RNA–Protein interactions for RNA: ENST00000003912.7

NIPAL3-201, Transcript of NIPA like domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene NIPAL3, Length 5,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-201ENST00000003912 NPIPA7E9PJI5 369 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 YY2O15391 372 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 NPIPA8P0DM63 369 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 CSNK1G2P78368 415 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 RNF220Q5VTB9 566 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 ACBD7Q8N6N7 88 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 ZNF548Q8NEK5 533 aaPredicted RBP9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 NARS2Q96I59 477 aaKnown RBP9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 MSLNLQ96KJ4 702 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 HDHD5Q9BXW7 423 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 MED28Q9H204 178 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 ATXN7L1Q9ULK2 861 aaPredicted RBP9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 SLC5A10A0PJK1 596 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 ORC5O43913 435 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 CDRT1O95170 752 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 APLNRP35414 380 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 PPP2CBP62714 309 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 PPP2CAP67775 309 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 ZNF423Q2M1K9 1284 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 SBSNQ6UWP8 590 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 ZADH2Q8N4Q0 377 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 OR1J4Q8NGS1 313 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 RNF6Q9Y252 685 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 LY75O60449 1722 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 CTNSO60931 367 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 MTRF1O75570 445 aaKnown RBP9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 OSMP13725 252 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 CELP19835 753 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 HOXC8P31273 242 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 CDKN2CP42773 168 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 EEF1A1P68104 462 aaKnown RBP9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 HTR4Q13639 388 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 BLMHQ13867 455 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 GPR19Q15760 415 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 HSD17B12Q53GQ0 312 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 BPHLQ86WA6 291 aaPredicted RBP9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 HTRA1Q92743 480 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 OR4K3Q96R72 315 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 SLC30A3Q99726 388 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 PRRX2Q99811 253 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 P2RY12Q9H244 342 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 THSD1Q9NS62 852 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 MUTYHQ9UIF7 546 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 ZBTB32Q9Y2Y4 487 aaPredicted RBP9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 RNF215Q9Y6U7 377 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 hCG_1807616A0A1W2PRN6 198 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 CENPBD1B2RD01 187 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 SNAP29O95721 258 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 RLN2P04090 185 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 PIGGQ5H8A4 983 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 SPIN3Q5JUX0 258 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 PIP5KL1Q5T9C9 394 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 XKR5Q6UX68 686 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 RAB11FIP2Q7L804 512 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 OR8S1Q8NH09 359 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 PRRC1Q96M27 445 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 SLC46A1Q96NT5 459 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 NT5DC2Q9H857 520 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 PCDHGA7Q9Y5G6 932 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 HSPE1-MOB4S4R3N1 261 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 OR7A17O14581 309 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 ALOX12BO75342 701 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 HRGP04196 525 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 SLC35E2P0CK97 266 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 PYCR1P32322 319 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 CSNK1A1P48729 337 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 PIN1Q13526 163 aaPredicted RBP9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 MICAQ29983 383 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 ARHGAP22Q7Z5H3 698 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 IQCF2Q8IXL9 164 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 OR7G1Q8NGA0 311 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 OR8K3Q8NH51 312 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 MUS81Q96NY9 551 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 IP6K3Q96PC2 410 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 DPH1Q9BZG8 443 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 NKX1-2Q9UD57 310 aaPredicted RBP9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 SH3BGRL2Q9UJC5 107 aa9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 ZNF443Q9Y2A4 671 aaPredicted RBP9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 MRPS2Q9Y399 296 aaKnown RBP9.72□□□□□ -0.85
NIPAL3-201ENST00000003912 EVPLQ92817 2033 aa9.71□□□□□ -0.85
NIPAL3-201ENST00000003912 CBFA2T3O75081 653 aa9.71□□□□□ -0.85
NIPAL3-201ENST00000003912 RAD51DO75771 328 aa9.71□□□□□ -0.85
NIPAL3-201ENST00000003912 PPP1R3DO95685 299 aa9.71□□□□□ -0.85
NIPAL3-201ENST00000003912 GKN3PP0CG01 181 aa9.71□□□□□ -0.85
NIPAL3-201ENST00000003912 THBS2P35442 1172 aa9.71□□□□□ -0.85
NIPAL3-201ENST00000003912 BCL2L15Q5TBC7 163 aa9.71□□□□□ -0.85
NIPAL3-201ENST00000003912 TSSK4Q6SA08 328 aa9.71□□□□□ -0.85
NIPAL3-201ENST00000003912 ZNF782Q6ZMW2 699 aaPredicted RBP9.71□□□□□ -0.85
NIPAL3-201ENST00000003912 NLRP8Q86W28 1048 aa9.71□□□□□ -0.85
NIPAL3-201ENST00000003912 MMP21Q8N119 569 aa9.71□□□□□ -0.85
NIPAL3-201ENST00000003912 RNF175Q8N4F7 328 aa9.71□□□□□ -0.85
NIPAL3-201ENST00000003912 LILRA3Q8N6C8 439 aaPredicted RBP9.71□□□□□ -0.85
NIPAL3-201ENST00000003912 CNEP1R1Q8N9A8 125 aa9.71□□□□□ -0.85
NIPAL3-201ENST00000003912 GALNT6Q8NCL4 622 aa9.71□□□□□ -0.85
NIPAL3-201ENST00000003912 WDR83Q9BRX9 315 aaKnown RBP9.71□□□□□ -0.85
NIPAL3-201ENST00000003912 URM1Q9BTM9 101 aaKnown RBP9.71□□□□□ -0.85
NIPAL3-201ENST00000003912 OR10A5Q9H207 317 aa9.71□□□□□ -0.85
NIPAL3-201ENST00000003912 LRRN3Q9H3W5 708 aa9.71□□□□□ -0.85
NIPAL3-201ENST00000003912 VAPAQ9P0L0 249 aa9.71□□□□□ -0.85
NIPAL3-201ENST00000003912 XIRP1Q702N8 1843 aaKnown RBP9.71□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms