RNA–Protein interactions for RNA: ENST00000625244.2

SNX1-214, Transcript of sorting nexin 1, humanhuman

TSL 5 BASIC

Gene SNX1, Length 324 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-214ENST00000625244 NOA1Q8NC60 698 aaKnown RBP12.3□□□□□ -0.44
SNX1-214ENST00000625244 OR52B6Q8NGF0 335 aa12.3□□□□□ -0.44
SNX1-214ENST00000625244 FAM216AQ8WUB2 273 aa12.3□□□□□ -0.44
SNX1-214ENST00000625244 KISS1RQ969F8 398 aaPredicted RBP12.3□□□□□ -0.44
SNX1-214ENST00000625244 PIMREGQ9BSJ6 248 aa12.3□□□□□ -0.44
SNX1-214ENST00000625244 WDR41Q9HAD4 459 aa12.3□□□□□ -0.44
SNX1-214ENST00000625244 ZBTB26Q9HCK0 441 aa12.3□□□□□ -0.44
SNX1-214ENST00000625244 NPAP1Q9NZP6 1156 aa12.3□□□□□ -0.44
SNX1-214ENST00000625244 MED11Q9P086 117 aa12.3□□□□□ -0.44
SNX1-214ENST00000625244 PPP4R1LQ9P1A2 415 aa12.3□□□□□ -0.44
SNX1-214ENST00000625244 ARMCX1Q9P291 453 aa12.3□□□□□ -0.44
SNX1-214ENST00000625244 AP4B1Q9Y6B7 739 aa12.3□□□□□ -0.44
SNX1-214ENST00000625244 ESYT3A0FGR9 886 aa12.29□□□□□ -0.44
SNX1-214ENST00000625244 SHISA8B8ZZ34 492 aa12.29□□□□□ -0.44
SNX1-214ENST00000625244 EIF3HO15372 352 aaKnown RBP eCLIP12.29□□□□□ -0.44
SNX1-214ENST00000625244 TSPAN2O60636 221 aa12.29□□□□□ -0.44
SNX1-214ENST00000625244 STK16O75716 305 aa12.29□□□□□ -0.44
SNX1-214ENST00000625244 CBX7O95931 251 aa12.29□□□□□ -0.44
SNX1-214ENST00000625244 ADAP00813 363 aa12.29□□□□□ -0.44
SNX1-214ENST00000625244 CPMP14384 443 aa12.29□□□□□ -0.44
SNX1-214ENST00000625244 BSGP35613 385 aa12.29□□□□□ -0.44
SNX1-214ENST00000625244 PDLIM4P50479 330 aa12.29□□□□□ -0.44
SNX1-214ENST00000625244 PRICKLE4Q2TBC4 344 aa12.29□□□□□ -0.44
SNX1-214ENST00000625244 AWAT1Q58HT5 328 aa12.29□□□□□ -0.44
SNX1-214ENST00000625244 SPANXN3Q5MJ09 141 aa12.29□□□□□ -0.44
SNX1-214ENST00000625244 CYP20A1Q6UW02 462 aa12.29□□□□□ -0.44
SNX1-214ENST00000625244 TREML4Q6UXN2 200 aa12.29□□□□□ -0.44
SNX1-214ENST00000625244 B3GLCTQ6Y288 498 aa12.29□□□□□ -0.44
SNX1-214ENST00000625244 GALNT7Q86SF2 657 aa12.29□□□□□ -0.44
SNX1-214ENST00000625244 EXOC3L1Q86VI1 746 aa12.29□□□□□ -0.44
SNX1-214ENST00000625244 FBXL14Q8N1E6 418 aa12.29□□□□□ -0.44
SNX1-214ENST00000625244 OR4K14Q8NGD5 310 aa12.29□□□□□ -0.44
SNX1-214ENST00000625244 OR52R1Q8NGF1 315 aa12.29□□□□□ -0.44
SNX1-214ENST00000625244 OR10D3Q8NH80 312 aa12.29□□□□□ -0.44
SNX1-214ENST00000625244 HUS1BQ8NHY5 278 aa12.29□□□□□ -0.44
SNX1-214ENST00000625244 UBE2E3Q969T4 207 aa12.29□□□□□ -0.44
SNX1-214ENST00000625244 FOXN4Q96NZ1 517 aa12.29□□□□□ -0.44
SNX1-214ENST00000625244 BRINP2Q9C0B6 783 aa12.29□□□□□ -0.44
SNX1-214ENST00000625244 TSPYL1Q9H0U9 437 aa12.29□□□□□ -0.44
SNX1-214ENST00000625244 DDX31Q9H8H2 851 aaKnown RBP12.29□□□□□ -0.44
SNX1-214ENST00000625244 CNOT10Q9H9A5 744 aaKnown RBP12.29□□□□□ -0.44
SNX1-214ENST00000625244 SMYD2Q9NRG4 433 aa12.29□□□□□ -0.44
SNX1-214ENST00000625244 GLRX2Q9NS18 164 aa12.29□□□□□ -0.44
SNX1-214ENST00000625244 ZNF639Q9UID6 485 aa12.29□□□□□ -0.44
SNX1-214ENST00000625244 CHMP2BQ9UQN3 213 aa12.29□□□□□ -0.44
SNX1-214ENST00000625244 PCDHGB1Q9Y5G3 927 aa12.29□□□□□ -0.44
SNX1-214ENST00000625244 PCNX3Q9H6A9 2034 aa12.28□□□□□ -0.44
SNX1-214ENST00000625244 SMAD9O15198 467 aaKnown RBP12.28□□□□□ -0.44
SNX1-214ENST00000625244 SCO2O43819 266 aa12.28□□□□□ -0.44
SNX1-214ENST00000625244 GBAP04062 536 aa12.28□□□□□ -0.44
SNX1-214ENST00000625244 TUBBP07437 444 aa12.28□□□□□ -0.44
SNX1-214ENST00000625244 PORP16435 677 aaPredicted RBP12.28□□□□□ -0.44
SNX1-214ENST00000625244 ZNF23P17027 643 aa12.28□□□□□ -0.44
SNX1-214ENST00000625244 SERPINB1P30740 379 aa12.28□□□□□ -0.44
SNX1-214ENST00000625244 ELK3P41970 407 aa12.28□□□□□ -0.44
SNX1-214ENST00000625244 EMDP50402 254 aa12.28□□□□□ -0.44
SNX1-214ENST00000625244 FABP6P51161 128 aa12.28□□□□□ -0.44
SNX1-214ENST00000625244 SPOCK1Q08629 439 aa12.28□□□□□ -0.44
SNX1-214ENST00000625244 MAP4K2Q12851 820 aa12.28□□□□□ -0.44
SNX1-214ENST00000625244 GANABQ14697 944 aaKnown RBP12.28□□□□□ -0.44
SNX1-214ENST00000625244 PPA1Q15181 289 aa12.28□□□□□ -0.44
SNX1-214ENST00000625244 STK11Q15831 433 aa12.28□□□□□ -0.44
SNX1-214ENST00000625244 IQCCQ4KMZ1 466 aa12.28□□□□□ -0.44
SNX1-214ENST00000625244 TEDDM1Q5T9Z0 273 aa12.28□□□□□ -0.44
SNX1-214ENST00000625244 Q6ZSR9 355 aa12.28□□□□□ -0.44
SNX1-214ENST00000625244 LARP4Q71RC2 724 aaKnown RBP eCLIP12.28□□□□□ -0.44
SNX1-214ENST00000625244 BHLHA15Q7RTS1 189 aaPredicted RBP12.28□□□□□ -0.44
SNX1-214ENST00000625244 NUFIP2Q7Z417 695 aaKnown RBP12.28□□□□□ -0.44
SNX1-214ENST00000625244 GALNT10Q86SR1 603 aa12.28□□□□□ -0.44
SNX1-214ENST00000625244 IFT20Q8IY31 132 aa12.28□□□□□ -0.44
SNX1-214ENST00000625244 ZBED8Q8IZ13 594 aa12.28□□□□□ -0.44
SNX1-214ENST00000625244 TCAIMQ8N3R3 496 aa12.28□□□□□ -0.44
SNX1-214ENST00000625244 LRRC17Q8N6Y2 441 aa12.28□□□□□ -0.44
SNX1-214ENST00000625244 PYROXD1Q8WU10 500 aa12.28□□□□□ -0.44
SNX1-214ENST00000625244 IFT81Q8WYA0 676 aa12.28□□□□□ -0.44
SNX1-214ENST00000625244 CFAP36Q96G28 342 aa12.28□□□□□ -0.44
SNX1-214ENST00000625244 ADGRG7Q96K78 797 aa12.28□□□□□ -0.44
SNX1-214ENST00000625244 MTERF1Q99551 399 aaKnown RBP12.28□□□□□ -0.44
SNX1-214ENST00000625244 CENPKQ9BS16 269 aa12.28□□□□□ -0.44
SNX1-214ENST00000625244 METTL17Q9H7H0 456 aaPredicted RBP12.28□□□□□ -0.44
SNX1-214ENST00000625244 PPANQ9NQ55 473 aaKnown RBP12.28□□□□□ -0.44
SNX1-214ENST00000625244 GRHL1Q9NZI5 618 aa12.28□□□□□ -0.44
SNX1-214ENST00000625244 MAT2BQ9NZL9 334 aa12.28□□□□□ -0.44
SNX1-214ENST00000625244 MCTS1Q9ULC4 181 aaKnown RBP12.28□□□□□ -0.44
SNX1-214ENST00000625244 GPR55Q9Y2T6 319 aaPredicted RBP12.28□□□□□ -0.44
SNX1-214ENST00000625244 GOLGA8QA0A0J9YX86 632 aa12.27□□□□□ -0.45
SNX1-214ENST00000625244 LRP5LA4QPB2 252 aa12.27□□□□□ -0.45
SNX1-214ENST00000625244 GOLGA8OA6NCC3 632 aa12.27□□□□□ -0.45
SNX1-214ENST00000625244 GOLGA8NF8WBI6 632 aa12.27□□□□□ -0.45
SNX1-214ENST00000625244 GOLGA8RI6L899 631 aa12.27□□□□□ -0.45
SNX1-214ENST00000625244 NDUFS8O00217 210 aa12.27□□□□□ -0.45
SNX1-214ENST00000625244 CXCL13O43927 109 aa12.27□□□□□ -0.45
SNX1-214ENST00000625244 CCNT2O60583 730 aaKnown RBP12.27□□□□□ -0.45
SNX1-214ENST00000625244 NME6O75414 186 aaPredicted RBP12.27□□□□□ -0.45
SNX1-214ENST00000625244 OPN1LWP04000 364 aa12.27□□□□□ -0.45
SNX1-214ENST00000625244 LGALS3BPQ08380 585 aa12.27□□□□□ -0.45
SNX1-214ENST00000625244 STX5Q13190 355 aa12.27□□□□□ -0.45
SNX1-214ENST00000625244 EFR3AQ14156 821 aa12.27□□□□□ -0.45
SNX1-214ENST00000625244 TRMT12Q53H54 448 aaKnown RBP12.27□□□□□ -0.45
SNX1-214ENST00000625244 HP1BP3Q5SSJ5 553 aaPredicted RBP12.27□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms