RNA–Protein interactions for RNA: ENST00000627587.2

PDLIM5-223, Transcript of PDZ and LIM domain 5, human

TSL 2

Gene PDLIM5, Length 1,853 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PDLIM5-223	ENST00000627587	SSTR4	P31391	388 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	DCT	P40126	519 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	KCNJ5	P48544	419 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	EMD	P50402	254 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	RHAG	Q02094	409 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	TLE1	Q04724	770 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	GK3P	Q14409	553 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	MINDY4	Q4G0A6	757 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	VWA2	Q5GFL6	755 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	C6orf52	Q5T4I8	152 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	OR2T5	Q6IEZ7	315 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	QSOX2	Q6ZRP7	698 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	LAPTM4B	Q86VI4	370 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	BPHL	Q86WA6	291 aa	Predicted RBP	8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	PPP1R3B	Q86XI6	285 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	SVOPL	Q8N434	492 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	OR2T29	Q8NH02	315 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	PROX1	Q92786	737 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	TSLP	Q969D9	159 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	KIAA1143	Q96AT1	154 aa	Predicted RBP	8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	PTCHD1	Q96NR3	888 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	TRNT1	Q96Q11	434 aa	Known RBP	8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	MFRP	Q9BY79	579 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	AMBRA1	Q9C0C7	1298 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	PIGU	Q9H490	435 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	MKKS	Q9NPJ1	570 aa	Predicted RBP	8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	FBXO34	Q9NWN3	711 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	GIN1	Q9NXP7	522 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	RAB26	Q9ULW5	256 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	SH3GLB1	Q9Y371	365 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	PCDHGB3	Q9Y5G1	929 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587		U3KQV3	271 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	UBR5	O95071	2799 aa	Predicted RBP	8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	NAV2	Q8IVL1	2488 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	CENPVL1	A0A0U1RR11	272 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587		A8MVJ9	347 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587		J3KTA2	159 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	RAD1	O60671	282 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	DPM1	O60762	260 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	SOX30	O94993	753 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	ALPL	P05186	524 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	FES	P07332	822 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	RPSA	P08865	295 aa	Known RBP	8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	ALOX5	P09917	674 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	WT1	P19544	449 aa	Predicted RBP	8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	GALNS	P34059	522 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	ARHGDIA	P52565	204 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	PPP2R2B	Q00005	443 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	PSG6	Q00889	435 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	CHRNE	Q04844	493 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	LAPTM4A	Q15012	233 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	CRTC2	Q53ET0	693 aa	Predicted RBP	8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	OTUD3	Q5T2D3	398 aa	Predicted RBP	8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	MLIP	Q5VWP3	458 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	FRRS1	Q6ZNA5	592 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	STK32C	Q86UX6	486 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	TSPYL5	Q86VY4	417 aa	Predicted RBP	8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	LACC1	Q8IV20	430 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	AMER2	Q8N7J2	671 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	OR52R1	Q8NGF1	315 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	OR5K1	Q8NHB7	308 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	PMEPA1	Q969W9	287 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	CLIP3	Q96DZ5	547 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	ZNF347	Q96SE7	839 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	STAC	Q99469	402 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	DUSP22	Q9NRW4	184 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	CTSF	Q9UBX1	484 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	AP4B1	Q9Y6B7	739 aa		8.81	□□□□□ -1
PDLIM5-223	ENST00000627587	IGLV3-12	A0A075B6K2	115 aa		8.8	□□□□□ -1
PDLIM5-223	ENST00000627587	C2orf72	A6NCS6	295 aa		8.8	□□□□□ -1
PDLIM5-223	ENST00000627587	EFCAB7	A8K855	629 aa		8.8	□□□□□ -1
PDLIM5-223	ENST00000627587	FFAR1	O14842	300 aa		8.8	□□□□□ -1
PDLIM5-223	ENST00000627587	ADAMDEC1	O15204	470 aa		8.8	□□□□□ -1
PDLIM5-223	ENST00000627587	DENR	O43583	198 aa	Known RBP	8.8	□□□□□ -1
PDLIM5-223	ENST00000627587	DYRK3	O43781	588 aa		8.8	□□□□□ -1
PDLIM5-223	ENST00000627587	PRAMEF2	O60811	474 aa		8.8	□□□□□ -1
PDLIM5-223	ENST00000627587	AK1	P00568	194 aa		8.8	□□□□□ -1
PDLIM5-223	ENST00000627587	IFNW1	P05000	195 aa		8.8	□□□□□ -1
PDLIM5-223	ENST00000627587	TNNI3	P19429	210 aa		8.8	□□□□□ -1
PDLIM5-223	ENST00000627587	PRKACG	P22612	351 aa		8.8	□□□□□ -1
PDLIM5-223	ENST00000627587	RORA	P35398	523 aa		8.8	□□□□□ -1
PDLIM5-223	ENST00000627587	CASR	P41180	1078 aa		8.8	□□□□□ -1
PDLIM5-223	ENST00000627587	PGD	P52209	483 aa		8.8	□□□□□ -1
PDLIM5-223	ENST00000627587	MC2R	Q01718	297 aa		8.8	□□□□□ -1
PDLIM5-223	ENST00000627587	FUT7	Q11130	342 aa		8.8	□□□□□ -1
PDLIM5-223	ENST00000627587	ZNF155	Q12901	538 aa	Predicted RBP	8.8	□□□□□ -1
PDLIM5-223	ENST00000627587	MED21	Q13503	144 aa		8.8	□□□□□ -1
PDLIM5-223	ENST00000627587	ZNF267	Q14586	743 aa	Predicted RBP	8.8	□□□□□ -1
PDLIM5-223	ENST00000627587	IL11RA	Q14626	422 aa		8.8	□□□□□ -1
PDLIM5-223	ENST00000627587	ZNHIT3	Q15649	155 aa	Predicted RBP	8.8	□□□□□ -1
PDLIM5-223	ENST00000627587	ARHGAP11B	Q3KRB8	267 aa		8.8	□□□□□ -1
PDLIM5-223	ENST00000627587	CCNJ	Q5T5M9	372 aa		8.8	□□□□□ -1
PDLIM5-223	ENST00000627587	AP1AR	Q63HQ0	302 aa		8.8	□□□□□ -1
PDLIM5-223	ENST00000627587	TYW3	Q6IPR3	259 aa	Known RBP	8.8	□□□□□ -1
PDLIM5-223	ENST00000627587	LCN10	Q6JVE6	187 aa		8.8	□□□□□ -1
PDLIM5-223	ENST00000627587	HIPK1	Q86Z02	1210 aa		8.8	□□□□□ -1
PDLIM5-223	ENST00000627587	RBM45	Q8IUH3	476 aa	Known RBP	8.8	□□□□□ -1
PDLIM5-223	ENST00000627587	ZNF321P	Q8N8H1	164 aa		8.8	□□□□□ -1
PDLIM5-223	ENST00000627587	ZNF615	Q8N8J6	731 aa		8.8	□□□□□ -1
PDLIM5-223	ENST00000627587	COX18	Q8N8Q8	333 aa		8.8	□□□□□ -1

Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms