RNA–Protein interactions for RNA: ENST00000612350.1

PTCHD3P1-201, Transcript of patched domain containing 3 pseudogene 1, humanhuman

BASIC

Gene PTCHD3P1, Length 537 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD3P1-201ENST00000612350 PTX3P26022 381 aaPredicted RBP6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 HSD3B2P26439 372 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 PTPN6P29350 595 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 ARL1P40616 181 aaPredicted RBP6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 KCNJ5P48544 419 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 KRT6CP48668 564 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 NUDT6P53370 316 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 CDH13P55290 713 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 RAB8AP61006 207 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 MAGOHP61326 146 aaKnown RBP6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 SRYQ05066 204 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 FUT7Q11130 342 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 IFT88Q13099 833 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 TRAF3Q13114 568 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 CUL3Q13618 768 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 RUNX2Q13950 521 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 RCN2Q14257 317 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 PCLAFQ15004 111 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 CPSF6Q16630 551 aaKnown RBP eCLIP6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 TBCELQ5QJ74 424 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 PRAMEF9Q5VWM5 478 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 FRG2Q64ET8 278 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 TTC19Q6DKK2 380 aaPredicted RBP6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 TRIM40Q6P9F5 258 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 SHISA2Q6UWI4 295 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 FRMD7Q6ZUT3 714 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 GPRIN3Q6ZVF9 776 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 YRDCQ86U90 279 aaKnown RBP6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 DTX2Q86UW9 622 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 MYLK4Q86YV6 388 aaPredicted RBP6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 NUDCD3Q8IVD9 361 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 C10orf107Q8IVU9 208 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 SLC15A4Q8N697 577 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 CNEP1R1Q8N9A8 125 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 OR2L5Q8NG80 312 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 OR4F6Q8NGB9 312 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 OR52B6Q8NGF0 335 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 WDR20Q8TBZ3 569 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 C10orf105Q8TEF2 133 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 TRPC4APQ8TEL6 797 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 ZNF721Q8TF20 911 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 ZNF473Q8WTR7 871 aaKnown RBP6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 FAM216AQ8WUB2 273 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 DAZLQ92904 295 aaKnown RBP6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 GAL3ST3Q96A11 431 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 FAR2Q96K12 515 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 ATP6V1G3Q96LB4 118 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 NSUN5Q96P11 429 aaKnown RBP6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 KCNC2Q96PR1 638 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 FRG2BQ96QU4 278 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 TBCDQ9BTW9 1192 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 NPLQ9BXD5 320 aaPredicted RBP6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 KLHL4Q9C0H6 718 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 OR8D2Q9GZM6 311 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 REXO4Q9GZR2 422 aaKnown RBP6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 AICDAQ9GZX7 198 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 SPNS1Q9H2V7 528 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 GSTO2Q9H4Y5 243 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 KLHL31Q9H511 634 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 ELOVL6Q9H5J4 265 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 BRF2Q9HAW0 419 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 KCNK9Q9NPC2 374 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 NKIRAS1Q9NYS0 192 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 SLC17A7Q9P2U7 560 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 HEY2Q9UBP5 337 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 VTI1BQ9UEU0 232 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 WBP11Q9Y2W2 641 aaKnown RBP6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 PCDHGB1Q9Y5G3 927 aa6.44□□□□□ -1.38
PTCHD3P1-201ENST00000612350 MYOCOSA0A1B0GUC4 107 aa6.43□□□□□ -1.38
PTCHD3P1-201ENST00000612350 A0A1W2PP18 115 aa6.43□□□□□ -1.38
PTCHD3P1-201ENST00000612350 TMEM120BA0PK00 339 aa6.43□□□□□ -1.38
PTCHD3P1-201ENST00000612350 TMEM114B3SHH9 223 aa6.43□□□□□ -1.38
PTCHD3P1-201ENST00000612350 EMC8O43402 210 aa6.43□□□□□ -1.38
PTCHD3P1-201ENST00000612350 ULK1O75385 1050 aa6.43□□□□□ -1.38
PTCHD3P1-201ENST00000612350 SEMA3DO95025 777 aa6.43□□□□□ -1.38
PTCHD3P1-201ENST00000612350 SERPIND1P05546 499 aa6.43□□□□□ -1.38
PTCHD3P1-201ENST00000612350 FGF4P08620 206 aa6.43□□□□□ -1.38
PTCHD3P1-201ENST00000612350 PCNAP12004 261 aa6.43□□□□□ -1.38
PTCHD3P1-201ENST00000612350 ALDH3A1P30838 453 aa6.43□□□□□ -1.38
PTCHD3P1-201ENST00000612350 SERPINB4P48594 390 aa6.43□□□□□ -1.38
PTCHD3P1-201ENST00000612350 STARP49675 285 aa6.43□□□□□ -1.38
PTCHD3P1-201ENST00000612350 IRX1P78414 480 aaPredicted RBP6.43□□□□□ -1.38
PTCHD3P1-201ENST00000612350 SLC13A2Q13183 592 aa6.43□□□□□ -1.38
PTCHD3P1-201ENST00000612350 NTRK2Q16620 822 aa6.43□□□□□ -1.38
PTCHD3P1-201ENST00000612350 ZNF672Q499Z4 452 aaPredicted RBP6.43□□□□□ -1.38
PTCHD3P1-201ENST00000612350 FBLN7Q53RD9 439 aa6.43□□□□□ -1.38
PTCHD3P1-201ENST00000612350 NCMAPQ5T1S8 102 aa6.43□□□□□ -1.38
PTCHD3P1-201ENST00000612350 DEPDC1Q5TB30 811 aa6.43□□□□□ -1.38
PTCHD3P1-201ENST00000612350 KHDRBS2Q5VWX1 349 aaKnown RBP6.43□□□□□ -1.38
PTCHD3P1-201ENST00000612350 BICRALQ6AI39 1079 aa6.43□□□□□ -1.38
PTCHD3P1-201ENST00000612350 LETMD1Q6P1Q0 360 aa6.43□□□□□ -1.38
PTCHD3P1-201ENST00000612350 SCIMPQ6UWF3 145 aa6.43□□□□□ -1.38
PTCHD3P1-201ENST00000612350 RNF165Q6ZSG1 346 aa6.43□□□□□ -1.38
PTCHD3P1-201ENST00000612350 VN1R5Q7Z5H4 357 aa6.43□□□□□ -1.38
PTCHD3P1-201ENST00000612350 CLNKQ7Z7G1 428 aa6.43□□□□□ -1.38
PTCHD3P1-201ENST00000612350 WFDC8Q8IUA0 241 aa6.43□□□□□ -1.38
PTCHD3P1-201ENST00000612350 GRAMD2AQ8IUY3 354 aa6.43□□□□□ -1.38
PTCHD3P1-201ENST00000612350 TRIM42Q8IWZ5 723 aa6.43□□□□□ -1.38
PTCHD3P1-201ENST00000612350 DND1Q8IYX4 353 aaKnown RBP6.43□□□□□ -1.38
PTCHD3P1-201ENST00000612350 ZNF525Q8N782 197 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms