RNA–Protein interactions for RNA: ENST00000637494.1

CLN6-221, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5 BASIC

Gene CLN6, Length 765 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-221ENST00000637494 C17orf67Q0P5P2 114 aa17.19■□□□□ 0.34
CLN6-221ENST00000637494 PDE7AQ13946 482 aa17.19■□□□□ 0.34
CLN6-221ENST00000637494 BCL2A1Q16548 175 aa17.19■□□□□ 0.34
CLN6-221ENST00000637494 ZCCHC23Q6ZST2 131 aa17.19■□□□□ 0.34
CLN6-221ENST00000637494 GRAMD2AQ8IUY3 354 aa17.19■□□□□ 0.34
CLN6-221ENST00000637494 MEIOBQ8N635 442 aa17.19■□□□□ 0.34
CLN6-221ENST00000637494 C9orf106Q8NAJ2 232 aa17.19■□□□□ 0.34
CLN6-221ENST00000637494 RMND5BQ96G75 393 aaPredicted RBP17.19■□□□□ 0.34
CLN6-221ENST00000637494 MS4A4EQ96PG1 132 aa17.19■□□□□ 0.34
CLN6-221ENST00000637494 UCN2Q96RP3 112 aa17.19■□□□□ 0.34
CLN6-221ENST00000637494 SH3GL2Q99962 352 aa17.19■□□□□ 0.34
CLN6-221ENST00000637494 SFXN3Q9BWM7 321 aa17.19■□□□□ 0.34
CLN6-221ENST00000637494 ATAD3AQ9NVI7 634 aa17.19■□□□□ 0.34
CLN6-221ENST00000637494 DNAJB12Q9NXW2 375 aaKnown RBP17.19■□□□□ 0.34
CLN6-221ENST00000637494 MED11Q9P086 117 aa17.19■□□□□ 0.34
CLN6-221ENST00000637494 EDARQ9UNE0 448 aa17.19■□□□□ 0.34
CLN6-221ENST00000637494 INTS1Q8N201 2190 aaKnown RBP17.19■□□□□ 0.34
CLN6-221ENST00000637494 FBN2P35556 2912 aa17.19■□□□□ 0.34
CLN6-221ENST00000637494 ZIC3O60481 467 aa17.18■□□□□ 0.34
CLN6-221ENST00000637494 PEX11AO75192 247 aa17.18■□□□□ 0.34
CLN6-221ENST00000637494 RCBTB2O95199 551 aa17.18■□□□□ 0.34
CLN6-221ENST00000637494 ZNF708P17019 499 aa17.18■□□□□ 0.34
CLN6-221ENST00000637494 POU3F2P20265 443 aaPredicted RBP17.18■□□□□ 0.34
CLN6-221ENST00000637494 PRIM2P49643 509 aa17.18■□□□□ 0.34
CLN6-221ENST00000637494 AGFG1P52594 562 aaKnown RBP17.18■□□□□ 0.34
CLN6-221ENST00000637494 DIO3P55073 304 aa17.18■□□□□ 0.34
CLN6-221ENST00000637494 KRT71Q3SY84 523 aa17.18■□□□□ 0.34
CLN6-221ENST00000637494 FLYWCH1Q4VC44 716 aa17.18■□□□□ 0.34
CLN6-221ENST00000637494 ZNF385BQ569K4 471 aa17.18■□□□□ 0.34
CLN6-221ENST00000637494 FBXW10Q5XX13 1052 aa17.18■□□□□ 0.34
CLN6-221ENST00000637494 NUDCD3Q8IVD9 361 aa17.18■□□□□ 0.34
CLN6-221ENST00000637494 NATD1Q8N6N6 113 aa17.18■□□□□ 0.34
CLN6-221ENST00000637494 FADS6Q8N9I5 356 aa17.18■□□□□ 0.34
CLN6-221ENST00000637494 OR2M3Q8NG83 312 aa17.18■□□□□ 0.34
CLN6-221ENST00000637494 DUSP19Q8WTR2 217 aa17.18■□□□□ 0.34
CLN6-221ENST00000637494 FAM222BQ8WU58 562 aa17.18■□□□□ 0.34
CLN6-221ENST00000637494 CHMP6Q96FZ7 201 aa17.18■□□□□ 0.34
CLN6-221ENST00000637494 PRPF18Q99633 342 aaKnown RBP17.18■□□□□ 0.34
CLN6-221ENST00000637494 PIGQQ9BRB3 760 aa17.18■□□□□ 0.34
CLN6-221ENST00000637494 TMEM109Q9BVC6 243 aa17.18■□□□□ 0.34
CLN6-221ENST00000637494 POLDIP3Q9BY77 421 aaKnown RBP17.18■□□□□ 0.34
CLN6-221ENST00000637494 STOML1Q9UBI4 398 aa17.18■□□□□ 0.34
CLN6-221ENST00000637494 TUBAL3A6NHL2 446 aa17.17■□□□□ 0.34
CLN6-221ENST00000637494 RGS16O15492 202 aaPredicted RBP17.17■□□□□ 0.34
CLN6-221ENST00000637494 CTIFO43310 598 aaKnown RBP17.17■□□□□ 0.34
CLN6-221ENST00000637494 LYPLA1O75608 230 aaPredicted RBP17.17■□□□□ 0.34
CLN6-221ENST00000637494 NKX2-2O95096 273 aa17.17■□□□□ 0.34
CLN6-221ENST00000637494 BPGMP07738 259 aa17.17■□□□□ 0.34
CLN6-221ENST00000637494 ALOX5P09917 674 aa17.17■□□□□ 0.34
CLN6-221ENST00000637494 HPGDP15428 266 aa17.17■□□□□ 0.34
CLN6-221ENST00000637494 FRKP42685 505 aaPredicted RBP17.17■□□□□ 0.34
CLN6-221ENST00000637494 CPA2P48052 419 aa17.17■□□□□ 0.34
CLN6-221ENST00000637494 MAD2L1Q13257 205 aaPredicted RBP17.17■□□□□ 0.34
CLN6-221ENST00000637494 SNTB1Q13884 538 aaKnown RBP17.17■□□□□ 0.34
CLN6-221ENST00000637494 UGT3A2Q3SY77 523 aa17.17■□□□□ 0.34
CLN6-221ENST00000637494 OR2A2Q6IF42 318 aa17.17■□□□□ 0.34
CLN6-221ENST00000637494 ZCCHC12Q6PEW1 402 aa17.17■□□□□ 0.34
CLN6-221ENST00000637494 POMZP3Q6PJE2 187 aa17.17■□□□□ 0.34
CLN6-221ENST00000637494 MARCH3Q86UD3 253 aa17.17■□□□□ 0.34
CLN6-221ENST00000637494 UBQLNLQ8IYU4 475 aa17.17■□□□□ 0.34
CLN6-221ENST00000637494 FNDC5Q8NAU1 212 aa17.17■□□□□ 0.34
CLN6-221ENST00000637494 OR6Y1Q8NGX8 325 aa17.17■□□□□ 0.34
CLN6-221ENST00000637494 PIK3R3Q92569 461 aa17.17■□□□□ 0.34
CLN6-221ENST00000637494 INTS12Q96CB8 462 aaKnown RBP17.17■□□□□ 0.34
CLN6-221ENST00000637494 PIGMQ9H3S5 423 aa17.17■□□□□ 0.34
CLN6-221ENST00000637494 CRIM1Q9NZV1 1036 aa17.17■□□□□ 0.34
CLN6-221ENST00000637494 ATP6V1HQ9UI12 483 aa17.17■□□□□ 0.34
CLN6-221ENST00000637494 ADGRG4Q8IZF6 3080 aa17.17■□□□□ 0.34
CLN6-221ENST00000637494 A0A1W2PRB8 838 aa17.16■□□□□ 0.34
CLN6-221ENST00000637494 GXYLT2A0PJZ3 443 aa17.16■□□□□ 0.34
CLN6-221ENST00000637494 SCAMP2O15127 329 aaKnown RBP17.16■□□□□ 0.34
CLN6-221ENST00000637494 SKAP2O75563 359 aaPredicted RBP17.16■□□□□ 0.34
CLN6-221ENST00000637494 HSPA4LO95757 839 aa17.16■□□□□ 0.34
CLN6-221ENST00000637494 ANGPTL1O95841 491 aa17.16■□□□□ 0.34
CLN6-221ENST00000637494 LCN1P31025 176 aa17.16■□□□□ 0.34
CLN6-221ENST00000637494 SERPINB4P48594 390 aa17.16■□□□□ 0.34
CLN6-221ENST00000637494 CLDN18P56856 261 aa17.16■□□□□ 0.34
CLN6-221ENST00000637494 SORDQ00796 357 aa17.16■□□□□ 0.34
CLN6-221ENST00000637494 MLC1Q15049 377 aa17.16■□□□□ 0.34
CLN6-221ENST00000637494 GRAMD1BQ3KR37 738 aa17.16■□□□□ 0.34
CLN6-221ENST00000637494 GLYR1Q49A26 553 aaPredicted RBP17.16■□□□□ 0.34
CLN6-221ENST00000637494 ADGRE4PQ86SQ3 457 aa17.16■□□□□ 0.34
CLN6-221ENST00000637494 MREGQ8N565 214 aa17.16■□□□□ 0.34
CLN6-221ENST00000637494 COX18Q8N8Q8 333 aa17.16■□□□□ 0.34
CLN6-221ENST00000637494 JADE3Q92613 823 aa17.16■□□□□ 0.34
CLN6-221ENST00000637494 TUBGCP3Q96CW5 907 aa17.16■□□□□ 0.34
CLN6-221ENST00000637494 RBM24Q9BX46 236 aaKnown RBP17.16■□□□□ 0.34
CLN6-221ENST00000637494 ZCCHC3Q9NUD5 404 aaKnown RBP17.16■□□□□ 0.34
CLN6-221ENST00000637494 FLRT3Q9NZU0 649 aa17.16■□□□□ 0.34
CLN6-221ENST00000637494 NTMQ9P121 344 aa17.16■□□□□ 0.34
CLN6-221ENST00000637494 CLCF1Q9UBD9 225 aa17.16■□□□□ 0.34
CLN6-221ENST00000637494 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.16■□□□□ 0.34
CLN6-221ENST00000637494 EIF3LQ9Y262 564 aaKnown RBP17.16■□□□□ 0.34
CLN6-221ENST00000637494 V9GYY5 206 aaPredicted RBP17.16■□□□□ 0.34
CLN6-221ENST00000637494 NDUFB5O43674 189 aa17.15■□□□□ 0.34
CLN6-221ENST00000637494 CTAG2O75638 210 aa17.15■□□□□ 0.34
CLN6-221ENST00000637494 RPS3AP61247 264 aaKnown RBP17.15■□□□□ 0.34
CLN6-221ENST00000637494 LSM12Q3MHD2 195 aaKnown RBP17.15■□□□□ 0.34
CLN6-221ENST00000637494 XKR7Q5GH72 579 aa17.15■□□□□ 0.34
CLN6-221ENST00000637494 CPTPQ5TA50 214 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms