RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Ccdc3Q9D6Y1 273 aa12.64□□□□□ -0.39
Nup88-201ENSMUST00000035283 HaghlQ9DB32 283 aa12.64□□□□□ -0.39
Nup88-201ENSMUST00000035283 Ndrg3Q9QYF9 375 aa12.64□□□□□ -0.39
Nup88-201ENSMUST00000035283 Khdrbs2Q9WU01 349 aa12.64□□□□□ -0.39
Nup88-201ENSMUST00000035283 Gm13178B1AVU7 408 aa12.64□□□□□ -0.39
Nup88-201ENSMUST00000035283 Gm7951E9Q0A2 213 aa12.64□□□□□ -0.39
Nup88-201ENSMUST00000035283 Gm7275E9Q1B3 247 aa12.64□□□□□ -0.39
Nup88-201ENSMUST00000035283 Zfp277E9Q6D6 583 aaKnown RBP12.64□□□□□ -0.39
Nup88-201ENSMUST00000035283 Gm6482F6YHC1 213 aa12.64□□□□□ -0.39
Nup88-201ENSMUST00000035283 Gm17124F6ZIG1 213 aa12.64□□□□□ -0.39
Nup88-201ENSMUST00000035283 H2-T24F8VQG4 363 aa12.64□□□□□ -0.39
Nup88-201ENSMUST00000035283 Vmn2r111K7N674 857 aa12.64□□□□□ -0.39
Nup88-201ENSMUST00000035283 Cdk5r2O35926 369 aa12.64□□□□□ -0.39
Nup88-201ENSMUST00000035283 Mab21l1O70299 359 aa12.64□□□□□ -0.39
Nup88-201ENSMUST00000035283 Mtx2O88441 263 aa12.64□□□□□ -0.39
Nup88-201ENSMUST00000035283 CgaP01216 120 aa12.64□□□□□ -0.39
Nup88-201ENSMUST00000035283 Gabrb1P50571 474 aa12.64□□□□□ -0.39
Nup88-201ENSMUST00000035283 Thbs2Q03350 1172 aa12.64□□□□□ -0.39
Nup88-201ENSMUST00000035283 Defb23Q30KP0 166 aa12.64□□□□□ -0.39
Nup88-201ENSMUST00000035283 Tamm41Q3TUH1 337 aa12.64□□□□□ -0.39
Nup88-201ENSMUST00000035283 Sec24aQ3U2P1 1090 aa12.64□□□□□ -0.39
Nup88-201ENSMUST00000035283 Gtpbp2Q3UJK4 602 aa12.64□□□□□ -0.39
Nup88-201ENSMUST00000035283 B3gnt6Q3USF0 391 aa12.64□□□□□ -0.39
Nup88-201ENSMUST00000035283 Taar2Q5QD17 339 aa12.64□□□□□ -0.39
Nup88-201ENSMUST00000035283 GkQ64516 559 aa12.64□□□□□ -0.39
Nup88-201ENSMUST00000035283 SnupnQ80W37 358 aa12.64□□□□□ -0.39
Nup88-201ENSMUST00000035283 Kxd1Q80XH1 177 aa12.64□□□□□ -0.39
Nup88-201ENSMUST00000035283 Slc5a7Q8BGY9 580 aa12.64□□□□□ -0.39
Nup88-201ENSMUST00000035283 1700029P11RikQ9CQ68 150 aa12.64□□□□□ -0.39
Nup88-201ENSMUST00000035283 Wdr45bQ9CR39 344 aa12.64□□□□□ -0.39
Nup88-201ENSMUST00000035283 Cers5Q9D6K9 414 aa12.64□□□□□ -0.39
Nup88-201ENSMUST00000035283 Chp2Q9D869 196 aa12.64□□□□□ -0.39
Nup88-201ENSMUST00000035283 Plxna2P70207 1894 aa12.64□□□□□ -0.39
Nup88-201ENSMUST00000035283 Eml5Q8BQM8 1977 aa12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 Igkv4-86A0A0G2JGE7 114 aa12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 Cd300cA2A7V7 229 aa12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 Cela3aA2A9U8 283 aa12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 Ppp1r3dA2AJW4 279 aa12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 Nxpe3B9EKK6 559 aa12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 Vmn2r117K7N6V1 857 aa12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 Dsc1P55849 886 aa12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 Dtx3lQ3UIR3 748 aa12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 PcnpQ6P8I4 178 aaKnown RBP12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 Olfr765Q7TRI6 309 aa12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 Acsm4Q80W40 580 aa12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 Gm10330Q8BKS1 112 aa12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 C130079G13RikQ8BUY2 280 aa12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 Lypd4Q8BVP6 246 aa12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 Irf2bplQ8K3X4 775 aa12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 Zfp709Q8VC29 727 aa12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 Noxo1Q8VCM2 349 aa12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 Olfr767Q8VG33 309 aa12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 Zfand2bQ91X58 257 aa12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 Asf1aQ9CQE6 204 aa12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 CenpnQ9CZW2 337 aa12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 Cndp2Q9D1A2 475 aaKnown RBP12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 Dpysl5Q9EQF6 564 aa12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 1700025B11RikA0A087WNZ6 93 aa12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 Slc37a4A0A1L1SUI3 450 aa12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 Skint4A7TZF3 474 aa12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 Gm1330D3Z460 184 aa12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 Zfp141G3UY09 685 aa12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 P01648 108 aa12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 TrhrP21761 393 aa12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 Cd63P41731 238 aa12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 Cdh10P70408 788 aa12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 Trappc13Q3TIR1 417 aa12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 BC030870Q3V2G4 71 aa12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 ScocQ78YZ6 125 aa12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 Marveld1Q7TQJ1 173 aa12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 Slitrk4Q810B8 837 aa12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 Zcchc3Q8BPK2 400 aaKnown RBP12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 Yipf4Q8C407 246 aa12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 Zfpm2Q8CCH7 1151 aa12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 TmieQ8K467 153 aa12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 Hbp1Q8R316 516 aa12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 Zfyve21Q8VCM3 234 aa12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 Olfr53Q8VGL8 312 aa12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 Gorasp2Q99JX3 451 aa12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 Slc10a6Q9CXB2 373 aa12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 Plscr3Q9JIZ9 296 aa12.63□□□□□ -0.39
Nup88-201ENSMUST00000035283 IghdA0A0A6YW14 291 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Olfr1315-ps1A0A140LI66 314 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 CatsperbA2RTF1 1109 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Cd101A8E0Y8 1033 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Gm20547B8JJN0 1276 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Gpr31F8VQN3 319 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Galnt9G3X942 604 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Zfp619G3X9T2 1161 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Scarb2O35114 478 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Rnf13O54965 381 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Smpd2O70572 419 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 CfbP04186 761 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Slc7a2P18581 657 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 CatP24270 527 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 CremP27699 357 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 IgfalsP70389 603 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Tgm3Q08189 693 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Fads2p1Q0VAX3 487 aa12.62□□□□□ -0.39
Nup88-201ENSMUST00000035283 Entpd6Q3U0P5 455 aa12.62□□□□□ -0.39
Retrieved 100 of 22,080 RNA–protein pairs in 54.4 ms