RNA–Protein interactions for RNA: ENST00000223398.10

CLIP2-201, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CLIP2, Length 5,563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-201ENST00000223398 SDR9C7Q8NEX9 313 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 MAFAQ8NHW3 353 aaPredicted RBP17.36■□□□□ 0.37
CLIP2-201ENST00000223398 BCL7CQ8WUZ0 217 aaPredicted RBP17.36■□□□□ 0.37
CLIP2-201ENST00000223398 FCAMRQ8WWV6 532 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 FAM118AQ9NWS6 357 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 PCDHGB6Q9Y5F9 930 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 KANTRA0A1W2PQU2 76 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 CD63P08962 238 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 SF3B4Q15427 424 aaKnown RBP eCLIP17.36■□□□□ 0.375e-9■■■■■ 35
CLIP2-201ENST00000223398 SLC25A25Q6KCM7 469 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 DENND6BQ8NEG7 585 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 MBNL1Q9NR56 388 aaKnown RBP17.36■□□□□ 0.37
CLIP2-201ENST00000223398 SACM1LQ9NTJ5 587 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 VAPAQ9P0L0 249 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 LRRN3E7EW58 273 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 AIFM1O95831 613 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 TCN2P20062 427 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 TUBA1BP68363 451 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 TUBA4AP68366 448 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 MFSD13AQ14CX5 517 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 METTL2BQ6P1Q9 378 aaKnown RBP17.36■□□□□ 0.37
CLIP2-201ENST00000223398 TUBA1AQ71U36 451 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 VRK2Q86Y07 508 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 THAP6Q8TBB0 222 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 TMEM239Q8WW34 195 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 C3orf30Q96M34 536 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 NUDT22Q9BRQ3 303 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 SLC6A15Q9H2J7 730 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 LRRN3Q9H3W5 708 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 MED11Q9P086 117 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 TBX21Q9UL17 535 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 A0A1W2PPW3 197 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 CSF2P04141 144 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 CD27P26842 260 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 DCKP27707 260 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 HOXA9P31269 272 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 UQCRC1P31930 480 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 MTNR1AP48039 350 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 DCDP81605 110 aaKnown RBP17.36■□□□□ 0.37
CLIP2-201ENST00000223398 SLC14A2Q15849 920 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 ZNF77Q15935 545 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 PIP5KL1Q5T9C9 394 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 MFSD9Q8NBP5 474 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 METTL2AQ96IZ6 378 aaKnown RBP17.36■□□□□ 0.37
CLIP2-201ENST00000223398 OR7D2Q96RA2 312 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 MNTQ99583 582 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 CSNK1G3Q9Y6M4 447 aa17.36■□□□□ 0.37
CLIP2-201ENST00000223398 SRPX2O60687 465 aaPredicted RBP17.35■□□□□ 0.37
CLIP2-201ENST00000223398 ERVK-25P63136 954 aa17.35■□□□□ 0.37
CLIP2-201ENST00000223398 LHX8Q68G74 356 aa17.35■□□□□ 0.37
CLIP2-201ENST00000223398 H0YAE9 185 aa17.35■□□□□ 0.37
CLIP2-201ENST00000223398 CNOT4O95628 575 aaKnown RBP17.35■□□□□ 0.37
CLIP2-201ENST00000223398 SLC5A2P31639 672 aa17.35■□□□□ 0.37
CLIP2-201ENST00000223398 SLC26A5P58743 744 aa17.35■□□□□ 0.37
CLIP2-201ENST00000223398 SELENOWP63302 87 aa17.35■□□□□ 0.37
CLIP2-201ENST00000223398 ZNF423Q2M1K9 1284 aa17.35■□□□□ 0.37
CLIP2-201ENST00000223398 OPN5Q6U736 354 aa17.35■□□□□ 0.37
CLIP2-201ENST00000223398 RCBTB1Q8NDN9 531 aa17.35■□□□□ 0.37
CLIP2-201ENST00000223398 KCNN1Q92952 543 aa17.35■□□□□ 0.37
CLIP2-201ENST00000223398 PINK1Q9BXM7 581 aa17.35■□□□□ 0.37
CLIP2-201ENST00000223398 ZNF160Q9HCG1 818 aa17.35■□□□□ 0.37
CLIP2-201ENST00000223398 C12orf4Q9NQ89 552 aa17.35■□□□□ 0.37
CLIP2-201ENST00000223398 CCDC59Q9P031 241 aaKnown RBP17.35■□□□□ 0.37
CLIP2-201ENST00000223398 MBTPS1Q14703 1052 aa17.35■□□□□ 0.37
CLIP2-201ENST00000223398 TMEM64Q6YI46 380 aa17.35■□□□□ 0.37
CLIP2-201ENST00000223398 VRK3Q8IV63 474 aa17.35■□□□□ 0.37
CLIP2-201ENST00000223398 DTWD1Q8N5C7 304 aa17.35■□□□□ 0.37
CLIP2-201ENST00000223398 FAM174AQ8TBP5 190 aa17.35■□□□□ 0.37
CLIP2-201ENST00000223398 PITHD1Q9GZP4 211 aaPredicted RBP17.35■□□□□ 0.37
CLIP2-201ENST00000223398 MYH4Q9Y623 1939 aa17.35■□□□□ 0.37
CLIP2-201ENST00000223398 ADAP00813 363 aa17.35■□□□□ 0.37
CLIP2-201ENST00000223398 AMY2BP19961 511 aa17.35■□□□□ 0.37
CLIP2-201ENST00000223398 RPS5P46782 204 aaKnown RBP17.35■□□□□ 0.37
CLIP2-201ENST00000223398 RBM39Q14498 530 aaKnown RBP17.35■□□□□ 0.37
CLIP2-201ENST00000223398 CDNFQ49AH0 187 aa17.35■□□□□ 0.37
CLIP2-201ENST00000223398 CPOQ8IVL8 374 aa17.35■□□□□ 0.37
CLIP2-201ENST00000223398 MGLLQ99685 303 aa17.35■□□□□ 0.37
CLIP2-201ENST00000223398 DNTTIP1Q9H147 329 aa17.35■□□□□ 0.37
CLIP2-201ENST00000223398 NUDT15Q9NV35 164 aa17.35■□□□□ 0.37
CLIP2-201ENST00000223398 ANKRD10Q9NXR5 420 aa17.35■□□□□ 0.37
CLIP2-201ENST00000223398 EURLQ9NYK6 297 aa17.35■□□□□ 0.37
CLIP2-201ENST00000223398 REV1Q9UBZ9 1251 aa17.35■□□□□ 0.37
CLIP2-201ENST00000223398 CARD8Q9Y2G2 431 aa17.35■□□□□ 0.37
CLIP2-201ENST00000223398 LOC102723532A0A0G2JNH3 316 aa17.34■□□□□ 0.37
CLIP2-201ENST00000223398 SYT7O43581 403 aa17.34■□□□□ 0.37
CLIP2-201ENST00000223398 JRKO75564 520 aa17.34■□□□□ 0.37
CLIP2-201ENST00000223398 SORBS2O94875 1100 aaKnown RBP17.34■□□□□ 0.37
CLIP2-201ENST00000223398 WDPCPO95876 746 aa17.34■□□□□ 0.37
CLIP2-201ENST00000223398 PRPS1P60891 318 aa17.34■□□□□ 0.37
CLIP2-201ENST00000223398 RBPJQ06330 500 aa17.34■□□□□ 0.37
CLIP2-201ENST00000223398 TUBA3CQ13748 450 aa17.34■□□□□ 0.37
CLIP2-201ENST00000223398 SPHARQ15513 63 aa17.34■□□□□ 0.37
CLIP2-201ENST00000223398 XKR5Q6UX68 686 aa17.34■□□□□ 0.37
CLIP2-201ENST00000223398 MRPL21Q7Z2W9 205 aaKnown RBP17.34■□□□□ 0.37
CLIP2-201ENST00000223398 TMEM151AQ8N4L1 468 aa17.34■□□□□ 0.37
CLIP2-201ENST00000223398 ATOH8Q96SQ7 321 aa17.34■□□□□ 0.37
CLIP2-201ENST00000223398 OBP2AQ9NY56 170 aa17.34■□□□□ 0.37
CLIP2-201ENST00000223398 TUBA8Q9NY65 449 aaPredicted RBP17.34■□□□□ 0.37
CLIP2-201ENST00000223398 HPRP00739 348 aa17.34■□□□□ 0.37
CLIP2-201ENST00000223398 RBMXP38159 391 aaKnown RBP17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms