RNA–Protein interactions for RNA: ENST00000619079.1

UPF3A-212, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-212ENST00000619079 ACSL4O60488 711 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 APOC1P02654 83 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 SYPP08247 313 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 ADRB1P08588 477 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 RPL17P18621 184 aaKnown RBP10.16□□□□□ -0.78
UPF3A-212ENST00000619079 CD22P20273 847 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 SOAT1P35610 550 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 SOX18P35713 384 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 SRP9P49458 86 aaKnown RBP10.16□□□□□ -0.78
UPF3A-212ENST00000619079 SELENOPP49908 381 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 PDE7AQ13946 482 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 ZSWIM7Q19AV6 140 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 CTXN3Q4LDR2 81 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 MPPE1Q53F39 396 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 ZNF385BQ569K4 471 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 ACSM5Q6NUN0 579 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 SLC27A4Q6P1M0 643 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 DEF8Q6ZN54 512 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 PDZD9Q8IXQ8 264 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 CBARPQ8N350 705 aaPredicted RBP10.16□□□□□ -0.78
UPF3A-212ENST00000619079 SPICQ8N5J4 248 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 ST8SIA2Q92186 375 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 YIPF5Q969M3 257 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 ZNF354BQ96LW1 612 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 C12orf57Q99622 126 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 IFT27Q9BW83 186 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 SAP130Q9H0E3 1048 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 CDCP1Q9H5V8 836 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 SGK2Q9HBY8 427 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 A4GALTQ9NPC4 353 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 MARK1Q9P0L2 795 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 ZFR2Q9UPR6 939 aaKnown RBP10.16□□□□□ -0.78
UPF3A-212ENST00000619079 KCNK7Q9Y2U2 307 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 NOSIPQ9Y314 301 aaKnown RBP10.16□□□□□ -0.78
UPF3A-212ENST00000619079 A0A1B0GUH1 482 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 ARHGEF33A8MVX0 844 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 LRRN3E7EW58 273 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 PRR23D1E9PI22 279 aaPredicted RBP10.16□□□□□ -0.78
UPF3A-212ENST00000619079 F8W036 122 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 H7C4K7 107 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 DNASE2O00115 360 aaPredicted RBP10.16□□□□□ -0.78
UPF3A-212ENST00000619079 PRAMEF12O95522 483 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 ALDOBP05062 364 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 FCER2P06734 321 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 LPLP06858 475 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 ALPIP09923 528 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 PRR23D2P0DMB1 279 aaPredicted RBP10.16□□□□□ -0.78
UPF3A-212ENST00000619079 CCR7P32248 378 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 RNF144AP50876 292 aaPredicted RBP10.16□□□□□ -0.78
UPF3A-212ENST00000619079 PFN3P60673 137 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 SNTB2Q13425 540 aaKnown RBP10.16□□□□□ -0.78
UPF3A-212ENST00000619079 DOC2AQ14183 400 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 PABPC1L2AQ5JQF8 200 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 ENTPD8Q5MY95 495 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 EOGTQ5NDL2 527 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 FAM69AQ5T7M9 428 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 CDC73Q6P1J9 531 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 MRGPREQ86SM8 312 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 LHFPL3Q86UP9 236 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 MCATQ8IVS2 390 aaKnown RBP10.16□□□□□ -0.78
UPF3A-212ENST00000619079 ZNF687Q8N1G0 1237 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 FAM71CQ8NEG0 241 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 BEST4Q8NFU0 473 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 MRPL38Q96DV4 380 aaKnown RBP10.16□□□□□ -0.78
UPF3A-212ENST00000619079 YIPF4Q9BSR8 244 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 TEX12Q9BXU0 123 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 LMAN2LQ9H0V9 348 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 C20orf85Q9H1P6 137 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 LRRN3Q9H3W5 708 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 FANCFQ9NPI8 374 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 ZDHHC3Q9NYG2 299 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 NDRG3Q9UGV2 375 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 XIRP2A4UGR9 3374 aa10.16□□□□□ -0.78
UPF3A-212ENST00000619079 KIAA1671Q9BY89 1806 aa10.15□□□□□ -0.78
UPF3A-212ENST00000619079 HIDE1A8MVS5 230 aa10.15□□□□□ -0.78
UPF3A-212ENST00000619079 D6RAR5 112 aa10.15□□□□□ -0.78
UPF3A-212ENST00000619079 H7C2Y5 167 aa10.15□□□□□ -0.78
UPF3A-212ENST00000619079 GFYI3L273 518 aa10.15□□□□□ -0.78
UPF3A-212ENST00000619079 SELENOFO60613 162 aa10.15□□□□□ -0.78
UPF3A-212ENST00000619079 FZD7O75084 574 aa10.15□□□□□ -0.78
UPF3A-212ENST00000619079 FURINP09958 794 aa10.15□□□□□ -0.78
UPF3A-212ENST00000619079 OR4Q2P0C623 313 aa10.15□□□□□ -0.78
UPF3A-212ENST00000619079 OR12D1P0DN82 309 aa10.15□□□□□ -0.78
UPF3A-212ENST00000619079 CPN1P15169 458 aa10.15□□□□□ -0.78
UPF3A-212ENST00000619079 CD53P19397 219 aa10.15□□□□□ -0.78
UPF3A-212ENST00000619079 UQCRC2P22695 453 aa10.15□□□□□ -0.78
UPF3A-212ENST00000619079 CDH11P55287 796 aa10.15□□□□□ -0.78
UPF3A-212ENST00000619079 MAZP56270 477 aaKnown RBP10.15□□□□□ -0.78
UPF3A-212ENST00000619079 AP1S1P61966 158 aa10.15□□□□□ -0.78
UPF3A-212ENST00000619079 FGL1Q08830 312 aa10.15□□□□□ -0.78
UPF3A-212ENST00000619079 SF1Q15637 639 aaKnown RBP10.15□□□□□ -0.78
UPF3A-212ENST00000619079 CHRNA6Q15825 494 aa10.15□□□□□ -0.78
UPF3A-212ENST00000619079 HIST2H2AA3Q6FI13 130 aa10.15□□□□□ -0.78
UPF3A-212ENST00000619079 SFXN4Q6P4A7 337 aa10.15□□□□□ -0.78
UPF3A-212ENST00000619079 C17orf107Q6ZR85 190 aa10.15□□□□□ -0.78
UPF3A-212ENST00000619079 CHST9Q7L1S5 443 aa10.15□□□□□ -0.78
UPF3A-212ENST00000619079 DGLUCYQ7Z3D6 616 aa10.15□□□□□ -0.78
UPF3A-212ENST00000619079 MRPL43Q8N983 215 aaKnown RBP10.15□□□□□ -0.78
UPF3A-212ENST00000619079 ZNF527Q8NB42 609 aa10.15□□□□□ -0.78
UPF3A-212ENST00000619079 GPR156Q8NFN8 814 aa10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms