RNA–Protein interactions for RNA: ENST00000599342.5

VRK3-216, Transcript of vaccinia related kinase 3, humanhuman

TSL 3

Gene VRK3, Length 795 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-216ENST00000599342 LMF2Q9BU23 707 aaKnown RBP8.86□□□□□ -0.99
VRK3-216ENST00000599342 LRTM1Q9HBL6 345 aa8.86□□□□□ -0.99
VRK3-216ENST00000599342 C1orf109Q9NX04 203 aa8.86□□□□□ -0.99
VRK3-216ENST00000599342 FLRT3Q9NZU0 649 aa8.86□□□□□ -0.99
VRK3-216ENST00000599342 STOML1Q9UBI4 398 aa8.86□□□□□ -0.99
VRK3-216ENST00000599342 EIF3LQ9Y262 564 aaKnown RBP8.86□□□□□ -0.99
VRK3-216ENST00000599342 CELSR1Q9NYQ6 3014 aa8.86□□□□□ -0.99
VRK3-216ENST00000599342 ANKRD17O75179 2603 aaKnown RBP8.85□□□□□ -0.99
VRK3-216ENST00000599342 CCDC168Q8NDH2 2452 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 TNFSF12-TNFSF13A0A0A6YY99 330 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 A8MXE2 369 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 B4DXG7 233 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 MSTNO14793 375 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 AZIN1O14977 448 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 GMFGO60234 142 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 DIAPH2O60879 1101 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 TNFSF13O75888 250 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 UTS2O95399 124 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 ANGPTL1O95841 491 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 TGM6O95932 706 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 PRPS2P11908 318 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 DDX5P17844 614 aaKnown RBP8.85□□□□□ -0.99
VRK3-216ENST00000599342 KLK2P20151 261 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 GABRA3P34903 492 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 PRKAG1P54619 331 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 MANFP55145 182 aaKnown RBP8.85□□□□□ -0.99
VRK3-216ENST00000599342 B3GALT5-AS1P59052 145 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 RPS3AP61247 264 aaKnown RBP8.85□□□□□ -0.99
VRK3-216ENST00000599342 RPL38P63173 70 aaKnown RBP8.85□□□□□ -0.99
VRK3-216ENST00000599342 C17orf67Q0P5P2 114 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 FGFBP1Q14512 234 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 KIAA0040Q15053 153 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 POU4F3Q15319 338 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 DEFB113Q30KQ7 82 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 ANKRD26P1Q6NSI1 321 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 SH2D5Q6ZV89 423 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 ZNF551Q7Z340 670 aaPredicted RBP8.85□□□□□ -0.99
VRK3-216ENST00000599342 MARCH3Q86UD3 253 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 C10orf107Q8IVU9 208 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 HOMEZQ8IX15 550 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 C4orf33Q8N1A6 199 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 CEP70Q8NHQ1 597 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 GPR151Q8TDV0 419 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 DUSP19Q8WTR2 217 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 PIK3R3Q92569 461 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 CIDECQ96AQ7 238 aaPredicted RBP8.85□□□□□ -0.99
