RNA–Protein interactions for RNA: ENSMUST00000007584.3

Pcdhac1-201, Transcript of Protocadherin alpha C1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcdhac1, Length 5,419 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhac1-201ENSMUST00000007584 Tmem239Q9DA47 151 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 1700001F09RikQ9DAR5 184 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Mkrn2Q9ERV1 416 aaKnown RBP11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 D7h11orf16Q9JJR6 402 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Rad9aQ9Z0F6 389 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Mpeg1A1L314 713 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Zfp69A2A761 587 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Vmn2r82G3UWA2 865 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Rhox2hK7N6P1 191 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Vmn2r117K7N6V1 857 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Adamts19P59509 1210 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Lhx1P63006 406 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Sppl2bQ3TD49 578 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Nt5c3bQ3UFY7 300 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Slc5a6Q5U4D8 634 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Olfr1051Q7TR76 308 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Lrrc15Q80X72 579 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Irf2bplQ8K3X4 775 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Olfr53Q8VGL8 312 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Ubap2Q91VX2 1132 aaKnown RBP11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Slc35b2Q91ZN5 431 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 HaghQ99KB8 309 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Arl2Q9D0J4 184 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Mfsd1Q9DC37 464 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Pex14Q9R0A0 376 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Gm45716A0A1B0GRQ0 93 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Olfr1056A2AVY0 313 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Skint2A7XUX6 400 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 BatfO35284 125 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 GcP21614 476 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Rps24P62849 133 aaKnown RBP11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 GaltQ03249 379 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Cnn2Q08093 305 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Hif3aQ0VBL6 662 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Q3UY34 256 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Cd300lfQ6SJQ7 337 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Paqr6Q6TCG5 343 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Klhl9Q6ZPT1 617 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Olfr109Q8VG96 314 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Gmpr2Q99L27 348 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Nkx6-1Q99MA9 365 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Mettl18Q9CZ09 362 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Naalad2Q9CZR2 740 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Borcs8Q9D6Y4 120 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Rcan2Q9JHG2 197 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 RangrfQ9JIB0 185 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Cdc20Q9JJ66 499 aa11.65□□□□□ -0.54
Pcdhac1-201ENSMUST00000007584 Zfp982A2A8Q4 368 aa11.65□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 Gm8159E9Q0R1 267 aa11.65□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 HckP08103 524 aa11.65□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 Hoxc6P10629 235 aa11.65□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 Pin1rt1Q3ULQ2 159 aa11.65□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 Mef2aQ60929 498 aa11.65□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 Wasf3Q8VHI6 501 aa11.65□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 NoboxQ8VIH1 527 aa11.65□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 Olfr701Q9D3U9 316 aa11.65□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 Dgat2Q9DCV3 388 aa11.65□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 PlpbpQ9Z2Y8 274 aa11.65□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 Dnmt1P13864 1620 aaKnown RBP11.64□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 Gm597E9Q8J5 896 aa11.64□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 Olfr190K7N5T5 307 aa11.64□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 Fcer1aP20489 250 aa11.64□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 Stfa1P35175 97 aa11.64□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 Clec3bP43025 202 aa11.64□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 Sox1P53783 391 aa11.64□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 Cdkn2bP55271 130 aa11.64□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 Fabp5Q05816 135 aaKnown RBP11.64□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 Ccdc190Q3URK1 288 aa11.64□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 Tmem199Q5SYH2 208 aa11.64□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 WdcpQ6NV72 663 aa11.64□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 Mrps10Q80ZK0 160 aaKnown RBP11.64□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 Acp6Q8BP40 418 aa11.64□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 Bcas3Q8CCN5 928 aa11.64□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 Tmem125Q8CHQ6 216 aa11.64□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 Vmn1r201Q8R262 300 aa11.64□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 Cd276Q8VE98 316 aa11.64□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 Olfr1141Q8VFQ7 311 aa11.64□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 Olfr514Q8VFZ6 310 aa11.64□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 Olfr283Q8VGU2 309 aa11.64□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 Odf4Q8VI88 290 aa11.64□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 Thumpd1Q99J36 350 aaKnown RBP11.64□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 Elp5Q99L85 300 aa11.64□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 Etv5Q9CXC9 510 aa11.64□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 Ephx1Q9D379 455 aa11.64□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 Pkmyt1Q9ESG9 490 aa11.64□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 Gm21876F6XK35 94 aa11.64□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 Kcns2O35174 477 aa11.64□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 Matn3O35701 481 aa11.64□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 Il1bP10749 269 aa11.64□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 Tmem104Q3TB48 496 aa11.64□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 Fam117bQ3U3E2 584 aa11.64□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 EndouQ3V188 412 aa11.64□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 Brinp3Q499E0 766 aa11.64□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 UnklQ5FWH2 727 aaKnown RBP11.64□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 Il10raQ61727 575 aa11.64□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 Olfr787Q7TRI1 312 aa11.64□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 Entpd3Q8BFW6 529 aa11.64□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 Rell1Q8K2J7 272 aa11.64□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 OscarQ8VBT3 265 aa11.64□□□□□ -0.55
Pcdhac1-201ENSMUST00000007584 Olfr347Q8VGK2 312 aa11.64□□□□□ -0.55
Retrieved 100 of 22,080 RNA–protein pairs in 39.5 ms