RNA–Protein interactions for RNA: ENST00000237289.8

TNFAIP3-201, Transcript of TNF alpha induced protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFAIP3, Length 4,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-201ENST00000237289 PHF10Q8WUB8 498 aaKnown RBP10.27□□□□□ -0.76
TNFAIP3-201ENST00000237289 OSBPL11Q9BXB4 747 aa10.27□□□□□ -0.76
TNFAIP3-201ENST00000237289 A4GALTQ9NPC4 353 aa10.27□□□□□ -0.76
TNFAIP3-201ENST00000237289 CTPS2Q9NRF8 586 aa10.27□□□□□ -0.76
TNFAIP3-201ENST00000237289 NUP214P35658 2090 aaPredicted RBP10.27□□□□□ -0.76
TNFAIP3-201ENST00000237289 APC2O95996 2303 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 TRAV17A0A0B4J275 112 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 FABP3P05413 133 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 CXCR1P25024 350 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 IFNGR2P38484 337 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 FRKP42685 505 aaPredicted RBP10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 NUP107P57740 925 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 KCNJ10P78508 379 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 SNTA1Q13424 505 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 KPNB1Q14974 876 aaKnown RBP10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 OR5M10Q6IEU7 315 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 ZFP1Q6P2D0 407 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 MISPQ8IVT2 679 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 ARHGEF39Q8N4T4 335 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 OR4N2Q8NGD1 307 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 OR1J4Q8NGS1 313 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 TTC9Q92623 222 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 BDH2Q9BUT1 245 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 PRRG4Q9BZD6 226 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 TMEM38AQ9H6F2 299 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 GPATCH2Q9NW75 528 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 SCN2AQ99250 2005 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 LOC102723996A0A087X1L8 192 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 SOCS6O14544 535 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 CDC40O60508 579 aaKnown RBP eCLIP10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 PRKD3O94806 890 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 C17orf67Q0P5P2 114 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 CEACAM7Q14002 265 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 C9orf40Q8IXQ3 194 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 DUSP19Q8WTR2 217 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 RASL10BQ96S79 203 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 AP4S1Q9Y587 144 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 ASPDHA6ND91 283 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 ELOA3DA6NLF2 546 aaPredicted RBP10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 C1QTNF9BB2RNN3 333 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 TGFBR3LH3BV60 316 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 MASP2O00187 686 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 TFECO14948 347 aaPredicted RBP10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 LDLRP01130 860 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 HIST1H2ABP04908 130 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 C1QTNF9P0C862 333 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 SLC7A1P30825 629 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 YAP1P46937 504 aaKnown RBP10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 SPIBQ01892 262 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 PRSS53Q2L4Q9 553 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 ELOA3BQ3SY89 546 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 RAET1LQ5VY80 246 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 HIST3H2AQ7L7L0 130 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 ELOA3Q8NG57 546 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 OR14L1PQ8NHC6 308 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 HIST1H2ACQ93077 130 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 SLC7A6OSQ96CW6 309 aaPredicted RBP10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 ZNF597Q96LX8 424 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 VSTM2LQ96N03 204 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 LMF2Q9BU23 707 aaKnown RBP10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 CNIH4Q9P003 139 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 SLC7A8Q9UHI5 535 aa10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 SPIN1Q9Y657 262 aaPredicted RBP10.27□□□□□ -0.77
TNFAIP3-201ENST00000237289 TLX3O43711 291 aaPredicted RBP10.26□□□□□ -0.77
TNFAIP3-201ENST00000237289 FKBP6O75344 327 aa10.26□□□□□ -0.77
TNFAIP3-201ENST00000237289 OR6A2O95222 327 aa10.26□□□□□ -0.77
TNFAIP3-201ENST00000237289 IL33O95760 270 aa10.26□□□□□ -0.77
TNFAIP3-201ENST00000237289 GDF1P27539 372 aa10.26□□□□□ -0.77
TNFAIP3-201ENST00000237289 GPR85P60893 370 aa10.26□□□□□ -0.77
TNFAIP3-201ENST00000237289 CAMK2BQ13554 666 aa10.26□□□□□ -0.77
TNFAIP3-201ENST00000237289 CEBPEQ15744 281 aa10.26□□□□□ -0.77
TNFAIP3-201ENST00000237289 GRAMD1BQ3KR37 738 aa10.26□□□□□ -0.77
TNFAIP3-201ENST00000237289 ZZZ3Q8IYH5 903 aa10.26□□□□□ -0.77
TNFAIP3-201ENST00000237289 OR10Q1Q8NGQ4 319 aa10.26□□□□□ -0.77
TNFAIP3-201ENST00000237289 PSMA8Q8TAA3 256 aa10.26□□□□□ -0.77
TNFAIP3-201ENST00000237289 HSH2DQ96JZ2 352 aa10.26□□□□□ -0.77
TNFAIP3-201ENST00000237289 ZNF583Q96ND8 569 aa10.26□□□□□ -0.77
TNFAIP3-201ENST00000237289 MCHR1Q99705 422 aa10.26□□□□□ -0.77
TNFAIP3-201ENST00000237289 ZNF71Q9NQZ8 489 aaPredicted RBP10.26□□□□□ -0.77
TNFAIP3-201ENST00000237289 SLC6A13Q9NSD5 602 aa10.26□□□□□ -0.77
TNFAIP3-201ENST00000237289 AQP12BA6NM10 295 aa10.26□□□□□ -0.77
TNFAIP3-201ENST00000237289 GPIP06744 558 aa10.26□□□□□ -0.77
TNFAIP3-201ENST00000237289 ZNF23P17027 643 aa10.26□□□□□ -0.77
TNFAIP3-201ENST00000237289 LCN1P31025 176 aa10.26□□□□□ -0.77
TNFAIP3-201ENST00000237289 KCNC4Q03721 635 aa10.26□□□□□ -0.77
TNFAIP3-201ENST00000237289 C19orf48Q6RUI8 117 aa10.26□□□□□ -0.77
TNFAIP3-201ENST00000237289 AQP12AQ8IXF9 295 aa10.26□□□□□ -0.77
TNFAIP3-201ENST00000237289 GRHL3Q8TE85 626 aa10.26□□□□□ -0.77
TNFAIP3-201ENST00000237289 PMM1Q92871 262 aa10.26□□□□□ -0.77
TNFAIP3-201ENST00000237289 COL5A1P20908 1838 aaPredicted RBP10.26□□□□□ -0.77
TNFAIP3-201ENST00000237289 SERINC4A6NH21 518 aa10.26□□□□□ -0.77
TNFAIP3-201ENST00000237289 CST1P01037 141 aa10.26□□□□□ -0.77
TNFAIP3-201ENST00000237289 GGT1P19440 569 aa10.26□□□□□ -0.77
TNFAIP3-201ENST00000237289 MLF1P58340 268 aa10.26□□□□□ -0.77
TNFAIP3-201ENST00000237289 ELOAQ14241 798 aaKnown RBP10.26□□□□□ -0.77
TNFAIP3-201ENST00000237289 SLC25A25Q6KCM7 469 aa10.26□□□□□ -0.77
TNFAIP3-201ENST00000237289 ZNF517Q6ZMY9 492 aaPredicted RBP10.26□□□□□ -0.77
TNFAIP3-201ENST00000237289 GPALPP1Q8IXQ4 340 aa10.26□□□□□ -0.77
TNFAIP3-201ENST00000237289 ZNF615Q8N8J6 731 aa10.26□□□□□ -0.77
TNFAIP3-201ENST00000237289 B4GALNT2Q8NHY0 566 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms