RNA–Protein interactions for RNA: ENST00000613758.4

TMEM254-213, Transcript of transmembrane protein 254, humanhuman

TSL 1 (best) BASIC

Gene TMEM254, Length 2,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM254-213ENST00000613758 VPS50Q96JG6 964 aa12.73□□□□□ -0.37
TMEM254-213ENST00000613758 C9orf16Q9BUW7 83 aa12.73□□□□□ -0.37
TMEM254-213ENST00000613758 ZNF350Q9GZX5 532 aa12.73□□□□□ -0.37
TMEM254-213ENST00000613758 MTHFD2LQ9H903 347 aaPredicted RBP12.73□□□□□ -0.37
TMEM254-213ENST00000613758 RAB26Q9ULW5 256 aa12.73□□□□□ -0.37
TMEM254-213ENST00000613758 GPC6Q9Y625 555 aaPredicted RBP12.73□□□□□ -0.37
TMEM254-213ENST00000613758 AHCTF1Q8WYP5 2266 aa12.73□□□□□ -0.37
TMEM254-213ENST00000613758 FRG2CA6NGY1 282 aa12.73□□□□□ -0.37
TMEM254-213ENST00000613758 SUV39H1O43463 412 aa12.73□□□□□ -0.37
TMEM254-213ENST00000613758 DENRO43583 198 aaKnown RBP12.73□□□□□ -0.37
TMEM254-213ENST00000613758 MFN2O95140 757 aa12.73□□□□□ -0.37
TMEM254-213ENST00000613758 IGKV1D-16P01601 117 aa12.73□□□□□ -0.37
TMEM254-213ENST00000613758 RFX3P48380 749 aa12.73□□□□□ -0.37
TMEM254-213ENST00000613758 NR0B1P51843 470 aaKnown RBP12.73□□□□□ -0.37
TMEM254-213ENST00000613758 SELENOWP63302 87 aa12.73□□□□□ -0.37
TMEM254-213ENST00000613758 IL10RAQ13651 578 aa12.73□□□□□ -0.37
TMEM254-213ENST00000613758 IQCCQ4KMZ1 466 aa12.73□□□□□ -0.37
TMEM254-213ENST00000613758 TYW3Q6IPR3 259 aaKnown RBP12.73□□□□□ -0.37
TMEM254-213ENST00000613758 PACRGLQ8N7B6 248 aa12.73□□□□□ -0.37
TMEM254-213ENST00000613758 BCORP1Q8N888 145 aa12.73□□□□□ -0.37
TMEM254-213ENST00000613758 ZNF441Q8N8Z8 693 aa12.73□□□□□ -0.37
TMEM254-213ENST00000613758 OR8K3Q8NH51 312 aa12.73□□□□□ -0.37
TMEM254-213ENST00000613758 M1APQ8TC57 530 aa12.73□□□□□ -0.37
TMEM254-213ENST00000613758 TMBIM1Q969X1 311 aa12.73□□□□□ -0.37
TMEM254-213ENST00000613758 ZG16BQ96DA0 208 aa12.73□□□□□ -0.37
TMEM254-213ENST00000613758 NXPE2Q96DL1 559 aa12.73□□□□□ -0.37
TMEM254-213ENST00000613758 TPD52L3Q96J77 140 aa12.73□□□□□ -0.37
TMEM254-213ENST00000613758 HSH2DQ96JZ2 352 aa12.73□□□□□ -0.37
TMEM254-213ENST00000613758 VCXQ9H320 206 aa12.73□□□□□ -0.37
TMEM254-213ENST00000613758 WDR70Q9NW82 654 aa12.73□□□□□ -0.37
TMEM254-213ENST00000613758 DNAJB9Q9UBS3 223 aa12.73□□□□□ -0.37
TMEM254-213ENST00000613758 AP4B1Q9Y6B7 739 aa12.73□□□□□ -0.37
TMEM254-213ENST00000613758 CDC14CA4D256 554 aa12.72□□□□□ -0.37
TMEM254-213ENST00000613758 ZFAND5O76080 213 aa12.72□□□□□ -0.37
TMEM254-213ENST00000613758 RASAL1O95294 804 aa12.72□□□□□ -0.37
TMEM254-213ENST00000613758 CST1P01037 141 aa12.72□□□□□ -0.37
TMEM254-213ENST00000613758 HOXB6P17509 224 aaKnown RBP12.72□□□□□ -0.37
TMEM254-213ENST00000613758 PUM1Q14671 1186 aaKnown RBP eCLIP12.72□□□□□ -0.37
TMEM254-213ENST00000613758 GPR68Q15743 365 aa12.72□□□□□ -0.37
TMEM254-213ENST00000613758 PLAG1Q6DJT9 500 aa12.72□□□□□ -0.37
TMEM254-213ENST00000613758 FKBP9P1Q75LS8 142 aa12.72□□□□□ -0.37
TMEM254-213ENST00000613758 HMGN2P46Q86SG4 172 aa12.72□□□□□ -0.37
TMEM254-213ENST00000613758 RAB43Q86YS6 212 aa12.72□□□□□ -0.37
TMEM254-213ENST00000613758 ARMC8Q8IUR7 673 aa12.72□□□□□ -0.37
TMEM254-213ENST00000613758 SMYD1Q8NB12 490 aa12.72□□□□□ -0.37
TMEM254-213ENST00000613758 C17orf47Q8NEP4 570 aa12.72□□□□□ -0.37
TMEM254-213ENST00000613758 OR5L2Q8NGL0 311 aa12.72□□□□□ -0.37
TMEM254-213ENST00000613758 ELP5Q8TE02 316 aa12.72□□□□□ -0.37
TMEM254-213ENST00000613758 TP53INP1Q96A56 240 aa12.72□□□□□ -0.37
TMEM254-213ENST00000613758 SPATA5L1Q9BVQ7 753 aa12.72□□□□□ -0.37
TMEM254-213ENST00000613758 SAP130Q9H0E3 1048 aa12.72□□□□□ -0.37
TMEM254-213ENST00000613758 LIN28AQ9H9Z2 209 aaKnown RBP12.72□□□□□ -0.37
TMEM254-213ENST00000613758 ZNF160Q9HCG1 818 aa12.72□□□□□ -0.37
TMEM254-213ENST00000613758 IL1RAPQ9NPH3 570 aa12.72□□□□□ -0.37
TMEM254-213ENST00000613758 POLE3Q9NRF9 147 aa12.72□□□□□ -0.37
TMEM254-213ENST00000613758 DSPPQ9NZW4 1301 aa12.72□□□□□ -0.37
TMEM254-213ENST00000613758 TO15178 435 aa12.71□□□□□ -0.37
TMEM254-213ENST00000613758 ALPPP05187 535 aa12.71□□□□□ -0.37
TMEM254-213ENST00000613758 SPINK2P20155 84 aa12.71□□□□□ -0.37
TMEM254-213ENST00000613758 IST1P53990 364 aa12.71□□□□□ -0.37
TMEM254-213ENST00000613758 KCNJ10P78508 379 aa12.71□□□□□ -0.37
TMEM254-213ENST00000613758 VLDLRP98155 873 aa12.71□□□□□ -0.37
TMEM254-213ENST00000613758 C6orf52Q5T4I8 152 aa12.71□□□□□ -0.37
TMEM254-213ENST00000613758 AP1ARQ63HQ0 302 aa12.71□□□□□ -0.37
TMEM254-213ENST00000613758 ZDHHC21Q8IVQ6 265 aa12.71□□□□□ -0.37
TMEM254-213ENST00000613758 ZNF619Q8N2I2 560 aa12.71□□□□□ -0.37
TMEM254-213ENST00000613758 NUBPLQ8TB37 319 aa12.71□□□□□ -0.37
TMEM254-213ENST00000613758 THAP3Q8WTV1 239 aaPredicted RBP12.71□□□□□ -0.37
TMEM254-213ENST00000613758 LZICQ8WZA0 190 aa12.71□□□□□ -0.37
TMEM254-213ENST00000613758 GATA6Q92908 595 aa12.71□□□□□ -0.37
TMEM254-213ENST00000613758 LMF1Q96S06 567 aa12.71□□□□□ -0.37
TMEM254-213ENST00000613758 DOHHQ9BU89 302 aa12.71□□□□□ -0.37
TMEM254-213ENST00000613758 G6PC3Q9BUM1 346 aa12.71□□□□□ -0.37
TMEM254-213ENST00000613758 SCNM1Q9BWG6 230 aa12.71□□□□□ -0.37
TMEM254-213ENST00000613758 DEFB126Q9BYW3 111 aa12.71□□□□□ -0.37
TMEM254-213ENST00000613758 QRSL1Q9H0R6 528 aaKnown RBP12.71□□□□□ -0.37
TMEM254-213ENST00000613758 P4HTMQ9NXG6 502 aa12.71□□□□□ -0.37
TMEM254-213ENST00000613758 SEC14L3Q9UDX4 400 aa12.71□□□□□ -0.37
TMEM254-213ENST00000613758 FBXL4Q9UKA2 621 aa12.71□□□□□ -0.37
TMEM254-213ENST00000613758 EI24O14681 340 aa12.71□□□□□ -0.37
TMEM254-213ENST00000613758 HPP00738 406 aa12.71□□□□□ -0.37
TMEM254-213ENST00000613758 GUSBP08236 651 aa12.71□□□□□ -0.37
TMEM254-213ENST00000613758 LIFP15018 202 aa12.71□□□□□ -0.37
TMEM254-213ENST00000613758 HSPA13P48723 471 aa12.71□□□□□ -0.37
TMEM254-213ENST00000613758 MED21Q13503 144 aa12.71□□□□□ -0.37
TMEM254-213ENST00000613758 DECR1Q16698 335 aa12.71□□□□□ -0.37
TMEM254-213ENST00000613758 DUSP7Q16829 419 aa12.71□□□□□ -0.37
TMEM254-213ENST00000613758 TBC1D25Q3MII6 688 aa12.71□□□□□ -0.37
TMEM254-213ENST00000613758 NHSL2Q5HYW2 709 aa12.71□□□□□ -0.37
TMEM254-213ENST00000613758 TSEN54Q7Z6J9 526 aaKnown RBP12.71□□□□□ -0.37
TMEM254-213ENST00000613758 TMEM179BQ7Z7N9 219 aa12.71□□□□□ -0.37
TMEM254-213ENST00000613758 ZAR1Q86SH2 424 aa12.71□□□□□ -0.37
TMEM254-213ENST00000613758 MRGPREQ86SM8 312 aa12.71□□□□□ -0.37
TMEM254-213ENST00000613758 MARVELD2Q8N4S9 558 aa12.71□□□□□ -0.37
TMEM254-213ENST00000613758 SPPL2AQ8TCT8 520 aa12.71□□□□□ -0.37
TMEM254-213ENST00000613758 PMM1Q92871 262 aa12.71□□□□□ -0.37
TMEM254-213ENST00000613758 HSPBAP1Q96EW2 488 aa12.71□□□□□ -0.37
TMEM254-213ENST00000613758 C7orf34Q96L11 122 aa12.71□□□□□ -0.37
TMEM254-213ENST00000613758 RSPO3Q9BXY4 272 aaPredicted RBP12.71□□□□□ -0.37
TMEM254-213ENST00000613758 MMP25Q9NPA2 562 aa12.71□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms