RNA–Protein interactions for RNA: ENSMUST00000035935.8

Ccdc40-201, Transcript of Coiled-coil domain-containing protein 40, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ccdc40, Length 4,979 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc40-201ENSMUST00000035935 P01645 108 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 P01646 108 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 P01647 108 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Gpr3P35413 330 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Etv2P41163 335 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 GcgP55095 180 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Gm1123Q1RME4 390 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Gm45902Q3UDN3 361 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Nup62Q63850 526 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 BpiQ67E05 483 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Tas2r3Q7TQA7 316 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Rxfp3Q8BGE9 472 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Ntmt1Q8R2U4 223 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Olfr551Q8VG23 315 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Cacng6Q8VHW3 260 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Elovl6Q920L5 267 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Ufsp2Q99K23 461 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Serpinb7Q9D695 380 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Trpv4Q9EPK8 871 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Mbd2Q9Z2E1 414 aa9.75□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Cldn4O35054 210 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Cdc25bP30306 576 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Slc6a11P31650 627 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 TsxP70675 144 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 SgcdP82347 289 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Slc5a6Q5U4D8 634 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Mapk3Q63844 380 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Grm7Q68ED2 915 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Mfsd4aQ6PDC8 510 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Cldn34b3Q80ZS5 209 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Slc7a6Q8BGK6 515 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Nrip1Q8CBD1 1161 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Nmral1Q8K2T1 309 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Olfr952Q8VFD7 314 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Tex46Q9CPU3 165 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Tmem53Q9D0Z3 276 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Ccdc167Q9D162 97 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Olfr955Q9EQ97 314 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Olfr930Q9EQ99 308 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Chrnb2Q9ERK7 501 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Zfp383A0A087WRR7 490 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Gm13285B1AYI3 182 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Gm13275B1AYI8 182 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Dlgap4B1AZP2 992 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 PtprhE9Q0N2 971 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Aff2O55112 1272 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 P01673 111 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 RoraP51448 523 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Ppp5cQ60676 499 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Cbx5Q61686 191 aaKnown RBP9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Olfr1275Q7TQY8 312 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 IfnzQ8BQT1 182 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Gm13278Q8CD73 182 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Rpl14Q9CR57 217 aaKnown RBP9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Tssk4Q9D411 328 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Q9DAD0 168 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Plscr2Q9DCW2 307 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Clca3a2Q9EQR4 902 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Olig2Q9EQW6 323 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Gm16432A0A0A6YXX9 775 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 KantrA0A1W2P7I0 76 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Gm10715J3QP74 227 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Gm8857L7N291 182 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Cx3cl1O35188 395 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Cyp17a1P27786 507 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Sorbs2Q3UTJ2 1180 aaKnown RBP9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 C130050O18RikQ497Y9 356 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Hsf5Q5ND04 624 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Kat7Q5SVQ0 613 aaKnown RBP9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Pon3Q62087 354 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Taf6Q62311 678 aaKnown RBP9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Fbxo42Q6PDJ6 717 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 C8bQ8BH35 589 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Kctd11Q8K485 232 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Foxe1Q8R2I0 371 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Fam110cQ8VE94 421 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Olfr450Q8VF81 310 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Olfr849Q8VFF6 312 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 2410137M14RikQ9CWF0 162 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Q9D1Z2 194 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Ift43Q9DA69 206 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Znrf4Q9DAH2 327 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Gpr88Q9EPB7 384 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Snap29Q9ERB0 260 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Rab25Q9WTL2 213 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 A0A286YDM2 672 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Scgb2b3D2XZ38 112 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Prps1l3G3UXL2 318 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Olfr1249L7MU51 318 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Hmga1P17095 107 aaKnown RBP9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Kcne1P23299 129 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 SobpQ0P5V2 864 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Q3KQP7 184 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Guk1Q64520 198 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Med26Q7TN02 588 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Mettl2Q8BMK1 389 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Rab43Q8CG50 210 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Olfr569Q8VGZ2 314 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Hint3Q9CPS6 165 aa9.74□□□□□ -0.85
Ccdc40-201ENSMUST00000035935 Prps1Q9D7G0 318 aa9.74□□□□□ -0.85
Retrieved 100 of 22,080 RNA–protein pairs in 34.1 ms