VRK3-216ENST00000599342 C1GALT1C1Q96EU7 318 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 ZNF764Q96H86 408 aaPredicted RBP8.85□□□□□ -0.99
VRK3-216ENST00000599342 EGLN2Q96KS0 407 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 MS4A4EQ96PG1 132 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 TSSK3Q96PN8 268 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 FAM111AQ96PZ2 611 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 TRMOQ9BU70 441 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 TMUB1Q9BVT8 246 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 PINK1Q9BXM7 581 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 C12orf65Q9H3J6 166 aaKnown RBP8.85□□□□□ -0.99
VRK3-216ENST00000599342 REEP4Q9H6H4 257 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 HHATLQ9HCP6 504 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 TNFRSF12AQ9NP84 129 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 SH3BP4Q9P0V3 963 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 CCL27Q9Y4X3 112 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 PTGDR2Q9Y5Y4 395 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 POLQO75417 2590 aa8.85□□□□□ -0.99
VRK3-216ENST00000599342 DOCK7Q96N67 2140 aa8.84□□□□□ -0.99
VRK3-216ENST00000599342 GXYLT2A0PJZ3 443 aa8.84□□□□□ -0.99
VRK3-216ENST00000599342 OR2M5A3KFT3 312 aa8.84□□□□□ -0.99
VRK3-216ENST00000599342 NPIPB8E9PQR5 432 aa8.84□□□□□ -0.99
VRK3-216ENST00000599342 AKAP10O43572 662 aa8.84□□□□□ -0.99
VRK3-216ENST00000599342 TRIM13O60858 407 aa8.84□□□□□ -0.99
VRK3-216ENST00000599342 TNFRSF21O75509 655 aa8.84□□□□□ -0.99
VRK3-216ENST00000599342 ATE1O95260 518 aa8.84□□□□□ -0.99
VRK3-216ENST00000599342 HRGP04196 525 aa8.84□□□□□ -0.99
VRK3-216ENST00000599342 LINC00032P0C843 101 aa8.84□□□□□ -0.99
VRK3-216ENST00000599342 FCGR2AP12318 317 aa8.84□□□□□ -0.99
VRK3-216ENST00000599342 HPGDP15428 266 aa8.84□□□□□ -0.99
VRK3-216ENST00000599342 SDC1P18827 310 aa8.84□□□□□ -0.99
VRK3-216ENST00000599342 KCNJ5P48544 419 aa8.84□□□□□ -0.99
VRK3-216ENST00000599342 SIRPAP78324 504 aa8.84□□□□□ -0.99
VRK3-216ENST00000599342 PRR5P85299 388 aa8.84□□□□□ -0.99
VRK3-216ENST00000599342 PCLAFQ15004 111 aa8.84□□□□□ -0.99
VRK3-216ENST00000599342 PON3Q15166 354 aa8.84□□□□□ -0.99
VRK3-216ENST00000599342 SGCBQ16585 318 aa8.84□□□□□ -0.99
VRK3-216ENST00000599342 GRAMD1BQ3KR37 738 aa8.84□□□□□ -0.99
VRK3-216ENST00000599342 GALNTL6Q49A17 601 aa8.84□□□□□ -0.99
VRK3-216ENST00000599342 GLYR1Q49A26 553 aaPredicted RBP8.84□□□□□ -0.99
VRK3-216ENST00000599342 PPP4R4Q6NUP7 873 aa8.84□□□□□ -0.99
VRK3-216ENST00000599342 VWA1Q6PCB0 445 aa8.84□□□□□ -0.99
VRK3-216ENST00000599342 RNF165Q6ZSG1 346 aa8.84□□□□□ -0.99
VRK3-216ENST00000599342 DDIASQ8IXT1 998 aa8.84□□□□□ -0.99
VRK3-216ENST00000599342 CDRT4Q8N9R6 151 aa8.84□□□□□ -0.99
VRK3-216ENST00000599342 NUP43Q8NFH3 380 aa8.84□□□□□ -0.99
VRK3-216ENST00000599342 OR5M1Q8NGP8 315 aa8.84□□□□□ -0.99
VRK3-216ENST00000599342 CLHC1Q8NHS4 586 aa8.84□□□□□ -0.99
VRK3-216ENST00000599342 FIG4Q92562 907 aa8.84□□□□□ -0.99
VRK3-216ENST00000599342 SLC9A6Q92581 669 aa8.84□□□□□ -0.99
VRK3-216ENST00000599342 PGM2Q96G03 612 aa8.84□□□□□ -0.99
VRK3-216ENST00000599342 ZNF845Q96IR2 970 aaPredicted RBP8.84□□□□□ -0.99
VRK3-216ENST00000599342 SLC39A3Q9BRY0 314 aa8.84□□□□□ -0.99
VRK3-216ENST00000599342 PLEKHF2Q9H8W4 249 aa8.84□□□□□ -0.99
VRK3-216ENST00000599342 ZNF226Q9NYT6 803 aa8.84□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms