RNA–Protein interactions for RNA: ENST00000630925.1

SDCBP-213, Transcript of syndecan binding protein, humanhuman

TSL 5 BASIC

Gene SDCBP, Length 2,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-213ENST00000630925 BEST2Q8NFU1 509 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 IFT81Q8WYA0 676 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 NAT6Q93015 286 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 HGDQ93099 445 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 STAMBPL1Q96FJ0 436 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 WDYHV1Q96HA8 205 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 MARK4Q96L34 752 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 C12orf42Q96LP6 360 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 OR5B2Q96R09 309 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 AMBRA1Q9C0C7 1298 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 SLITRK2Q9H156 845 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 PRSS16Q9NQE7 514 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 PARVAQ9NVD7 372 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 ARMC1Q9NVT9 282 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 LYARQ9NX58 379 aaKnown RBP4.49□□□□□ -1.69
SDCBP-213ENST00000630925 HSFX1Q9UBD0 423 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 PSORS1C1Q9UIG5 152 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 EMCNQ9ULC0 261 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 ABT1Q9ULW3 272 aaKnown RBP4.49□□□□□ -1.69
SDCBP-213ENST00000630925 CLEC4EQ9ULY5 219 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 ST3GAL5Q9UNP4 418 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 ICKQ9UPZ9 632 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 SLC22A13Q9Y226 551 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 YIPF1Q9Y548 306 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 CNTNAP2Q9UHC6 1331 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 CRB1P82279 1406 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 FRG2CA6NGY1 282 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 SRRM3A6NNA2 597 aaPredicted RBP4.49□□□□□ -1.69
SDCBP-213ENST00000630925 ZAR1LA6NP61 321 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 E7EWF7 191 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 NPIPA7E9PJI5 369 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 AQP9O43315 295 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 SSX4O60224 188 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 HPXP02790 462 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 SERPINA5P05154 406 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 HBQ1P09105 142 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 NPIPA8P0DM63 369 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 HIBADHP31937 336 aaKnown RBP4.49□□□□□ -1.69
SDCBP-213ENST00000630925 KDELR2P33947 212 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 ACVR1BP36896 505 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 PSMD4P55036 377 aaKnown RBP4.49□□□□□ -1.69
SDCBP-213ENST00000630925 DUSP2Q05923 314 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 GABPAQ06546 454 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 SREBF2Q12772 1141 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 BNIP2Q12982 314 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 NFATC2Q13469 925 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 CRMP1Q14194 572 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 PON3Q15166 354 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 STX1AQ16623 288 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 ZSWIM7Q19AV6 140 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 DUOXA2Q1HG44 320 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 ZNF699Q32M78 642 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 TSTD2Q5T7W7 516 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 METTL21CQ5VZV1 264 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 ALS2CLQ60I27 953 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 FAM166AQ6J272 317 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 ARMCX5Q6P1M9 558 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 GDPD4Q6W3E5 623 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 C3orf62Q6ZUJ4 267 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 WFDC8Q8IUA0 241 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 LAS2Q8IYD9 372 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 MUC20Q8N307 709 aaPredicted RBP4.49□□□□□ -1.69
SDCBP-213ENST00000630925 ELMOD1Q8N336 334 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 CSNK1A1LQ8N752 337 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 PAPD5Q8NDF8 572 aaKnown RBP4.49□□□□□ -1.69
SDCBP-213ENST00000630925 OR2V1Q8NHB1 315 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 MAGEC3Q8TD91 643 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 RNF133Q8WVZ7 376 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 PIH1D2Q8WWB5 315 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 FAM3CQ92520 227 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 AP3S1Q92572 193 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 TMEM45BQ96B21 275 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 PINX1Q96BK5 328 aaKnown RBP4.49□□□□□ -1.69
SDCBP-213ENST00000630925 OMA1Q96E52 524 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 C10orf90Q96M02 699 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 FYTTD1Q96QD9 318 aaKnown RBP4.49□□□□□ -1.69
SDCBP-213ENST00000630925 TNFRSF13CQ96RJ3 184 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 ASB7Q9H672 318 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 IL1RL2Q9HB29 575 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 CD320Q9NPF0 282 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 NXT1Q9UKK6 140 aaKnown RBP4.49□□□□□ -1.69
SDCBP-213ENST00000630925 FBXL3Q9UKT7 428 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 GMPPBQ9Y5P6 360 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 FADS3Q9Y5Q0 445 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 USP54Q70EL1 1684 aa4.49□□□□□ -1.69
SDCBP-213ENST00000630925 ZNF521Q96K83 1311 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 ATXN2Q99700 1313 aaKnown RBP4.48□□□□□ -1.69
SDCBP-213ENST00000630925 SLC5A10A0PJK1 596 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 SYCE1LA8MT33 242 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 HSPA12AO43301 675 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 XRCC2O43543 280 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 ENTPD5O75356 428 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 OR2J3O76001 311 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 AMHP03971 560 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 GAPDHP04406 335 aaKnown RBP4.48□□□□□ -1.69
SDCBP-213ENST00000630925 ERBB2P04626 1255 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 DCNP07585 359 aaKnown RBP4.48□□□□□ -1.69
SDCBP-213ENST00000630925 GLI4P10075 376 aa4.48□□□□□ -1.69
SDCBP-213ENST00000630925 HOXB9P17482 250 aaPredicted RBP4.48□□□□□ -1.69
SDCBP-213ENST00000630925 RAB6AP20340 208 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms