RNA–Protein interactions for RNA: ENSMUST00000005705.7

Trim28-201, Transcript of Transcription intermediary factor 1-beta, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim28, Length 3,245 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim28-201ENSMUST00000005705 Olfr705Q9EPF7 316 aa15.27■□□□□ 0.03
Trim28-201ENSMUST00000005705 Znf207Q9JMD0 495 aaKnown RBP15.27■□□□□ 0.03
Trim28-201ENSMUST00000005705 Xlr5aA2BI45 236 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Gm21904A8HG57 180 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Gm21319F6YNI8 144 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Gm21866J3QMH4 180 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 C1dO35473 141 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Ltb4rO88855 351 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 CyctP00015 105 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 BckdhaP50136 442 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Gm11492Q5ND19 536 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Epha1Q60750 977 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 ParpbpQ6IRT3 573 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Krba1Q6NXZ1 1043 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Q6P1I3 445 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Ppp2r1bQ7TNP2 601 aaKnown RBP15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 4933430I17RikQ8BHW4 495 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Q8C0X8 640 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Cpn2Q9DBB9 547 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Tbl2Q9R099 442 aaKnown RBP15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 MylkQ6PDN3 1941 aaKnown RBP15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Cd163l1A0A1B0GSB0 991 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Zfp54E9PW05 585 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Lsm2O35900 95 aaKnown RBP15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Cntn1P12960 1020 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Taf1aP97357 453 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Hif3aQ0VBL6 662 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Crtc2Q3U182 692 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 MeikinQ5F2C3 434 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Olfr699Q7TRN3 316 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Kctd20Q8CDD8 419 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Erlec1Q8VEH8 483 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Acot7Q91V12 381 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Tram2Q924Z5 370 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Ssr2Q9CPW5 183 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Exo5Q9CXP9 373 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Q9DAR0 182 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Akr1a1Q9JII6 325 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Sppl2aQ9JJF9 523 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Gmeb1Q9JL60 562 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Rex2A2AWF2 685 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Gm6619F6URP1 175 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Sox9Q04887 507 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Defb43Q30KM9 69 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Taar2Q5QD17 339 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Nt5eQ61503 576 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Eid2Q6X7S9 236 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Eri3Q8C460 337 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Dhcr24Q8VCH6 516 aaKnown RBP15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Plet1Q8VEN2 237 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Olfr1391Q8VFA4 311 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Tmem168Q91VX9 697 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Ift46Q9DB07 301 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Sphk2Q9JIA7 617 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Cyp2d22Q9JKY7 500 aa15.26■□□□□ 0.03
Trim28-201ENSMUST00000005705 Ajap1A2ALI5 412 aa15.25■□□□□ 0.03
Trim28-201ENSMUST00000005705 Olfr172E9Q8F6 309 aa15.25■□□□□ 0.03
Trim28-201ENSMUST00000005705 Vmn1r13G5E8I3 300 aa15.25■□□□□ 0.03
Trim28-201ENSMUST00000005705 Ulk1O70405 1051 aa15.25■□□□□ 0.03
Trim28-201ENSMUST00000005705 P03987 398 aa15.25■□□□□ 0.03
Trim28-201ENSMUST00000005705 Adh5P28474 374 aa15.25■□□□□ 0.03
Trim28-201ENSMUST00000005705 Apoc2Q05020 97 aa15.25■□□□□ 0.03
Trim28-201ENSMUST00000005705 Mtmr11Q3V1L6 700 aa15.25■□□□□ 0.03
Trim28-201ENSMUST00000005705 Rims3Q80U57 307 aa15.25■□□□□ 0.03
Trim28-201ENSMUST00000005705 Kxd1Q80XH1 177 aa15.25■□□□□ 0.03
Trim28-201ENSMUST00000005705 C8bQ8BH35 589 aa15.25■□□□□ 0.03
Trim28-201ENSMUST00000005705 Fam46bQ8C152 427 aa15.25■□□□□ 0.03
Trim28-201ENSMUST00000005705 Lrch4Q921G6 680 aa15.25■□□□□ 0.03
Trim28-201ENSMUST00000005705 Pcyt2Q922E4 404 aa15.25■□□□□ 0.03
Trim28-201ENSMUST00000005705 Glyr1Q922P9 546 aaKnown RBP15.25■□□□□ 0.03
Trim28-201ENSMUST00000005705 Trmt5Q9D0C4 501 aa15.25■□□□□ 0.03
Trim28-201ENSMUST00000005705 Trappc4Q9ES56 219 aa15.25■□□□□ 0.03
Trim28-201ENSMUST00000005705 Pole3Q9JKP7 145 aa15.25■□□□□ 0.03
Trim28-201ENSMUST00000005705 Eml5Q8BQM8 1977 aa15.25■□□□□ 0.03
Trim28-201ENSMUST00000005705 Olfr1188A2AV10 312 aa15.25■□□□□ 0.03
Trim28-201ENSMUST00000005705 Gm3755K7N743 167 aa15.25■□□□□ 0.03
Trim28-201ENSMUST00000005705 OtpO09113 325 aa15.25■□□□□ 0.03
Trim28-201ENSMUST00000005705 Cdk1P11440 297 aa15.25■□□□□ 0.03
Trim28-201ENSMUST00000005705 Fmo1P50285 532 aa15.25■□□□□ 0.03
Trim28-201ENSMUST00000005705 Upp1P52624 311 aa15.25■□□□□ 0.03
Trim28-201ENSMUST00000005705 Rps7P62082 194 aaKnown RBP15.25■□□□□ 0.03
Trim28-201ENSMUST00000005705 Tbx6P70327 436 aa15.25■□□□□ 0.03
Trim28-201ENSMUST00000005705 HgfQ08048 728 aa15.25■□□□□ 0.03
Trim28-201ENSMUST00000005705 Zc4h2Q68FG0 224 aa15.25■□□□□ 0.03
Trim28-201ENSMUST00000005705 Mapre3Q6PER3 281 aa15.25■□□□□ 0.03
Trim28-201ENSMUST00000005705 Galnt7Q80VA0 657 aa15.25■□□□□ 0.03
Trim28-201ENSMUST00000005705 Trmt61aQ80XC2 290 aa15.25■□□□□ 0.03
Trim28-201ENSMUST00000005705 Timm29Q8BGX2 266 aa15.25■□□□□ 0.03
Trim28-201ENSMUST00000005705 E330021D16RikQ8BW45 371 aa15.25■□□□□ 0.03
Trim28-201ENSMUST00000005705 Gm42417Q8K1D0 126 aa15.25■□□□□ 0.03
Trim28-201ENSMUST00000005705 Olfr633Q8VF02 312 aa15.25■□□□□ 0.03
Trim28-201ENSMUST00000005705 Chmp1b1Q99LU0 199 aa15.25■□□□□ 0.03
Trim28-201ENSMUST00000005705 Cmss1Q9CZT6 276 aaKnown RBP15.25■□□□□ 0.03
Trim28-201ENSMUST00000005705 Rtp4Q9ER80 249 aaKnown RBP15.25■□□□□ 0.03
Trim28-201ENSMUST00000005705 Ca7Q9ERQ8 264 aa15.25■□□□□ 0.03
Trim28-201ENSMUST00000005705 B3galt5Q9JI67 308 aa15.25■□□□□ 0.03
Trim28-201ENSMUST00000005705 Ighv6-6A0A075B5T3 119 aa15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 Sult2a3D3Z1W5 285 aa15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 Slc6a6O35316 621 aa15.24■□□□□ 0.03
Trim28-201ENSMUST00000005705 Pdlim1O70400 327 aa15.24■□□□□ 0.03
Retrieved 100 of 22,080 RNA–protein pairs in 29.3 ms