RNA–Protein interactions for RNA: ENST00000635997.1

NEDD4L-238, Transcript of neural precursor cell expressed, developmentally down-regulated 4-like, E3 ubiquitin protein ligase, human

TSL 5 BASIC

Gene NEDD4L, Length 4,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NEDD4L-238	ENST00000635997	CCDC187	A0A096LP49	1063 aa		13.47	□□□□□ -0.25
NEDD4L-238	ENST00000635997	SIGLEC6	O43699	453 aa		13.47	□□□□□ -0.25
NEDD4L-238	ENST00000635997	SPTB	P11277	2137 aa		13.47	□□□□□ -0.25
NEDD4L-238	ENST00000635997	MTHFD2	P13995	350 aa		13.47	□□□□□ -0.25
NEDD4L-238	ENST00000635997	UGT2B7	P16662	529 aa		13.47	□□□□□ -0.25
NEDD4L-238	ENST00000635997	ARFRP1	Q13795	201 aa		13.47	□□□□□ -0.25
NEDD4L-238	ENST00000635997	GPNMB	Q14956	572 aa		13.47	□□□□□ -0.25
NEDD4L-238	ENST00000635997	LIPK	Q5VXJ0	399 aa		13.47	□□□□□ -0.25
NEDD4L-238	ENST00000635997	LRFN4	Q6PJG9	635 aa		13.47	□□□□□ -0.25
NEDD4L-238	ENST00000635997	TMEM184A	Q6ZMB5	413 aa		13.47	□□□□□ -0.25
NEDD4L-238	ENST00000635997	IGFN1	Q86VF2	1251 aa		13.47	□□□□□ -0.25
NEDD4L-238	ENST00000635997	MEIOB	Q8N635	442 aa		13.47	□□□□□ -0.25
NEDD4L-238	ENST00000635997	CDS1	Q92903	461 aa		13.47	□□□□□ -0.25
NEDD4L-238	ENST00000635997	ZNF696	Q9H7X3	374 aa		13.47	□□□□□ -0.25
NEDD4L-238	ENST00000635997	PDF	Q9HBH1	243 aa		13.47	□□□□□ -0.25
NEDD4L-238	ENST00000635997	LAMP5	Q9UJQ1	280 aa		13.47	□□□□□ -0.25
NEDD4L-238	ENST00000635997	NOTCH2	Q04721	2471 aa		13.47	□□□□□ -0.25
NEDD4L-238	ENST00000635997		A0A1W2PRG6	482 aa		13.46	□□□□□ -0.25
NEDD4L-238	ENST00000635997		A0A1W2PRQ8	180 aa		13.46	□□□□□ -0.25
NEDD4L-238	ENST00000635997		H7C0S8	307 aa		13.46	□□□□□ -0.25
NEDD4L-238	ENST00000635997	ACOX3	O15254	700 aa		13.46	□□□□□ -0.25
NEDD4L-238	ENST00000635997	RHCE	P18577	417 aa		13.46	□□□□□ -0.25
NEDD4L-238	ENST00000635997	EPHA5	P54756	1037 aa		13.46	□□□□□ -0.25
NEDD4L-238	ENST00000635997	DCDC5	Q6ZRR9	648 aa		13.46	□□□□□ -0.25
NEDD4L-238	ENST00000635997	LINC00471	Q8N535	108 aa		13.46	□□□□□ -0.25
NEDD4L-238	ENST00000635997	ANKFN1	Q8N957	763 aa		13.46	□□□□□ -0.25
NEDD4L-238	ENST00000635997	RCBTB1	Q8NDN9	531 aa		13.46	□□□□□ -0.25
NEDD4L-238	ENST00000635997	OR2L3	Q8NG85	312 aa		13.46	□□□□□ -0.25
NEDD4L-238	ENST00000635997	OR5L2	Q8NGL0	311 aa		13.46	□□□□□ -0.25
NEDD4L-238	ENST00000635997	C16orf58	Q96GQ5	468 aa		13.46	□□□□□ -0.25
NEDD4L-238	ENST00000635997	KCTD7	Q96MP8	289 aa		13.46	□□□□□ -0.25
NEDD4L-238	ENST00000635997	ANKRA2	Q9H9E1	313 aa		13.46	□□□□□ -0.25
NEDD4L-238	ENST00000635997	RIMS3	Q9UJD0	308 aa		13.46	□□□□□ -0.25
NEDD4L-238	ENST00000635997	ENPP4	Q9Y6X5	453 aa		13.46	□□□□□ -0.25
NEDD4L-238	ENST00000635997	DENR	O43583	198 aa	Known RBP	13.46	□□□□□ -0.25
NEDD4L-238	ENST00000635997	TACSTD2	P09758	323 aa		13.46	□□□□□ -0.25
NEDD4L-238	ENST00000635997	ZNF20	P17024	532 aa		13.46	□□□□□ -0.25
NEDD4L-238	ENST00000635997	ACVR1B	P36896	505 aa		13.46	□□□□□ -0.25
NEDD4L-238	ENST00000635997	CRISP1	P54107	249 aa		13.46	□□□□□ -0.25
NEDD4L-238	ENST00000635997	HENMT1	Q5T8I9	393 aa	Known RBP	13.46	□□□□□ -0.25
NEDD4L-238	ENST00000635997	ADNP2	Q6IQ32	1131 aa		13.46	□□□□□ -0.25
NEDD4L-238	ENST00000635997	LINGO2	Q7L985	606 aa		13.46	□□□□□ -0.25
NEDD4L-238	ENST00000635997	ETFBKMT	Q8IXQ9	262 aa		13.46	□□□□□ -0.25
NEDD4L-238	ENST00000635997	SETD6	Q8TBK2	473 aa		13.46	□□□□□ -0.25
NEDD4L-238	ENST00000635997	FATE1	Q969F0	183 aa		13.46	□□□□□ -0.25
NEDD4L-238	ENST00000635997	MTHFD2L	Q9H903	347 aa	Predicted RBP	13.46	□□□□□ -0.25
NEDD4L-238	ENST00000635997	CD93	Q9NPY3	652 aa		13.46	□□□□□ -0.25
NEDD4L-238	ENST00000635997	AGPAT4	Q9NRZ5	378 aa		13.46	□□□□□ -0.25
NEDD4L-238	ENST00000635997	TRIM3	O75382	744 aa	Predicted RBP	13.46	□□□□□ -0.25
NEDD4L-238	ENST00000635997	NPPB	P16860	134 aa		13.46	□□□□□ -0.25
NEDD4L-238	ENST00000635997	FAM219B	Q5XKK7	198 aa		13.46	□□□□□ -0.25
NEDD4L-238	ENST00000635997	DNM1P34	Q6PK57	102 aa		13.46	□□□□□ -0.25
NEDD4L-238	ENST00000635997	SLC15A4	Q8N697	577 aa		13.46	□□□□□ -0.25
NEDD4L-238	ENST00000635997	OR52R1	Q8NGF1	315 aa		13.46	□□□□□ -0.25
NEDD4L-238	ENST00000635997	SLC23A2	Q9UGH3	650 aa		13.46	□□□□□ -0.25
NEDD4L-238	ENST00000635997	MT-ND2	P03891	347 aa		13.46	□□□□□ -0.26
NEDD4L-238	ENST00000635997	SLC19A1	P41440	591 aa		13.46	□□□□□ -0.26
NEDD4L-238	ENST00000635997	SLC14A2	Q15849	920 aa		13.46	□□□□□ -0.26
NEDD4L-238	ENST00000635997	RSPO4	Q2I0M5	234 aa	Predicted RBP	13.46	□□□□□ -0.26
NEDD4L-238	ENST00000635997	TMEM44	Q2T9K0	475 aa		13.46	□□□□□ -0.26
NEDD4L-238	ENST00000635997	LCN8	Q6JVE9	175 aa		13.46	□□□□□ -0.26
NEDD4L-238	ENST00000635997	ZNF627	Q7L945	461 aa		13.46	□□□□□ -0.26
NEDD4L-238	ENST00000635997	NAXD	Q8IW45	347 aa		13.46	□□□□□ -0.26
NEDD4L-238	ENST00000635997	CDRT4	Q8N9R6	151 aa		13.46	□□□□□ -0.26
NEDD4L-238	ENST00000635997	RSC1A1	Q92681	617 aa		13.46	□□□□□ -0.26
NEDD4L-238	ENST00000635997	DPH1	Q9BZG8	443 aa		13.46	□□□□□ -0.26
NEDD4L-238	ENST00000635997	ZNF304	Q9HCX3	659 aa		13.46	□□□□□ -0.26
NEDD4L-238	ENST00000635997	POT1	Q9NUX5	634 aa		13.46	□□□□□ -0.26
NEDD4L-238	ENST00000635997	KLHL42	Q9P2K6	505 aa		13.46	□□□□□ -0.26
NEDD4L-238	ENST00000635997	TMEM5	Q9Y2B1	443 aa		13.46	□□□□□ -0.26
NEDD4L-238	ENST00000635997	CYB5A	P00167	134 aa		13.45	□□□□□ -0.26
NEDD4L-238	ENST00000635997	MYF5	P13349	255 aa		13.45	□□□□□ -0.26
NEDD4L-238	ENST00000635997	DCT	P40126	519 aa		13.45	□□□□□ -0.26
NEDD4L-238	ENST00000635997	LTB4R	Q15722	352 aa		13.45	□□□□□ -0.26
NEDD4L-238	ENST00000635997	DEFB109B	Q30KR1	87 aa		13.45	□□□□□ -0.26
NEDD4L-238	ENST00000635997	SNX29P2	Q8IUI4	249 aa		13.45	□□□□□ -0.26
NEDD4L-238	ENST00000635997	OR52E2	Q8NGJ4	325 aa		13.45	□□□□□ -0.26
NEDD4L-238	ENST00000635997	TBC1D20	Q96BZ9	403 aa		13.45	□□□□□ -0.26
NEDD4L-238	ENST00000635997	CEPT1	Q9Y6K0	416 aa		13.45	□□□□□ -0.26
NEDD4L-238	ENST00000635997	CROCC	Q5TZA2	2017 aa		13.45	□□□□□ -0.26
NEDD4L-238	ENST00000635997	NSG1	A0A0A6YYJ2	146 aa		13.45	□□□□□ -0.26
NEDD4L-238	ENST00000635997	PRAMEF33	A0A0G2JMD5	474 aa		13.45	□□□□□ -0.26
NEDD4L-238	ENST00000635997	TAPBP	O15533	448 aa		13.45	□□□□□ -0.26
NEDD4L-238	ENST00000635997	AIFM1	O95831	613 aa		13.45	□□□□□ -0.26
NEDD4L-238	ENST00000635997	TUBA4A	P68366	448 aa		13.45	□□□□□ -0.26
NEDD4L-238	ENST00000635997	E2F2	Q14209	437 aa		13.45	□□□□□ -0.26
NEDD4L-238	ENST00000635997	HES3	Q5TGS1	186 aa		13.45	□□□□□ -0.26
NEDD4L-238	ENST00000635997	KIAA0907	Q7Z7F0	614 aa	Predicted RBP	13.45	□□□□□ -0.26
NEDD4L-238	ENST00000635997	ZSWIM9	Q86XI8	627 aa		13.45	□□□□□ -0.26
NEDD4L-238	ENST00000635997	MZB1	Q8WU39	189 aa		13.45	□□□□□ -0.26
NEDD4L-238	ENST00000635997	FCGR1B	Q92637	280 aa		13.45	□□□□□ -0.26
NEDD4L-238	ENST00000635997	TMCO6	Q96DC7	493 aa		13.45	□□□□□ -0.26
NEDD4L-238	ENST00000635997	SGTB	Q96EQ0	304 aa		13.45	□□□□□ -0.26
NEDD4L-238	ENST00000635997	NARS2	Q96I59	477 aa	Known RBP	13.45	□□□□□ -0.26
NEDD4L-238	ENST00000635997	CHMP1A	Q9HD42	196 aa	Predicted RBP	13.45	□□□□□ -0.26
NEDD4L-238	ENST00000635997	COMMD9	Q9P000	198 aa		13.45	□□□□□ -0.26
NEDD4L-238	ENST00000635997	ZSCAN5B	A6NJL1	495 aa		13.45	□□□□□ -0.26
NEDD4L-238	ENST00000635997	FAAH	O00519	579 aa		13.45	□□□□□ -0.26
NEDD4L-238	ENST00000635997	YY2	O15391	372 aa		13.45	□□□□□ -0.26
NEDD4L-238	ENST00000635997		P04436	131 aa		13.45	□□□□□ -0.26

Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms