RNA–Protein interactions for RNA: ENST00000219299.8

CCDC113-201, Transcript of coiled-coil domain containing 113, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC113, Length 5,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113-201ENST00000219299 METTL2AQ96IZ6 378 aaKnown RBP8.85□□□□□ -0.99
CCDC113-201ENST00000219299 MKKSQ9NPJ1 570 aaPredicted RBP8.85□□□□□ -0.99
CCDC113-201ENST00000219299 RHCGQ9UBD6 479 aa8.85□□□□□ -0.99
CCDC113-201ENST00000219299 A6NCN8 305 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 CPSF4LA6NMK7 179 aaKnown RBP8.84□□□□□ -0.99
CCDC113-201ENST00000219299 VILLO15195 856 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 HMGN2P05204 90 aaKnown RBP8.84□□□□□ -0.99
CCDC113-201ENST00000219299 DNASE1L1P49184 302 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 TSPAN5P62079 268 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 USF2Q15853 346 aaPredicted RBP8.84□□□□□ -0.99
CCDC113-201ENST00000219299 C6orf132Q5T0Z8 1188 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 OR51Q1Q8NH59 317 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 STOML3Q8TAV4 291 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 TMEM203Q969S6 136 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 CCDC32Q9BV29 185 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 IFT27Q9BW83 186 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 SOX17Q9H6I2 414 aaPredicted RBP8.84□□□□□ -0.99
CCDC113-201ENST00000219299 IFT46Q9NQC8 304 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 KCMF1Q9P0J7 381 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 WRBO00258 174 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 SIGLEC6O43699 453 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 SLC19A2O60779 497 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 OXSR1O95747 527 aaPredicted RBP8.84□□□□□ -0.99
CCDC113-201ENST00000219299 GPR75O95800 540 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 ANXA3P12429 323 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 FOLR3P41439 243 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 HTR2BP41595 481 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 MAP2K3P46734 347 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 NR0B1P51843 470 aaKnown RBP8.84□□□□□ -0.99
CCDC113-201ENST00000219299 GBX2P52951 348 aaPredicted RBP8.84□□□□□ -0.99
CCDC113-201ENST00000219299 CEBPGP53567 150 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 REEP5Q00765 189 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 SPRED3Q2MJR0 410 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 KLHL26Q53HC5 615 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 FAM76BQ5HYJ3 339 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 KIF18BQ86Y91 864 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 OR2T11Q8NH01 316 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 SLA2Q9H6Q3 261 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 MYNNQ9NPC7 610 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 ENAMQ9NRM1 1142 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 NUDT15Q9NV35 164 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 TEX10Q9NXF1 929 aaPredicted RBP8.84□□□□□ -0.99
CCDC113-201ENST00000219299 MBD1Q9UIS9 605 aaPredicted RBP8.84□□□□□ -0.99
CCDC113-201ENST00000219299 TP53I11O14683 189 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 FOXD2O60548 495 aaPredicted RBP8.84□□□□□ -0.99
CCDC113-201ENST00000219299 ITGA10O75578 1167 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 H1F0P07305 194 aaKnown RBP8.84□□□□□ -0.99
CCDC113-201ENST00000219299 GNAO1P09471 354 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 LINC00271P0C7V0 271 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 GBX1Q14549 363 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 PIGGQ5H8A4 983 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 ZNF782Q6ZMW2 699 aaPredicted RBP8.84□□□□□ -0.99
CCDC113-201ENST00000219299 WDR53Q7Z5U6 358 aaPredicted RBP8.84□□□□□ -0.99
CCDC113-201ENST00000219299 NAGSQ8N159 534 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 OR2A1Q8NGT9 310 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 THAP6Q8TBB0 222 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 MCHR1Q99705 422 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 AIFM2Q9BRQ8 373 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 TTYH2Q9BSA4 534 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 ASPNQ9BXN1 380 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 LOC105378220A0A1B0GUY1 285 aaPredicted RBP8.84□□□□□ -0.99
CCDC113-201ENST00000219299 C5orf51A6NDU8 294 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 A6NL46 340 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 ARHGAP33O14559 1287 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 RP2O75695 350 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 ARL6IP5O75915 188 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 SOX30O94993 753 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 AIFM1O95831 613 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 CELA2BP08218 269 aaPredicted RBP8.84□□□□□ -0.99
CCDC113-201ENST00000219299 PRKACGP22612 351 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 SLC6A12P48065 614 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 PSMA6P60900 246 aaKnown RBP8.84□□□□□ -0.99
CCDC113-201ENST00000219299 RCAN2Q14206 197 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 C18orf63Q68DL7 685 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 HACD2Q6Y1H2 254 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 OR52E4Q8NGH9 312 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 ZNF675Q8TD23 568 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 EPYCQ99645 322 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 UCK2Q9BZX2 261 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 SMURF1Q9HCE7 757 aa8.84□□□□□ -0.99
CCDC113-201ENST00000219299 GAPDHSO14556 408 aaPredicted RBP8.83□□□□□ -1
CCDC113-201ENST00000219299 GATBO75879 557 aaKnown RBP8.83□□□□□ -1
CCDC113-201ENST00000219299 CD2P06729 351 aa8.83□□□□□ -1
CCDC113-201ENST00000219299 TEAD1P28347 426 aa8.83□□□□□ -1
CCDC113-201ENST00000219299 HNRNPFP52597 415 aaKnown RBP8.83□□□□□ -1
CCDC113-201ENST00000219299 SMSP52788 366 aa8.83□□□□□ -1
CCDC113-201ENST00000219299 RPS3AP61247 264 aaKnown RBP8.83□□□□□ -1
CCDC113-201ENST00000219299 PPP3R1P63098 170 aa8.83□□□□□ -1
CCDC113-201ENST00000219299 LAPTM4AQ15012 233 aa8.83□□□□□ -1
CCDC113-201ENST00000219299 PIAS4Q8N2W9 510 aaPredicted RBP8.83□□□□□ -1
CCDC113-201ENST00000219299 ZSCAN1Q8NBB4 408 aa8.83□□□□□ -1
CCDC113-201ENST00000219299 FBXO27Q8NI29 283 aa8.83□□□□□ -1
CCDC113-201ENST00000219299 DNAJA3Q96EY1 480 aa8.83□□□□□ -1
CCDC113-201ENST00000219299 ZNF486Q96H40 463 aaPredicted RBP8.83□□□□□ -1
CCDC113-201ENST00000219299 IER2Q9BTL4 223 aa8.83□□□□□ -1
CCDC113-201ENST00000219299 FUNDC2Q9BWH2 189 aa8.83□□□□□ -1
CCDC113-201ENST00000219299 SPATA9Q9BWV2 254 aa8.83□□□□□ -1
CCDC113-201ENST00000219299 OR51V1Q9H2C8 321 aa8.83□□□□□ -1
CCDC113-201ENST00000219299 TUBB1Q9H4B7 451 aa8.83□□□□□ -1
CCDC113-201ENST00000219299 PTGES2Q9H7Z7 377 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms