RNA–Protein interactions for RNA: ENSMUST00000080860.12

Ccdc28a-202, Transcript of Coiled-coil domain-containing 28A, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc28a, Length 1,190 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc28a-202ENSMUST00000080860 Ncbp2Q9CQ49 156 aaKnown RBP11.12□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Tomm34Q9CYG7 309 aa11.12□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 NarfQ9CYQ7 462 aa11.12□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 CsQ9CZU6 464 aaKnown RBP11.12□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Tmem114Q9D563 222 aa11.12□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Tmem81Q9D5K1 259 aa11.12□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Asb12Q9D738 308 aa11.12□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Hm13Q9D8V0 378 aa11.12□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Med27Q9DB40 311 aa11.12□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Syvn1Q9DBY1 612 aa11.12□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Tuba8Q9JJZ2 449 aa11.12□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Prok2Q9QXU7 128 aa11.12□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 SpastQ9QYY8 614 aa11.12□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 PodxlQ9R0M4 503 aa11.12□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 RttnQ8R4Y8 2226 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 A0A1L1SR50 188 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Slc25a53A2AF28 346 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Vmn1r2A2AMT6 306 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Otud4B2RRE7 1107 aaKnown RBP11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Kpna7C0LLJ0 499 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Gm498D3YYH9 372 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Crisp4E9PVG4 293 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 4931429L15RikE9PVU2 379 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Vmn2r18E9Q280 788 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Gm3020E9Q3J7 150 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Zfp108E9Q8I5 642 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Gm42421F6X8D5 166 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Gm6576F6YTZ4 274 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Gm4141K9J7H2 306 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Vmn1r31L7N2F1 303 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Folh1O35409 752 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Cyp2j6O54750 501 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Csf1P07141 552 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 RbpjP31266 526 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Hcrtr2P58308 460 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Gpr85P60894 370 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 RykQ01887 594 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Btg2Q04211 158 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Atp8b1Q148W0 1251 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Glt6d1Q2NKH9 311 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Nxpe2Q3U095 558 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Gm45902Q3UDN3 361 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 C1rlQ3UZ09 482 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 PnocQ64387 187 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Pfkfb4Q6DTY7 469 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Lix1Q6P566 282 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Serpina12Q7TMF5 413 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Vac14Q80WQ2 782 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Nup107Q8BH74 926 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Rell2Q8BRJ3 303 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 UstQ8BUB6 407 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Bhlhe22Q8C6A8 355 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Yod1Q8CB27 343 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Sdr9c7Q8K3P0 313 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Trib1Q8K4K4 372 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Cgref1Q8R1U2 281 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Ocel1Q8VCR9 219 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Olfr986Q8VFN6 312 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Olfr340Q8VGL0 312 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 S1pr5Q91X56 400 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Prl7c1Q9CRB5 251 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Hipk3Q9ERH7 1192 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Thsd1Q9JM61 851 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Frem1Q684R7 2191 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 FlncQ8VHX6 2726 aaKnown RBP11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Pcnx3Q8VI59 2028 aa11.11□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Cd300ld2A2A7W0 305 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Cd300ld4A2A7W1 245 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Zfp993A2A8V4 313 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Gm15128A2ADW8 449 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Sdccag3A2AIW0 432 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Olfr1206A2ATJ9 307 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Gpr155A2AWR3 868 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Gm15093A2BI72 449 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Zfp992B1ASD8 573 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Luzp4B1AV09 449 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Gm15127B1AVZ5 449 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Gm15107B1B0X0 449 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Gm15097E9QA14 449 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Slc16a5G5E8K6 468 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Gm21897J3KMP5 500 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Vmn2r28L7N203 852 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 KeraO35367 351 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Aif1O70200 147 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Tp63O88898 680 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 IghmP01872 454 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Gstm3P19639 218 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 LhcgrP30730 700 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Ppm1bP36993 390 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 RorcP51450 516 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Cdkn2bP55271 130 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Hpcal1P62748 193 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 RptnP97347 1118 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Vipr1P97751 459 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 VegfdP97946 358 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Cass4Q08EC4 804 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Agbl4Q09LZ8 540 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Zc3hav1Q3UPF5 946 aaKnown RBP11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Gm3558Q5FWC9 205 aa11.1□□□□□ -0.63
Ccdc28a-202ENSMUST00000080860 Abcb7Q61102 752 aaKnown RBP11.1□□□□□ -0.63
Retrieved 100 of 22,080 RNA–protein pairs in 48.7 ms