RNA–Protein interactions for RNA: ENST00000640482.1

VEGFA-230, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 1,065 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-230ENST00000640482 RNASE6Q93091 150 aaKnown RBP22.86■■□□□ 1.25
VEGFA-230ENST00000640482 RMND5BQ96G75 393 aaPredicted RBP22.86■■□□□ 1.25
VEGFA-230ENST00000640482 ZFP3Q96NJ6 502 aa22.86■■□□□ 1.25
VEGFA-230ENST00000640482 UCN2Q96RP3 112 aa22.86■■□□□ 1.25
VEGFA-230ENST00000640482 TM9SF2Q99805 663 aa22.86■■□□□ 1.25
VEGFA-230ENST00000640482 SH3GL2Q99962 352 aa22.86■■□□□ 1.25
VEGFA-230ENST00000640482 TBL1XR1Q9BZK7 514 aa22.86■■□□□ 1.25
VEGFA-230ENST00000640482 PTGES2Q9H7Z7 377 aa22.86■■□□□ 1.25
VEGFA-230ENST00000640482 ATP6V1HQ9UI12 483 aa22.86■■□□□ 1.25
VEGFA-230ENST00000640482 GXYLT2A0PJZ3 443 aa22.85■■□□□ 1.25
VEGFA-230ENST00000640482 SCAMP2O15127 329 aaKnown RBP22.85■■□□□ 1.25
VEGFA-230ENST00000640482 EMC8O43402 210 aa22.85■■□□□ 1.25
VEGFA-230ENST00000640482 SKAP2O75563 359 aaPredicted RBP22.85■■□□□ 1.25
VEGFA-230ENST00000640482 NKX2-2O95096 273 aa22.85■■□□□ 1.25
VEGFA-230ENST00000640482 ZWINTO95229 277 aa22.85■■□□□ 1.25
VEGFA-230ENST00000640482 UTS2O95399 124 aa22.85■■□□□ 1.25
VEGFA-230ENST00000640482 IL18BPO95998 194 aa22.85■■□□□ 1.25
VEGFA-230ENST00000640482 TMIGD3P0DMS9 266 aaPredicted RBP22.85■■□□□ 1.25
VEGFA-230ENST00000640482 TCEA1P23193 301 aaKnown RBP22.85■■□□□ 1.25
VEGFA-230ENST00000640482 STARP49675 285 aa22.85■■□□□ 1.25
VEGFA-230ENST00000640482 ZNF844Q08AG5 666 aa22.85■■□□□ 1.25
VEGFA-230ENST00000640482 MLC1Q15049 377 aa22.85■■□□□ 1.25
VEGFA-230ENST00000640482 POMZP3Q6PJE2 187 aa22.85■■□□□ 1.25
VEGFA-230ENST00000640482 ADGRE4PQ86SQ3 457 aa22.85■■□□□ 1.25
VEGFA-230ENST00000640482 CDH24Q86UP0 819 aa22.85■■□□□ 1.25
VEGFA-230ENST00000640482 TMEM200AQ86VY9 491 aa22.85■■□□□ 1.25
VEGFA-230ENST00000640482 FNDC5Q8NAU1 212 aa22.85■■□□□ 1.25
VEGFA-230ENST00000640482 OR6Y1Q8NGX8 325 aa22.85■■□□□ 1.25
VEGFA-230ENST00000640482 PIK3R3Q92569 461 aa22.85■■□□□ 1.25
VEGFA-230ENST00000640482 SLC9A6Q92581 669 aa22.85■■□□□ 1.25
VEGFA-230ENST00000640482 MED11Q9P086 117 aa22.85■■□□□ 1.25
VEGFA-230ENST00000640482 GIMAP2Q9UG22 337 aa22.85■■□□□ 1.25
VEGFA-230ENST00000640482 INTS1Q8N201 2190 aaKnown RBP22.84■■□□□ 1.25
VEGFA-230ENST00000640482 GIMAP1-GIMAP5A0A087WTJ2 511 aa22.84■■□□□ 1.25
VEGFA-230ENST00000640482 CLCA1A8K7I4 914 aa22.84■■□□□ 1.25
VEGFA-230ENST00000640482 C17orf51A8MQB3 221 aa22.84■■□□□ 1.25
VEGFA-230ENST00000640482 B4DXG7 233 aa22.84■■□□□ 1.25
VEGFA-230ENST00000640482 LYPLA1O75608 230 aaPredicted RBP22.84■■□□□ 1.25
VEGFA-230ENST00000640482 ZNF708P17019 499 aa22.84■■□□□ 1.25
VEGFA-230ENST00000640482 HK1P19367 917 aa22.84■■□□□ 1.25
VEGFA-230ENST00000640482 MAP3K8P41279 467 aa22.84■■□□□ 1.25
VEGFA-230ENST00000640482 KIR2DL3P43628 341 aa22.84■■□□□ 1.25
VEGFA-230ENST00000640482 SERPINB4P48594 390 aa22.84■■□□□ 1.25
VEGFA-230ENST00000640482 PRR5P85299 388 aa22.84■■□□□ 1.25
VEGFA-230ENST00000640482 BCL2A1Q16548 175 aa22.84■■□□□ 1.25
VEGFA-230ENST00000640482 ZCCHC12Q6PEW1 402 aa22.84■■□□□ 1.25
VEGFA-230ENST00000640482 MARCH3Q86UD3 253 aa22.84■■□□□ 1.25
VEGFA-230ENST00000640482 DUSP19Q8WTR2 217 aa22.84■■□□□ 1.25
VEGFA-230ENST00000640482 WNT2BQ93097 391 aa22.84■■□□□ 1.25
VEGFA-230ENST00000640482 GIMAP5Q96F15 307 aa22.84■■□□□ 1.25
VEGFA-230ENST00000640482 C3orf30Q96M34 536 aa22.84■■□□□ 1.25
VEGFA-230ENST00000640482 C1orf50Q9BV19 199 aa22.84■■□□□ 1.25
VEGFA-230ENST00000640482 HHATLQ9HCP6 504 aa22.84■■□□□ 1.25
VEGFA-230ENST00000640482 ATAD3AQ9NVI7 634 aa22.84■■□□□ 1.25
VEGFA-230ENST00000640482 PDZD2O15018 2839 aa22.83■■□□□ 1.25
VEGFA-230ENST00000640482 HSPA4LO95757 839 aa22.83■■□□□ 1.25
VEGFA-230ENST00000640482 PEPDP12955 493 aa22.83■■□□□ 1.25
VEGFA-230ENST00000640482 CLDN18P56856 261 aa22.83■■□□□ 1.25
VEGFA-230ENST00000640482 C17orf67Q0P5P2 114 aa22.83■■□□□ 1.25
VEGFA-230ENST00000640482 C6orf136Q5SQH8 315 aa22.83■■□□□ 1.25
VEGFA-230ENST00000640482 RAET1LQ5VY80 246 aa22.83■■□□□ 1.25
VEGFA-230ENST00000640482 MFSD12Q6NUT3 480 aa22.83■■□□□ 1.25
VEGFA-230ENST00000640482 NATD1Q8N6N6 113 aa22.83■■□□□ 1.25
VEGFA-230ENST00000640482 OR7A2PQ8NGA2 310 aa22.83■■□□□ 1.25
VEGFA-230ENST00000640482 PKNOX2Q96KN3 472 aa22.83■■□□□ 1.25
VEGFA-230ENST00000640482 SFXN3Q9BWM7 321 aa22.83■■□□□ 1.25
VEGFA-230ENST00000640482 ACBD3Q9H3P7 528 aa22.83■■□□□ 1.25
VEGFA-230ENST00000640482 SSU72Q9NP77 194 aaKnown RBP22.83■■□□□ 1.25
VEGFA-230ENST00000640482 ITGB1BP2Q9UKP3 347 aa22.83■■□□□ 1.25
VEGFA-230ENST00000640482 RAB21Q9UL25 225 aa22.83■■□□□ 1.25
VEGFA-230ENST00000640482 A0A1W2PRB8 838 aa22.82■■□□□ 1.24
VEGFA-230ENST00000640482 EEF1E1-BLOC1S5C9J1V9 151 aa22.82■■□□□ 1.24
VEGFA-230ENST00000640482 LINC01387J3KSC0 135 aa22.82■■□□□ 1.24
VEGFA-230ENST00000640482 EEF1E1O43324 174 aaKnown RBP22.82■■□□□ 1.24
VEGFA-230ENST00000640482 RCBTB2O95199 551 aa22.82■■□□□ 1.24
VEGFA-230ENST00000640482 IGKV1D-16P01601 117 aa22.82■■□□□ 1.24
VEGFA-230ENST00000640482 ACP2P11117 423 aa22.82■■□□□ 1.24
VEGFA-230ENST00000640482 EFNA1P20827 205 aaPredicted RBP22.82■■□□□ 1.24
VEGFA-230ENST00000640482 PRIM2P49643 509 aa22.82■■□□□ 1.24
VEGFA-230ENST00000640482 AGFG1P52594 562 aaKnown RBP22.82■■□□□ 1.24
VEGFA-230ENST00000640482 B3GALT5-AS1P59052 145 aa22.82■■□□□ 1.24
VEGFA-230ENST00000640482 PTGR1Q14914 329 aa22.82■■□□□ 1.24
VEGFA-230ENST00000640482 GRAMD1BQ3KR37 738 aa22.82■■□□□ 1.24
VEGFA-230ENST00000640482 CPTPQ5TA50 214 aa22.82■■□□□ 1.24
VEGFA-230ENST00000640482 IL23RQ5VWK5 629 aa22.82■■□□□ 1.24
VEGFA-230ENST00000640482 CHMP1BQ7LBR1 199 aa22.82■■□□□ 1.24
VEGFA-230ENST00000640482 EXOC3L1Q86VI1 746 aa22.82■■□□□ 1.24
VEGFA-230ENST00000640482 ZZZ3Q8IYH5 903 aa22.82■■□□□ 1.24
VEGFA-230ENST00000640482 GOT1L1Q8NHS2 421 aaPredicted RBP22.82■■□□□ 1.24
VEGFA-230ENST00000640482 FBXO30Q8TB52 745 aa22.82■■□□□ 1.24
VEGFA-230ENST00000640482 TUBGCP3Q96CW5 907 aa22.82■■□□□ 1.24
VEGFA-230ENST00000640482 PRPF18Q99633 342 aaKnown RBP22.82■■□□□ 1.24
VEGFA-230ENST00000640482 G6PC3Q9BUM1 346 aa22.82■■□□□ 1.24
VEGFA-230ENST00000640482 RTN4RQ9BZR6 473 aa22.82■■□□□ 1.24
VEGFA-230ENST00000640482 ZCCHC3Q9NUD5 404 aaKnown RBP22.82■■□□□ 1.24
VEGFA-230ENST00000640482 CLCF1Q9UBD9 225 aa22.82■■□□□ 1.24
VEGFA-230ENST00000640482 EIF3LQ9Y262 564 aaKnown RBP22.82■■□□□ 1.24
VEGFA-230ENST00000640482 TM9SF1O15321 606 aa22.81■■□□□ 1.24
VEGFA-230ENST00000640482 BIRC5O15392 142 aa22.81■■□□□ 1.24
VEGFA-230ENST00000640482 ANGPTL1O95841 491 aa22.81■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms