RNA–Protein interactions for RNA: ENST00000211998.9

VCL-201, Transcript of vinculin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VCL, Length 5,490 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-201ENST00000211998 PLCXD1Q9NUJ7 323 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 FBXL12Q9NXK8 326 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 TAC3Q9UHF0 121 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 ACTL7AQ9Y615 435 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 FAM230AA0A1W2PPH8 454 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 TSPAN11A1L157 253 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 SCDO00767 359 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 TYRP14679 529 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 HLA-FP30511 346 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 ARRB1P49407 418 aaPredicted RBP9.89□□□□□ -0.83
VCL-201ENST00000211998 FOXA1P55317 472 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 ZXDBP98169 803 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 CDC20Q12834 499 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 PPA1Q15181 289 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 TMEM41BQ5BJD5 291 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 H3F3CQ6NXT2 135 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 SLC51BQ86UW2 128 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 PLA2G15Q8NCC3 412 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 TFGQ92734 400 aaPredicted RBP9.89□□□□□ -0.83
VCL-201ENST00000211998 IRF7Q92985 503 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 TAAR8Q969N4 342 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 PNPLA2Q96AD5 504 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 NPY6RQ99463 290 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 POLDIP3Q9BY77 421 aaKnown RBP9.89□□□□□ -0.83
VCL-201ENST00000211998 GPRC5BQ9NZH0 403 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 CACNG4Q9UBN1 327 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 C19orf25Q9UFG5 118 aaPredicted RBP9.89□□□□□ -0.83
VCL-201ENST00000211998 IL20RAQ9UHF4 553 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 LMO7Q8WWI1 1683 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 MTMR11A4FU01 709 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 AKR7A2O43488 359 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 TCRBP04435 133 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 HSD3B2P26439 372 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 SELENOWP63302 87 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 ADAM5Q6NVV9 412 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 TMIGD1Q6UXZ0 262 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 LARP4Q71RC2 724 aaKnown RBP eCLIP9.89□□□□□ -0.83
VCL-201ENST00000211998 P4HA3Q7Z4N8 544 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 C12orf40Q86WS4 652 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 KLHL15Q96M94 604 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 ACKR4Q9NPB9 350 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 ALKBH4Q9NXW9 302 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 MYH6P13533 1939 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 GRXCR1A8MXD5 290 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 ACOT8O14734 319 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 CLDN7O95471 211 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 CAV2P51636 162 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 ZNF136P52737 540 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 IL13RA1P78552 427 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 MAP4K2Q12851 820 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 SLAMF1Q13291 335 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 SGCBQ16585 318 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 KANSL1Q7Z3B3 1105 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 BPHLQ86WA6 291 aaPredicted RBP9.89□□□□□ -0.83
VCL-201ENST00000211998 OSTM1Q86WC4 334 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 TMEM173Q86WV6 379 aaPredicted RBP9.89□□□□□ -0.83
VCL-201ENST00000211998 OR6V1Q8N148 313 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 DNAJC22Q8N4W6 341 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 OR2T11Q8NH01 316 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 PROKR1Q8TCW9 393 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 ZDHHC12Q96GR4 267 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 MSLNLQ96KJ4 702 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 TSGA13Q96PP4 275 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 UHRF1Q96T88 793 aaPredicted RBP9.89□□□□□ -0.83
VCL-201ENST00000211998 CRTAC1Q9NQ79 661 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 RXFP3Q9NSD7 469 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 STYXL1Q9Y6J8 313 aa9.89□□□□□ -0.83
VCL-201ENST00000211998 A0A0B4J2A0 478 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 CBY3A6NI87 242 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 ZNF736B4DX44 427 aaPredicted RBP9.88□□□□□ -0.83
VCL-201ENST00000211998 NPC1O15118 1278 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 LDB2O43679 373 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 KNG1P01042 644 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 PTHP01270 115 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 GAAP10253 952 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 NAT2P11245 290 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 FDXRP22570 491 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 HLA-DMAP28067 261 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 CDKN1CP49918 316 aaPredicted RBP9.88□□□□□ -0.83
VCL-201ENST00000211998 ERVPABLB-1P60509 514 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 AANATQ16613 207 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 DECR1Q16698 335 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 SYT6Q5T7P8 510 aaPredicted RBP9.88□□□□□ -0.83
VCL-201ENST00000211998 C3orf33Q6P1S2 294 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 OR5H2Q8NGV7 314 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 DUSP19Q8WTR2 217 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 SMPDL3BQ92485 455 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 C1orf74Q96LT6 269 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 SFXN2Q96NB2 322 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 FZD3Q9NPG1 666 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 MARCH4Q9P2E8 410 aaPredicted RBP9.88□□□□□ -0.83
VCL-201ENST00000211998 GMPR2Q9P2T1 348 aaKnown RBP9.88□□□□□ -0.83
VCL-201ENST00000211998 SHPKQ9UHJ6 478 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 PCTPQ9UKL6 214 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 OARD1Q9Y530 152 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 ZNF850A8MQ14 1090 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 ANHXE9PGG2 379 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 ANKRD28O15084 1053 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 SOCS5O75159 536 aa9.88□□□□□ -0.83
VCL-201ENST00000211998 PLGP00747 810 aaPredicted RBP9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms