RNA–Protein interactions for RNA: ENST00000636183.1

CLN5-208, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CLN5, Length 6,664 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-208ENST00000636183 FITM2Q8N6M3 262 aa15.22■□□□□ 0.03
CLN5-208ENST00000636183 ERVK13-1Q9NX77 482 aa15.22■□□□□ 0.03
CLN5-208ENST00000636183 A0A1B0GTW7 788 aa15.22■□□□□ 0.03
CLN5-208ENST00000636183 RAB27BO00194 218 aa15.22■□□□□ 0.03
CLN5-208ENST00000636183 TMBIM6P55061 237 aa15.22■□□□□ 0.03
CLN5-208ENST00000636183 MORN1Q5T089 497 aa15.22■□□□□ 0.03
CLN5-208ENST00000636183 ASRGL1Q7L266 308 aa15.22■□□□□ 0.03
CLN5-208ENST00000636183 OR6C6A6NF89 314 aa15.21■□□□□ 0.03
CLN5-208ENST00000636183 PRSS56P0CW18 603 aa15.21■□□□□ 0.03
CLN5-208ENST00000636183 ITGB7P26010 798 aa15.21■□□□□ 0.03
CLN5-208ENST00000636183 ACTC1P68032 377 aa15.21■□□□□ 0.03
CLN5-208ENST00000636183 ACTA1P68133 377 aa15.21■□□□□ 0.03
CLN5-208ENST00000636183 ZXDBP98169 803 aa15.21■□□□□ 0.03
CLN5-208ENST00000636183 MBTPS1Q14703 1052 aa15.21■□□□□ 0.03
CLN5-208ENST00000636183 TMEM130Q8N3G9 435 aa15.21■□□□□ 0.03
CLN5-208ENST00000636183 C1QTNF6Q9BXI9 259 aa15.21■□□□□ 0.03
CLN5-208ENST00000636183 TNFRSF19Q9NS68 423 aa15.21■□□□□ 0.03
CLN5-208ENST00000636183 SERPINA5P05154 406 aa15.21■□□□□ 0.03
CLN5-208ENST00000636183 DEFA4P12838 97 aa15.21■□□□□ 0.03
CLN5-208ENST00000636183 INCA1Q0VD86 236 aa15.21■□□□□ 0.03
CLN5-208ENST00000636183 ZNF551Q7Z340 670 aaPredicted RBP15.21■□□□□ 0.03
CLN5-208ENST00000636183 RBM12BQ8IXT5 1001 aaKnown RBP15.21■□□□□ 0.03
CLN5-208ENST00000636183 IL17RDQ8NFM7 739 aa15.21■□□□□ 0.03
CLN5-208ENST00000636183 LGALS13Q9UHV8 139 aa15.21■□□□□ 0.03
CLN5-208ENST00000636183 ZNF451Q9Y4E5 1061 aa15.21■□□□□ 0.03
CLN5-208ENST00000636183 ATP23Q9Y6H3 246 aa15.21■□□□□ 0.03
CLN5-208ENST00000636183 AQP12BA6NM10 295 aa15.21■□□□□ 0.03
CLN5-208ENST00000636183 EPOP01588 193 aa15.21■□□□□ 0.03
CLN5-208ENST00000636183 MT-ND2P03891 347 aa15.21■□□□□ 0.03
CLN5-208ENST00000636183 NUDT1P36639 197 aa15.21■□□□□ 0.03
CLN5-208ENST00000636183 ADARB1P78563 741 aaKnown RBP15.21■□□□□ 0.03
CLN5-208ENST00000636183 PNCKQ6P2M8 343 aa15.21■□□□□ 0.03
CLN5-208ENST00000636183 AQP12AQ8IXF9 295 aa15.21■□□□□ 0.03
CLN5-208ENST00000636183 ZNF454Q8N9F8 522 aa15.21■□□□□ 0.03
CLN5-208ENST00000636183 CIDECQ96AQ7 238 aaPredicted RBP15.21■□□□□ 0.03
CLN5-208ENST00000636183 SYT4Q9H2B2 425 aa15.21■□□□□ 0.03
CLN5-208ENST00000636183 PTGDR2Q9Y5Y4 395 aa15.21■□□□□ 0.03
CLN5-208ENST00000636183 SDK1Q7Z5N4 2213 aa15.21■□□□□ 0.03
CLN5-208ENST00000636183 SLIT3O75094 1523 aa15.21■□□□□ 0.03
CLN5-208ENST00000636183 SLC22A2O15244 555 aa15.21■□□□□ 0.03
CLN5-208ENST00000636183 ZNF623O75123 536 aa15.21■□□□□ 0.03
CLN5-208ENST00000636183 GSTP1P09211 210 aaKnown RBP15.21■□□□□ 0.03
CLN5-208ENST00000636183 NKX3-2P78367 333 aa15.21■□□□□ 0.03
CLN5-208ENST00000636183 KIAA1614Q5VZ46 1190 aa15.21■□□□□ 0.03
CLN5-208ENST00000636183 OPN5Q6U736 354 aa15.21■□□□□ 0.03
CLN5-208ENST00000636183 VWA5B2Q8N398 1253 aa15.21■□□□□ 0.03
CLN5-208ENST00000636183 ESX1Q8N693 406 aa15.21■□□□□ 0.03
CLN5-208ENST00000636183 TIMD4Q96H15 378 aa15.21■□□□□ 0.03
CLN5-208ENST00000636183 CTBSQ01459 385 aa15.21■□□□□ 0.02
CLN5-208ENST00000636183 EXOSC7Q15024 291 aaKnown RBP15.21■□□□□ 0.02
CLN5-208ENST00000636183 PLBD1Q6P4A8 553 aa15.21■□□□□ 0.02
CLN5-208ENST00000636183 TMEM40Q8WWA1 233 aa15.21■□□□□ 0.02
CLN5-208ENST00000636183 OR4K3Q96R72 315 aa15.21■□□□□ 0.02
CLN5-208ENST00000636183 PREBQ9HCU5 417 aa15.21■□□□□ 0.02
CLN5-208ENST00000636183 MRPS2Q9Y399 296 aaKnown RBP15.21■□□□□ 0.02
CLN5-208ENST00000636183 FAM96BQ9Y3D0 163 aa15.21■□□□□ 0.02
CLN5-208ENST00000636183 CRYM-AS1A6NIL9 109 aa15.2■□□□□ 0.02
CLN5-208ENST00000636183 SSTP61278 116 aa15.2■□□□□ 0.02
CLN5-208ENST00000636183 DCDP81605 110 aaKnown RBP15.2■□□□□ 0.02
CLN5-208ENST00000636183 VMACQ2NL98 169 aa15.2■□□□□ 0.02
CLN5-208ENST00000636183 EXTL2Q9UBQ6 330 aa15.2■□□□□ 0.02
CLN5-208ENST00000636183 SLC7A7Q9UM01 511 aa15.2■□□□□ 0.02
CLN5-208ENST00000636183 ZBTB32Q9Y2Y4 487 aaPredicted RBP15.2■□□□□ 0.02
CLN5-208ENST00000636183 IFNA1P01562 189 aa15.2■□□□□ 0.02
CLN5-208ENST00000636183 IFNA17P01571 189 aa15.2■□□□□ 0.02
CLN5-208ENST00000636183 SLC6A8P48029 635 aa15.2■□□□□ 0.02
CLN5-208ENST00000636183 ZNF33AQ06730 810 aa15.2■□□□□ 0.02
CLN5-208ENST00000636183 SLC35B2Q8TB61 432 aa15.2■□□□□ 0.02
CLN5-208ENST00000636183 MSI2Q96DH6 328 aaKnown RBP15.2■□□□□ 0.02
CLN5-208ENST00000636183 SSU72Q9NP77 194 aaKnown RBP15.2■□□□□ 0.02
CLN5-208ENST00000636183 ATP13A2Q9NQ11 1180 aa15.2■□□□□ 0.02
CLN5-208ENST00000636183 RLIMQ9NVW2 624 aa15.2■□□□□ 0.02
CLN5-208ENST00000636183 SCAMP2O15127 329 aaKnown RBP15.2■□□□□ 0.02
CLN5-208ENST00000636183 ACTA2P62736 377 aa15.2■□□□□ 0.02
CLN5-208ENST00000636183 ACTG2P63267 376 aa15.2■□□□□ 0.02
CLN5-208ENST00000636183 PIGGQ5H8A4 983 aa15.2■□□□□ 0.02
CLN5-208ENST00000636183 TLDC1Q6P9B6 456 aa15.2■□□□□ 0.02
CLN5-208ENST00000636183 ZFP41Q8N8Y5 198 aa15.2■□□□□ 0.02
CLN5-208ENST00000636183 NEIL3Q8TAT5 605 aa15.2■□□□□ 0.02
CLN5-208ENST00000636183 MTHFD2LQ9H903 347 aaPredicted RBP15.2■□□□□ 0.02
CLN5-208ENST00000636183 PHYHO14832 338 aa15.2■□□□□ 0.02
CLN5-208ENST00000636183 EGFP01133 1207 aa15.2■□□□□ 0.02
CLN5-208ENST00000636183 HOXD8P13378 290 aaPredicted RBP15.2■□□□□ 0.02
CLN5-208ENST00000636183 ATF4P18848 351 aaPredicted RBP15.2■□□□□ 0.02
CLN5-208ENST00000636183 IDUAP35475 653 aa15.2■□□□□ 0.02
CLN5-208ENST00000636183 POU4F2Q12837 409 aa15.2■□□□□ 0.02
CLN5-208ENST00000636183 SHHQ15465 462 aa15.2■□□□□ 0.02
CLN5-208ENST00000636183 ANKRD54Q6NXT1 300 aa15.2■□□□□ 0.02
CLN5-208ENST00000636183 MYNNQ9NPC7 610 aa15.2■□□□□ 0.02
CLN5-208ENST00000636183 NDUFAF4Q9P032 175 aa15.2■□□□□ 0.02
CLN5-208ENST00000636183 MAP4K2Q12851 820 aa15.2■□□□□ 0.02
CLN5-208ENST00000636183 MPPED2Q15777 294 aa15.2■□□□□ 0.02
CLN5-208ENST00000636183 OR1S1Q8NH92 325 aa15.2■□□□□ 0.02
CLN5-208ENST00000636183 ZNF675Q8TD23 568 aa15.2■□□□□ 0.02
CLN5-208ENST00000636183 LIPHQ8WWY8 451 aa15.2■□□□□ 0.02
CLN5-208ENST00000636183 ZNF382Q96SR6 550 aa15.2■□□□□ 0.02
CLN5-208ENST00000636183 GFOD1Q9NXC2 390 aa15.2■□□□□ 0.02
CLN5-208ENST00000636183 PTGER4P35408 488 aa15.19■□□□□ 0.02
CLN5-208ENST00000636183 PGGT1BP53609 377 aa15.19■□□□□ 0.02
CLN5-208ENST00000636183 ROR2Q01974 943 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms