RNA–Protein interactions for RNA: ENST00000612369.4

VCX3A-203, Transcript of variable charge X-linked 3A, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3A, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3A-203ENST00000612369 OPRM1P35372 400 aa16.52■□□□□ 0.24
VCX3A-203ENST00000612369 SERPINB4P48594 390 aa16.52■□□□□ 0.24
VCX3A-203ENST00000612369 ZNF136P52737 540 aa16.52■□□□□ 0.24
VCX3A-203ENST00000612369 PRR5P85299 388 aa16.52■□□□□ 0.24
VCX3A-203ENST00000612369 MAD2L1Q13257 205 aaPredicted RBP16.52■□□□□ 0.24
VCX3A-203ENST00000612369 C6orf136Q5SQH8 315 aa16.52■□□□□ 0.24
VCX3A-203ENST00000612369 POMZP3Q6PJE2 187 aa16.52■□□□□ 0.24
VCX3A-203ENST00000612369 ARSKQ6UWY0 536 aa16.52■□□□□ 0.24
VCX3A-203ENST00000612369 ADGRE4PQ86SQ3 457 aa16.52■□□□□ 0.24
VCX3A-203ENST00000612369 RELL2Q8NC24 303 aaPredicted RBP16.52■□□□□ 0.24
VCX3A-203ENST00000612369 OR2M3Q8NG83 312 aa16.52■□□□□ 0.24
VCX3A-203ENST00000612369 PPP1R14CQ8TAE6 165 aa16.52■□□□□ 0.24
VCX3A-203ENST00000612369 GPR151Q8TDV0 419 aa16.52■□□□□ 0.24
VCX3A-203ENST00000612369 MS4A4EQ96PG1 132 aa16.52■□□□□ 0.24
VCX3A-203ENST00000612369 TM9SF2Q99805 663 aa16.52■□□□□ 0.24
VCX3A-203ENST00000612369 DSN1Q9H410 356 aa16.52■□□□□ 0.24
VCX3A-203ENST00000612369 ATAD3AQ9NVI7 634 aa16.52■□□□□ 0.24
VCX3A-203ENST00000612369 CSMD2Q7Z408 3487 aa16.51■□□□□ 0.23
VCX3A-203ENST00000612369 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.51■□□□□ 0.23
VCX3A-203ENST00000612369 TM9SF1O15321 606 aa16.51■□□□□ 0.23
VCX3A-203ENST00000612369 PEPDP12955 493 aa16.51■□□□□ 0.23
VCX3A-203ENST00000612369 ZNF708P17019 499 aa16.51■□□□□ 0.23
VCX3A-203ENST00000612369 LCN1P31025 176 aa16.51■□□□□ 0.23
VCX3A-203ENST00000612369 LHX2P50458 406 aa16.51■□□□□ 0.23
VCX3A-203ENST00000612369 PRKAG1P54619 331 aa16.51■□□□□ 0.23
VCX3A-203ENST00000612369 DLX5P56178 289 aa16.51■□□□□ 0.23
VCX3A-203ENST00000612369 WNT3P56703 355 aa16.51■□□□□ 0.23
VCX3A-203ENST00000612369 C17orf67Q0P5P2 114 aa16.51■□□□□ 0.23
VCX3A-203ENST00000612369 MYBPHQ13203 477 aa16.51■□□□□ 0.23
VCX3A-203ENST00000612369 SMU1Q2TAY7 513 aa16.51■□□□□ 0.23
VCX3A-203ENST00000612369 EXOC3L1Q86VI1 746 aa16.51■□□□□ 0.23
VCX3A-203ENST00000612369 KIRREL3Q8IZU9 778 aa16.51■□□□□ 0.23
VCX3A-203ENST00000612369 FNDC5Q8NAU1 212 aa16.51■□□□□ 0.23
VCX3A-203ENST00000612369 GOT1L1Q8NHS2 421 aaPredicted RBP16.51■□□□□ 0.23
VCX3A-203ENST00000612369 RNASE6Q93091 150 aaKnown RBP16.51■□□□□ 0.23
VCX3A-203ENST00000612369 WNT2BQ93097 391 aa16.51■□□□□ 0.23
VCX3A-203ENST00000612369 GIMAP5Q96F15 307 aa16.51■□□□□ 0.23
VCX3A-203ENST00000612369 C3orf30Q96M34 536 aa16.51■□□□□ 0.23
VCX3A-203ENST00000612369 PRPF18Q99633 342 aaKnown RBP16.51■□□□□ 0.23
VCX3A-203ENST00000612369 TUBA1CQ9BQE3 449 aa16.51■□□□□ 0.23
VCX3A-203ENST00000612369 TBL1XR1Q9BZK7 514 aa16.51■□□□□ 0.23
VCX3A-203ENST00000612369 EQTNQ9NQ60 294 aa16.51■□□□□ 0.23
VCX3A-203ENST00000612369 L3MBTL1Q9Y468 752 aa16.51■□□□□ 0.23
VCX3A-203ENST00000612369 MED12Q93074 2177 aa16.5■□□□□ 0.23
VCX3A-203ENST00000612369 A0A1W2PRB8 838 aa16.5■□□□□ 0.23
VCX3A-203ENST00000612369 GXYLT2A0PJZ3 443 aa16.5■□□□□ 0.23
VCX3A-203ENST00000612369 B4DXG7 233 aa16.5■□□□□ 0.23
VCX3A-203ENST00000612369 SOX30O94993 753 aa16.5■□□□□ 0.23
VCX3A-203ENST00000612369 UTS2O95399 124 aa16.5■□□□□ 0.23
VCX3A-203ENST00000612369 HSPA4LO95757 839 aa16.5■□□□□ 0.23
VCX3A-203ENST00000612369 SERPINE1P05121 402 aa16.5■□□□□ 0.23
VCX3A-203ENST00000612369 PRPS1L1P21108 318 aa16.5■□□□□ 0.23
VCX3A-203ENST00000612369 RFX3P48380 749 aa16.5■□□□□ 0.23
VCX3A-203ENST00000612369 PRIM2P49643 509 aa16.5■□□□□ 0.23
VCX3A-203ENST00000612369 STARP49675 285 aa16.5■□□□□ 0.23
VCX3A-203ENST00000612369 KRTAP10-9P60411 292 aa16.5■□□□□ 0.23
VCX3A-203ENST00000612369 EEF1A1P68104 462 aaKnown RBP16.5■□□□□ 0.23
VCX3A-203ENST00000612369 SRYQ05066 204 aa16.5■□□□□ 0.23
VCX3A-203ENST00000612369 GLYR1Q49A26 553 aaPredicted RBP16.5■□□□□ 0.23
VCX3A-203ENST00000612369 TNFAIP8L3Q5GJ75 292 aa16.5■□□□□ 0.23
VCX3A-203ENST00000612369 CPTPQ5TA50 214 aa16.5■□□□□ 0.23
VCX3A-203ENST00000612369 EEF1A1P5Q5VTE0 462 aa16.5■□□□□ 0.23
VCX3A-203ENST00000612369 IL23RQ5VWK5 629 aa16.5■□□□□ 0.23
VCX3A-203ENST00000612369 MFSD12Q6NUT3 480 aa16.5■□□□□ 0.23
VCX3A-203ENST00000612369 SZRD1Q7Z422 152 aa16.5■□□□□ 0.23
VCX3A-203ENST00000612369 DUSP19Q8WTR2 217 aa16.5■□□□□ 0.23
VCX3A-203ENST00000612369 PIK3R3Q92569 461 aa16.5■□□□□ 0.23
VCX3A-203ENST00000612369 SLC9A6Q92581 669 aa16.5■□□□□ 0.23
VCX3A-203ENST00000612369 TUBGCP3Q96CW5 907 aa16.5■□□□□ 0.23
VCX3A-203ENST00000612369 RMND5BQ96G75 393 aaPredicted RBP16.5■□□□□ 0.23
VCX3A-203ENST00000612369 SH3GL2Q99962 352 aa16.5■□□□□ 0.23
VCX3A-203ENST00000612369 ACBD3Q9H3P7 528 aa16.5■□□□□ 0.23
VCX3A-203ENST00000612369 GIN1Q9NXP7 522 aa16.5■□□□□ 0.23
VCX3A-203ENST00000612369 FLRT3Q9NZU0 649 aa16.5■□□□□ 0.23
VCX3A-203ENST00000612369 GIMAP2Q9UG22 337 aa16.5■□□□□ 0.23
VCX3A-203ENST00000612369 EIF3LQ9Y262 564 aaKnown RBP16.5■□□□□ 0.23
VCX3A-203ENST00000612369 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.5■□□□□ 0.23
VCX3A-203ENST00000612369 ACTL7BQ9Y614 415 aa16.5■□□□□ 0.23
VCX3A-203ENST00000612369 OTOGQ6ZRI0 2925 aa16.49■□□□□ 0.23
VCX3A-203ENST00000612369 IGLV3-32A0A0A0MS00 114 aa16.49■□□□□ 0.23
VCX3A-203ENST00000612369 CLCA1A8K7I4 914 aa16.49■□□□□ 0.23
VCX3A-203ENST00000612369 ESPNB1AK53 854 aa16.49■□□□□ 0.23
VCX3A-203ENST00000612369 SKAP2O75563 359 aaPredicted RBP16.49■□□□□ 0.23
VCX3A-203ENST00000612369 RCBTB2O95199 551 aa16.49■□□□□ 0.23
VCX3A-203ENST00000612369 NGFRP08138 427 aa16.49■□□□□ 0.23
VCX3A-203ENST00000612369 ALOX5P09917 674 aa16.49■□□□□ 0.23
VCX3A-203ENST00000612369 DHRS4L1P0CG22 281 aa16.49■□□□□ 0.23
VCX3A-203ENST00000612369 TMIGD3P0DMS9 266 aaPredicted RBP16.49■□□□□ 0.23
VCX3A-203ENST00000612369 HK1P19367 917 aa16.49■□□□□ 0.23
VCX3A-203ENST00000612369 UQCRC1P31930 480 aa16.49■□□□□ 0.23
VCX3A-203ENST00000612369 DGKQP52824 942 aa16.49■□□□□ 0.23
VCX3A-203ENST00000612369 CLDN18P56856 261 aa16.49■□□□□ 0.23
VCX3A-203ENST00000612369 EEFSECP57772 596 aaKnown RBP16.49■□□□□ 0.23
VCX3A-203ENST00000612369 B3GALT5-AS1P59052 145 aa16.49■□□□□ 0.23
VCX3A-203ENST00000612369 PTGR1Q14914 329 aa16.49■□□□□ 0.23
VCX3A-203ENST00000612369 CPEB4Q17RY0 729 aaKnown RBP eCLIP16.49■□□□□ 0.23
VCX3A-203ENST00000612369 LSM12Q3MHD2 195 aaKnown RBP16.49■□□□□ 0.23
VCX3A-203ENST00000612369 EXOSC6Q5RKV6 272 aaKnown RBP16.49■□□□□ 0.23
VCX3A-203ENST00000612369 CEP85LQ5SZL2 805 aa16.49■□□□□ 0.23
VCX3A-203ENST00000612369 MARCH3Q86UD3 253 aa16.49■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms