RNA–Protein interactions for RNA: ENST00000612273.1

COL6A1-207, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL6A1, Length 3,251 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-207ENST00000612273 GTPBP1O00178 669 aaKnown RBP13.15□□□□□ -0.3
COL6A1-207ENST00000612273 MAN2B1O00754 1011 aa13.15□□□□□ -0.3
COL6A1-207ENST00000612273 HCCSP53701 268 aa13.15□□□□□ -0.3
COL6A1-207ENST00000612273 COX10Q12887 443 aa13.15□□□□□ -0.3
COL6A1-207ENST00000612273 PSRC1Q6PGN9 363 aaPredicted RBP13.15□□□□□ -0.3
COL6A1-207ENST00000612273 GDPD1Q8N9F7 314 aa13.15□□□□□ -0.3
COL6A1-207ENST00000612273 AP3S1Q92572 193 aa13.15□□□□□ -0.3
COL6A1-207ENST00000612273 PPIL3Q9H2H8 161 aaKnown RBP13.15□□□□□ -0.3
COL6A1-207ENST00000612273 SLC38A1Q9H2H9 487 aa13.15□□□□□ -0.3
COL6A1-207ENST00000612273 CCDC86Q9H6F5 360 aaKnown RBP13.15□□□□□ -0.3
COL6A1-207ENST00000612273 NKIRAS2Q9NYR9 191 aa13.15□□□□□ -0.3
COL6A1-207ENST00000612273 SF3B6Q9Y3B4 125 aaKnown RBP13.15□□□□□ -0.3
COL6A1-207ENST00000612273 TSPAN11A1L157 253 aa13.15□□□□□ -0.3
COL6A1-207ENST00000612273 H3BSH0 61 aa13.15□□□□□ -0.3
COL6A1-207ENST00000612273 FKTNO75072 461 aa13.15□□□□□ -0.3
COL6A1-207ENST00000612273 ASGR2P07307 311 aa13.15□□□□□ -0.3
COL6A1-207ENST00000612273 PRKAR1AP10644 381 aa13.15□□□□□ -0.3
COL6A1-207ENST00000612273 ACADMP11310 421 aa13.15□□□□□ -0.3
COL6A1-207ENST00000612273 ELK1P19419 428 aa13.15□□□□□ -0.3
COL6A1-207ENST00000612273 HIST1H1TP22492 207 aaPredicted RBP13.15□□□□□ -0.3
COL6A1-207ENST00000612273 RAB40BQ12829 278 aa13.15□□□□□ -0.3
COL6A1-207ENST00000612273 BCL2L15Q5TBC7 163 aa13.15□□□□□ -0.3
COL6A1-207ENST00000612273 PPP2R2DQ66LE6 453 aa13.15□□□□□ -0.3
COL6A1-207ENST00000612273 QSOX2Q6ZRP7 698 aa13.15□□□□□ -0.3
COL6A1-207ENST00000612273 CLDN22Q8N7P3 220 aa13.15□□□□□ -0.3
COL6A1-207ENST00000612273 SLC37A3Q8NCC5 494 aa13.15□□□□□ -0.3
COL6A1-207ENST00000612273 SMG7Q92540 1137 aaKnown RBP13.15□□□□□ -0.3
COL6A1-207ENST00000612273 PAWRQ96IZ0 340 aaKnown RBP13.15□□□□□ -0.3
COL6A1-207ENST00000612273 SLX1AQ9BQ83 275 aa13.15□□□□□ -0.3
COL6A1-207ENST00000612273 CDCP1Q9H5V8 836 aa13.15□□□□□ -0.3
COL6A1-207ENST00000612273 RGS13O14921 159 aa13.15□□□□□ -0.3
COL6A1-207ENST00000612273 EEF1E1O43324 174 aaKnown RBP13.15□□□□□ -0.3
COL6A1-207ENST00000612273 ADH1CP00326 375 aa13.15□□□□□ -0.3
COL6A1-207ENST00000612273 CLTBP09497 229 aa13.15□□□□□ -0.3
COL6A1-207ENST00000612273 SEC13P55735 322 aa13.15□□□□□ -0.3
COL6A1-207ENST00000612273 PRDX1Q06830 199 aaKnown RBP13.15□□□□□ -0.3
COL6A1-207ENST00000612273 C3orf38Q5JPI3 329 aa13.15□□□□□ -0.3
COL6A1-207ENST00000612273 METRNLQ641Q3 311 aa13.15□□□□□ -0.3
COL6A1-207ENST00000612273 FAM111BQ6SJ93 734 aa13.15□□□□□ -0.3
COL6A1-207ENST00000612273 NR2C2APQ86WQ0 139 aa13.15□□□□□ -0.3
COL6A1-207ENST00000612273 GRHL3Q8TE85 626 aa13.15□□□□□ -0.3
COL6A1-207ENST00000612273 DEDD2Q8WXF8 326 aa13.15□□□□□ -0.3
COL6A1-207ENST00000612273 TRIM43Q96BQ3 446 aaPredicted RBP13.15□□□□□ -0.3
COL6A1-207ENST00000612273 ORAI1Q96D31 301 aa13.15□□□□□ -0.3
COL6A1-207ENST00000612273 LRIG1Q96JA1 1093 aa13.15□□□□□ -0.3
COL6A1-207ENST00000612273 MSLNLQ96KJ4 702 aa13.15□□□□□ -0.3
COL6A1-207ENST00000612273 CAMK1GQ96NX5 476 aa13.15□□□□□ -0.3
COL6A1-207ENST00000612273 ARHGAP9Q9BRR9 750 aa13.15□□□□□ -0.3
COL6A1-207ENST00000612273 EPHX3Q9H6B9 360 aa13.15□□□□□ -0.3
COL6A1-207ENST00000612273 MRPL15Q9P015 296 aaKnown RBP13.15□□□□□ -0.3
COL6A1-207ENST00000612273 ZNF222Q9UK12 451 aa13.15□□□□□ -0.3
COL6A1-207ENST00000612273 GPR34Q9UPC5 381 aa13.15□□□□□ -0.3
COL6A1-207ENST00000612273 CA5BQ9Y2D0 317 aa13.15□□□□□ -0.3
COL6A1-207ENST00000612273 DENND4CQ5VZ89 1909 aa13.15□□□□□ -0.31
COL6A1-207ENST00000612273 C17orf113A0A1B0GUU1 675 aa13.14□□□□□ -0.31
COL6A1-207ENST00000612273 SNTNA6NMZ2 147 aa13.14□□□□□ -0.31
COL6A1-207ENST00000612273 E9PI62 339 aa13.14□□□□□ -0.31
COL6A1-207ENST00000612273 CSNK2A2P19784 350 aaPredicted RBP13.14□□□□□ -0.31
COL6A1-207ENST00000612273 ENDOUP21128 410 aaKnown RBP13.14□□□□□ -0.31
COL6A1-207ENST00000612273 GAS1P54826 345 aa13.14□□□□□ -0.31
COL6A1-207ENST00000612273 REEP5Q00765 189 aa13.14□□□□□ -0.31
COL6A1-207ENST00000612273 TRAM2Q15035 370 aa13.14□□□□□ -0.31
COL6A1-207ENST00000612273 DEFB134Q4QY38 66 aa13.14□□□□□ -0.31
COL6A1-207ENST00000612273 TJAP1Q5JTD0 557 aa13.14□□□□□ -0.31
COL6A1-207ENST00000612273 ANKRD33Q7Z3H0 272 aa13.14□□□□□ -0.31
COL6A1-207ENST00000612273 TMEM99Q8N816 258 aa13.14□□□□□ -0.31
COL6A1-207ENST00000612273 PPP1R16AQ96I34 528 aa13.14□□□□□ -0.31
COL6A1-207ENST00000612273 SPATA5L1Q9BVQ7 753 aa13.14□□□□□ -0.31
COL6A1-207ENST00000612273 WDR26Q9H7D7 661 aa13.14□□□□□ -0.31
COL6A1-207ENST00000612273 FBXO34Q9NWN3 711 aa13.14□□□□□ -0.31
COL6A1-207ENST00000612273 COQ3Q9NZJ6 369 aa13.14□□□□□ -0.31
COL6A1-207ENST00000612273 LAMA1P25391 3075 aa13.14□□□□□ -0.31
COL6A1-207ENST00000612273 INMT-MINDY4F8WBC2 141 aa13.14□□□□□ -0.31
COL6A1-207ENST00000612273 ERVH48-1M5A8F1 160 aa13.14□□□□□ -0.31
COL6A1-207ENST00000612273 VEGFDO43915 354 aa13.14□□□□□ -0.31
COL6A1-207ENST00000612273 ZIC2O95409 532 aaPredicted RBP13.14□□□□□ -0.31
COL6A1-207ENST00000612273 SAGP10523 405 aaPredicted RBP13.14□□□□□ -0.31
COL6A1-207ENST00000612273 MYOGP15173 224 aa13.14□□□□□ -0.31
COL6A1-207ENST00000612273 ALAS2P22557 587 aa13.14□□□□□ -0.31
COL6A1-207ENST00000612273 GABRA5P31644 462 aa13.14□□□□□ -0.31
COL6A1-207ENST00000612273 IFNA8P32881 189 aa13.14□□□□□ -0.31
COL6A1-207ENST00000612273 ST3GAL3Q11203 375 aa13.14□□□□□ -0.31
COL6A1-207ENST00000612273 ZNF628Q5EBL2 1059 aa13.14□□□□□ -0.31
COL6A1-207ENST00000612273 FAM205BPQ63HN1 556 aa13.14□□□□□ -0.31
COL6A1-207ENST00000612273 FIGNL1Q6PIW4 674 aa13.14□□□□□ -0.31
COL6A1-207ENST00000612273 IZUMO1Q8IYV9 350 aa13.14□□□□□ -0.31
COL6A1-207ENST00000612273 KLHL36Q8N4N3 616 aa13.14□□□□□ -0.31
COL6A1-207ENST00000612273 OR52E1Q8NGJ3 308 aa13.14□□□□□ -0.31
COL6A1-207ENST00000612273 PFN4Q8NHR9 129 aa13.14□□□□□ -0.31
COL6A1-207ENST00000612273 WDFY2Q96P53 400 aa13.14□□□□□ -0.31
COL6A1-207ENST00000612273 ATF6BQ99941 703 aa13.14□□□□□ -0.31
COL6A1-207ENST00000612273 FUZQ9BT04 418 aa13.14□□□□□ -0.31
COL6A1-207ENST00000612273 RNF32Q9H0A6 362 aa13.14□□□□□ -0.31
COL6A1-207ENST00000612273 KLHL28Q9NXS3 571 aa13.14□□□□□ -0.31
COL6A1-207ENST00000612273 ACAD8Q9UKU7 415 aa13.14□□□□□ -0.31
COL6A1-207ENST00000612273 CHST2Q9Y4C5 530 aa13.14□□□□□ -0.31
COL6A1-207ENST00000612273 LOC105369274A0A096LPK9 316 aa13.14□□□□□ -0.31
COL6A1-207ENST00000612273 A0A0A6YYD5 115 aa13.14□□□□□ -0.31
COL6A1-207ENST00000612273 J3QLW9 94 aa13.14□□□□□ -0.31
COL6A1-207ENST00000612273 BTN3A3O00478 584 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms