RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 CDK6Q00534 326 aa7.06□□□□□ -1.28
MSH6-211ENST00000606499 CHRNEQ04844 493 aa7.06□□□□□ -1.28
MSH6-211ENST00000606499 CEACAM7Q14002 265 aa7.06□□□□□ -1.28
MSH6-211ENST00000606499 SCARB2Q14108 478 aa7.06□□□□□ -1.28
MSH6-211ENST00000606499 GPR68Q15743 365 aa7.06□□□□□ -1.28
MSH6-211ENST00000606499 NTRK2Q16620 822 aa7.06□□□□□ -1.28
MSH6-211ENST00000606499 CPEB4Q17RY0 729 aaKnown RBP eCLIP7.06□□□□□ -1.28
MSH6-211ENST00000606499 VMACQ2NL98 169 aa7.06□□□□□ -1.28
MSH6-211ENST00000606499 GRAMD1BQ3KR37 738 aa7.06□□□□□ -1.28
MSH6-211ENST00000606499 FLYWCH1Q4VC44 716 aa7.06□□□□□ -1.28
MSH6-211ENST00000606499 BICRALQ6AI39 1079 aa7.06□□□□□ -1.28
MSH6-211ENST00000606499 TYW3Q6IPR3 259 aaKnown RBP7.06□□□□□ -1.28
MSH6-211ENST00000606499 IGFL2Q6UWQ7 119 aa7.06□□□□□ -1.28
MSH6-211ENST00000606499 FRRS1Q6ZNA5 592 aa7.06□□□□□ -1.28
MSH6-211ENST00000606499 C11orf65Q8NCR3 313 aa7.06□□□□□ -1.28
MSH6-211ENST00000606499 OR2T12Q8NG77 320 aa7.06□□□□□ -1.28
MSH6-211ENST00000606499 OR4C3Q8NH37 302 aa7.06□□□□□ -1.28
MSH6-211ENST00000606499 TTC9Q92623 222 aa7.06□□□□□ -1.28
MSH6-211ENST00000606499 DIO2Q92813 273 aa7.06□□□□□ -1.28
MSH6-211ENST00000606499 HGDQ93099 445 aa7.06□□□□□ -1.28
MSH6-211ENST00000606499 ABHD17AQ96GS6 310 aa7.06□□□□□ -1.28
MSH6-211ENST00000606499 REXO5Q96IC2 774 aaKnown RBP7.06□□□□□ -1.28
MSH6-211ENST00000606499 TRNT1Q96Q11 434 aaKnown RBP7.06□□□□□ -1.28
MSH6-211ENST00000606499 NODALQ96S42 347 aa7.06□□□□□ -1.28
MSH6-211ENST00000606499 CDRT15Q96T59 188 aa7.06□□□□□ -1.28
MSH6-211ENST00000606499 SMAD5Q99717 465 aaKnown RBP7.06□□□□□ -1.28
MSH6-211ENST00000606499 KCTD14Q9BQ13 255 aaPredicted RBP7.06□□□□□ -1.28
MSH6-211ENST00000606499 TREX2Q9BQ50 279 aaPredicted RBP7.06□□□□□ -1.28
MSH6-211ENST00000606499 ARHGAP9Q9BRR9 750 aa7.06□□□□□ -1.28
MSH6-211ENST00000606499 UTP23Q9BRU9 249 aaKnown RBP7.06□□□□□ -1.28
MSH6-211ENST00000606499 BTBD10Q9BSF8 475 aa7.06□□□□□ -1.28
MSH6-211ENST00000606499 G6PC3Q9BUM1 346 aa7.06□□□□□ -1.28
MSH6-211ENST00000606499 SPATA9Q9BWV2 254 aa7.06□□□□□ -1.28
MSH6-211ENST00000606499 HES7Q9BYE0 225 aa7.06□□□□□ -1.28
MSH6-211ENST00000606499 ZNF350Q9GZX5 532 aa7.06□□□□□ -1.28
MSH6-211ENST00000606499 QRSL1Q9H0R6 528 aaKnown RBP7.06□□□□□ -1.28
MSH6-211ENST00000606499 LRMDAQ9H2I8 198 aa7.06□□□□□ -1.28
MSH6-211ENST00000606499 TMEM38AQ9H6F2 299 aa7.06□□□□□ -1.28
MSH6-211ENST00000606499 HPF1Q9NWY4 346 aa7.06□□□□□ -1.28
MSH6-211ENST00000606499 THUMPD1Q9NXG2 353 aaKnown RBP7.06□□□□□ -1.28
MSH6-211ENST00000606499 LRFN1Q9P244 771 aa7.06□□□□□ -1.28
MSH6-211ENST00000606499 KCNE5Q9UJ90 142 aa7.06□□□□□ -1.28
MSH6-211ENST00000606499 LIPT1Q9Y234 373 aa7.06□□□□□ -1.28
MSH6-211ENST00000606499 WDR45Q9Y484 360 aa7.06□□□□□ -1.28
MSH6-211ENST00000606499 HRH3Q9Y5N1 445 aa7.06□□□□□ -1.28
MSH6-211ENST00000606499 CHCHD2Q9Y6H1 151 aaPredicted RBP7.06□□□□□ -1.28
MSH6-211ENST00000606499 EML6Q6ZMW3 1958 aa7.06□□□□□ -1.28
MSH6-211ENST00000606499 CHD6Q8TD26 2715 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 A0A0G2JMM0 328 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 A0A1W2PPB8 328 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 A0A1W2PRS3 328 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 ELOVL7A1L3X0 281 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 TMEM247A6NEH6 219 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 KIR3DP1A8MWS1 328 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 C5orf58C9J3I9 102 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 NPIPB9F8W1W9 429 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 HS6ST1O60243 411 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 STX11O75558 287 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 GCM2O75603 506 aaPredicted RBP7.05□□□□□ -1.28
MSH6-211ENST00000606499 SLC25A12O75746 678 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 ATP5HO75947 161 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 SOX30O94993 753 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 PGM3O95394 542 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 OXSR1O95747 527 aaPredicted RBP7.05□□□□□ -1.28
MSH6-211ENST00000606499 NCK1P16333 377 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 NAGAP17050 411 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 PCGF2P35227 344 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 DCTP40126 519 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 CYB561P49447 251 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 CRISP3P54108 245 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 PNLIPRP2P54317 469 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 PSMD4P55036 377 aaKnown RBP7.05□□□□□ -1.28
MSH6-211ENST00000606499 ARG2P78540 354 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 RBBP4Q09028 425 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 EFR3AQ14156 821 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 OR1C1Q15619 314 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 MAPK14Q16539 360 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 ZSCAN26Q16670 478 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 ZNF630Q2M218 657 aaPredicted RBP7.05□□□□□ -1.28
MSH6-211ENST00000606499 DNAL1Q4LDG9 190 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 LACTB2Q53H82 288 aaPredicted RBP7.05□□□□□ -1.28
MSH6-211ENST00000606499 SAMD4BQ5PRF9 694 aaKnown RBP7.05□□□□□ -1.28
MSH6-211ENST00000606499 PRAMEF20Q5VT98 475 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 SPINK14Q6IE38 97 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 REEP3Q6NUK4 255 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 LRRC74BQ6ZQY2 392 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 RTL4Q6ZR62 310 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 NUP54Q7Z3B4 507 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 GPALPP1Q8IXQ4 340 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 MICU2Q8IYU8 434 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 ZNF614Q8N883 585 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 EXD3Q8N9H8 876 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 POGLUT1Q8NBL1 392 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 MDS2Q8NDY4 140 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 CATSPER1Q8NEC5 780 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 C9orf43Q8TAL5 461 aaPredicted RBP7.05□□□□□ -1.28
MSH6-211ENST00000606499 BBS10Q8TAM1 723 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 GRHL3Q8TE85 626 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 ZG16BQ96DA0 208 aa7.05□□□□□ -1.28
MSH6-211ENST00000606499 THTPAQ9BU02 230 aa7.05□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms