RNA–Protein interactions for RNA: ENSMUST00000054384.5

Trim56-201, Transcript of E3 ubiquitin-protein ligase TRIM56, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim56, Length 9,279 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim56-201ENSMUST00000054384 Arl5bQ9D4P0 179 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Slc6a14Q9JMA9 638 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Nhsl2B1AXH1 854 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Gml2G5E8L7 176 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Cfap97Q6ZPR1 541 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 SynbQ8BI41 618 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 D8Ertd738eQ8R1F0 94 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Pla2g15Q8VEB4 412 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Mthfd1Q922D8 935 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Cdrt4Q9DA64 179 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 D7h11orf16Q9JJR6 402 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Ndrg2Q9QYG0 371 aaKnown RBP11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Mtm1Q9Z2C5 603 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 D430041D05RikF6ZGR6 1678 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Olfr634-ps1A0A1B0GRN7 318 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 BC035947B2RQY6 695 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Eci1P42125 289 aaKnown RBP11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Vipr1P97751 459 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Klhl9Q6ZPT1 617 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Olfr514Q8VFZ6 310 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Cd209dQ91ZW8 237 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Clstn3Q99JH7 956 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Glo1Q9CPU0 184 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Acp4D3YTS9 425 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Zfp989H3BLB0 661 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Tssk2O54863 358 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Fcn1O70165 334 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 ArhgdigQ62160 225 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Paqr3Q6TCG8 311 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Unc119bQ8C4B4 251 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Ceacam20Q9D2Z1 577 aa11.37□□□□□ -0.59
Trim56-201ENSMUST00000054384 Olfr1130A0A1L1SQT2 314 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 A0A286YCD0 109 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Olfr1129A2AV41 314 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Gm12800B1AUV4 484 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 NelfeP19426 375 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Pabpc2Q62029 628 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Kansl1Q80TG1 1036 aaKnown RBP11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Slc38a2Q8CFE6 504 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Eef1akmt1Q9CY45 214 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Ndufv2Q9D6J6 248 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Slco1c1Q9ERB5 715 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Pdzk1Q9JIL4 519 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Alyref2Q9JJW6 218 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Cdc34bA0A140T8I4 237 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Sec24aQ3U2P1 1090 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Q3USZ8 430 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Shc4Q6S5L9 626 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Olfr799Q8VGI7 311 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Hrh4Q91ZY2 391 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Olfr948Q9EQ95 321 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Slc35a2Q9R0M8 390 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Rpl13a-ps1A0A140T8K2 203 aaKnown RBP11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Zfp993A2A8V4 313 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Olfr893K7N678 312 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Gm8024L7N2E0 100 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 JunbP09450 344 aaKnown RBP11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Ubfd1Q78JW9 368 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Mppe1Q80XL7 396 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Pcyt1bQ811Q9 369 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 B3gnt5Q8BGY6 376 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Peli3Q8BXR6 445 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Q8K207 121 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Traf3ip2Q8N7N6 555 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Olfr48Q8VGN4 301 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Dnajc18Q9CZJ9 357 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Bex3Q9WTZ9 124 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 A26c2A0A140LHE4 291 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Vmn2r91E9Q2U5 856 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Gp6P0C191 313 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Pou2f1P25425 770 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Dsc3P55850 896 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Hephl1Q3V1H3 1159 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Gpr17Q6NS65 339 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Prss43Q76HL1 382 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 GnsQ8BFR4 544 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Zfp3Q8BLB0 497 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Olfr1141Q8VFQ7 311 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Mgme1Q9CXC3 338 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Slc15a1Q9JIP7 709 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Hoxa9P09631 271 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Thsd4Q3UTY6 1018 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 PtprrQ62132 656 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Olfr834Q7TRG8 312 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Olfr1217Q8VGG1 304 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Dennd2dQ91VV4 469 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 NlkO54949 527 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Cacng2O88602 323 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Cntn1P12960 1020 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 PitpnbP53811 271 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Nup43P59235 380 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Fezf1Q0VDQ9 475 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 NnatQ61979 81 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Olfr524Q7TRU0 318 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Chil6Q80W26 440 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Leng9Q8BTN6 485 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Q8CF31 99 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Sirt3Q8R104 334 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Pttg1ipQ8R143 174 aa11.36□□□□□ -0.59
Trim56-201ENSMUST00000054384 Mrgprb3Q91ZC1 312 aa11.36□□□□□ -0.59
Retrieved 100 of 22,080 RNA–protein pairs in 95 ms