ENST00000250495 ATP8B1O43520 1251 aa18.94■□□□□ 0.62
NEDD8-201ENST00000250495 NDUFB5O43674 189 aa18.94■□□□□ 0.62
NEDD8-201ENST00000250495 CGAP01215 116 aa18.94■□□□□ 0.62
NEDD8-201ENST00000250495 NGFRP08138 427 aa18.94■□□□□ 0.62
NEDD8-201ENST00000250495 DDX5P17844 614 aaKnown RBP18.94■□□□□ 0.62
NEDD8-201ENST00000250495 SDC1P18827 310 aa18.94■□□□□ 0.62
NEDD8-201ENST00000250495 UGT2B10P36537 528 aa18.94■□□□□ 0.62
NEDD8-201ENST00000250495 ASMTP46597 345 aa18.94■□□□□ 0.62
NEDD8-201ENST00000250495 TMEM44Q2T9K0 475 aa18.94■□□□□ 0.62
NEDD8-201ENST00000250495 RFTN2Q52LD8 501 aaPredicted RBP18.94■□□□□ 0.62
NEDD8-201ENST00000250495 SHEQ5VZ18 495 aa18.94■□□□□ 0.62
NEDD8-201ENST00000250495 ZCCHC12Q6PEW1 402 aa18.94■□□□□ 0.62
NEDD8-201ENST00000250495 FAM214BQ7L5A3 538 aa18.94■□□□□ 0.62
NEDD8-201ENST00000250495 C4orf33Q8N1A6 199 aa18.94■□□□□ 0.62
NEDD8-201ENST00000250495 ZNF610Q8N9Z0 462 aa18.94■□□□□ 0.62
NEDD8-201ENST00000250495 OR6Y1Q8NGX8 325 aa18.94■□□□□ 0.62
NEDD8-201ENST00000250495 MTERF3Q96E29 417 aa18.94■□□□□ 0.62
NEDD8-201ENST00000250495 TSSK3Q96PN8 268 aa18.94■□□□□ 0.62
NEDD8-201ENST00000250495 PRRG4Q9BZD6 226 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms