RNA–Protein interactions for RNA: ENST00000619035.4

TNFAIP3-209, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-209ENST00000619035 PARP8Q8N3A8 854 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 AQP11Q8NBQ7 271 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 SETD9Q8NE22 299 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 OR13F1Q8NGS4 319 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 TSLPQ969D9 159 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 CNDP2Q96KP4 475 aaKnown RBP11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 STACQ99469 402 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 APOL4Q9BPW4 351 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 PRR14Q9BWN1 585 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 FOLH1BQ9HBA9 442 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 LANCL2Q9NS86 450 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 KCND3Q9UK17 655 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 RNF6Q9Y252 685 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 DTX4Q9Y2E6 619 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 GPR55Q9Y2T6 319 aaPredicted RBP11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 WDR87Q6ZQQ6 2873 aa11.81□□□□□ -0.52
TNFAIP3-209ENST00000619035 ADAMTS20P59510 1910 aa11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 A0A1W2PPW3 197 aa11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 A8MUA0 341 aa11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 H1F0P07305 194 aaKnown RBP11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 GALNSP34059 522 aa11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 LIMS1P48059 325 aa11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 IDH2P48735 452 aaKnown RBP11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 POU6F2P78424 691 aaPredicted RBP11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 HOXC5Q00444 222 aa11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 ACY1Q03154 408 aa11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 SEC23BQ15437 767 aa11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 PROX2Q3B8N5 592 aa11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 ARHGAP22Q7Z5H3 698 aa11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 TSPYL5Q86VY4 417 aaPredicted RBP11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 CLIP4Q8N3C7 705 aa11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 FAM81AQ8TBF8 368 aa11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 ATOH1Q92858 354 aaPredicted RBP11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 ZNF578Q96N58 590 aaPredicted RBP11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 OR1F2PQ96R84 312 aa11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 PELOQ9BRX2 385 aaKnown RBP11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 GABARAPL3Q9BY60 117 aa11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 ZNF350Q9GZX5 532 aa11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 MTHFD2LQ9H903 347 aaPredicted RBP11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 ZNF556Q9HAH1 456 aa11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 BLOC1S6Q9UL45 172 aa11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 TMCC3Q9ULS5 477 aa11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 ZNF443Q9Y2A4 671 aaPredicted RBP11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 SYNDIG1LA6NDD5 238 aa11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 C17orf105B2RV13 164 aa11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 PEX12O00623 359 aa11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 FAM20BO75063 409 aa11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 IGFBP1P08833 259 aaPredicted RBP11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 ANXA8P13928 327 aa11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 PCMT1P22061 227 aa11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 DCKP27707 260 aa11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 EMDP50402 254 aa11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 GABARAPL2P60520 117 aa11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 EMX1Q04741 257 aaPredicted RBP11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 SERTAD2Q14140 314 aa11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 NPTX1Q15818 432 aa11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 GTF2IRD2BQ6EKJ0 949 aa11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 CCDC81Q6ZN84 652 aa11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 SHISA6Q6ZSJ9 500 aa11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 GTF2IRD2Q86UP8 949 aa11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 ZNF540Q8NDQ6 660 aa11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 HRASLS5Q96KN8 279 aa11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 GFM1Q96RP9 751 aaKnown RBP11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 FNDC11Q9BVV2 318 aa11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 KLHL28Q9NXS3 571 aa11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 A4GNTQ9UNA3 340 aa11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 SATB2Q9UPW6 733 aa11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 SNX5Q9Y5X3 404 aa11.8□□□□□ -0.52
TNFAIP3-209ENST00000619035 E9PQ18 207 aa11.79□□□□□ -0.52
TNFAIP3-209ENST00000619035 KHNYNO15037 678 aaKnown RBP11.79□□□□□ -0.52
TNFAIP3-209ENST00000619035 PRAMEF2O60811 474 aa11.79□□□□□ -0.52
TNFAIP3-209ENST00000619035 SEC14L2O76054 403 aa11.79□□□□□ -0.52
TNFAIP3-209ENST00000619035 CCDC159P0C7I6 412 aa11.79□□□□□ -0.52
TNFAIP3-209ENST00000619035 JUNBP17275 347 aaPredicted RBP11.79□□□□□ -0.52
TNFAIP3-209ENST00000619035 ELAVL4P26378 380 aaKnown RBP11.79□□□□□ -0.52
TNFAIP3-209ENST00000619035 PRKAR1BP31321 381 aa11.79□□□□□ -0.52
TNFAIP3-209ENST00000619035 HMGA2P52926 109 aa11.79□□□□□ -0.52
TNFAIP3-209ENST00000619035 NUDT6P53370 316 aa11.79□□□□□ -0.52
TNFAIP3-209ENST00000619035 RGS8P57771 180 aaPredicted RBP11.79□□□□□ -0.52
TNFAIP3-209ENST00000619035 LSM11P83369 360 aaKnown RBP eCLIP11.79□□□□□ -0.52
TNFAIP3-209ENST00000619035 PSG6Q00889 435 aa11.79□□□□□ -0.52
TNFAIP3-209ENST00000619035 TOP3AQ13472 1001 aaPredicted RBP11.79□□□□□ -0.52
TNFAIP3-209ENST00000619035 LARS2Q15031 903 aaKnown RBP11.79□□□□□ -0.52
TNFAIP3-209ENST00000619035 EXOSC6Q5RKV6 272 aaKnown RBP11.79□□□□□ -0.52
TNFAIP3-209ENST00000619035 DCST1Q5T197 706 aa11.79□□□□□ -0.52
TNFAIP3-209ENST00000619035 ZNF836Q6ZNA1 936 aa11.79□□□□□ -0.52
TNFAIP3-209ENST00000619035 DBX2Q6ZNG2 339 aa11.79□□□□□ -0.52
TNFAIP3-209ENST00000619035 BPHLQ86WA6 291 aaPredicted RBP11.79□□□□□ -0.52
TNFAIP3-209ENST00000619035 ERI1Q8IV48 349 aaKnown RBP11.79□□□□□ -0.52
TNFAIP3-209ENST00000619035 CCDC103Q8IW40 242 aa11.79□□□□□ -0.52
TNFAIP3-209ENST00000619035 ZNF619Q8N2I2 560 aa11.79□□□□□ -0.52
TNFAIP3-209ENST00000619035 OR4N2Q8NGD1 307 aa11.79□□□□□ -0.52
TNFAIP3-209ENST00000619035 PITX2Q99697 317 aa11.79□□□□□ -0.52
TNFAIP3-209ENST00000619035 OR10A5Q9H207 317 aa11.79□□□□□ -0.52
TNFAIP3-209ENST00000619035 WARS2Q9UGM6 360 aaKnown RBP11.79□□□□□ -0.52
TNFAIP3-209ENST00000619035 ZNF232Q9UNY5 417 aa11.79□□□□□ -0.52
TNFAIP3-209ENST00000619035 SRPK3Q9UPE1 567 aa11.79□□□□□ -0.52
TNFAIP3-209ENST00000619035 IFT52Q9Y366 437 aa11.79□□□□□ -0.52
TNFAIP3-209ENST00000619035 HCN4Q9Y3Q4 1203 aa11.79□□□□□ -0.52
TNFAIP3-209ENST00000619035 CHST2Q9Y4C5 530 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms