RNA–Protein interactions for RNA: ENST00000594806.5

TRIM28-204, Transcript of tripartite motif containing 28, humanhuman

TSL 5

Gene TRIM28, Length 861 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-204ENST00000594806 HCN1O60741 890 aa23.54■■□□□ 1.36
TRIM28-204ENST00000594806 CBR3O75828 277 aa23.54■■□□□ 1.36
TRIM28-204ENST00000594806 UTS2O95399 124 aa23.54■■□□□ 1.36
TRIM28-204ENST00000594806 ANP32DO95626 131 aa23.54■■□□□ 1.36
TRIM28-204ENST00000594806 IGKV1D-16P01601 117 aa23.54■■□□□ 1.36
TRIM28-204ENST00000594806 STSP08842 583 aa23.54■■□□□ 1.36
TRIM28-204ENST00000594806 ATP6V1C1P21283 382 aa23.54■■□□□ 1.36
TRIM28-204ENST00000594806 AGKQ53H12 422 aa23.54■■□□□ 1.36
TRIM28-204ENST00000594806 TSPEARQ8WU66 669 aa23.54■■□□□ 1.36
TRIM28-204ENST00000594806 VPS33AQ96AX1 596 aa23.54■■□□□ 1.36
TRIM28-204ENST00000594806 UBQLN3Q9H347 655 aa23.54■■□□□ 1.36
TRIM28-204ENST00000594806 ZNF385DQ9H6B1 395 aa23.54■■□□□ 1.36
TRIM28-204ENST00000594806 GALNT9Q9HCQ5 603 aa23.54■■□□□ 1.36
TRIM28-204ENST00000594806 UBQLN4Q9NRR5 601 aa23.54■■□□□ 1.36
TRIM28-204ENST00000594806 ZNF835Q9Y2P0 537 aa23.54■■□□□ 1.36
TRIM28-204ENST00000594806 C15orf41Q9Y2V0 281 aa23.54■■□□□ 1.36
TRIM28-204ENST00000594806 FREM3P0C091 2139 aa23.53■■□□□ 1.36
TRIM28-204ENST00000594806 A0A1B0GVC2 190 aa23.53■■□□□ 1.36
TRIM28-204ENST00000594806 CDC40O60508 579 aaKnown RBP eCLIP23.53■■□□□ 1.36
TRIM28-204ENST00000594806 WISP2O76076 250 aa23.53■■□□□ 1.36
TRIM28-204ENST00000594806 GUSBP08236 651 aa23.53■■□□□ 1.36
TRIM28-204ENST00000594806 RFPL3SP0C7P2 107 aa23.53■■□□□ 1.36
TRIM28-204ENST00000594806 TBXA2RP21731 343 aa23.53■■□□□ 1.36
TRIM28-204ENST00000594806 GDF1P27539 372 aa23.53■■□□□ 1.36
TRIM28-204ENST00000594806 CDKN2CP42773 168 aa23.53■■□□□ 1.36
TRIM28-204ENST00000594806 KHKP50053 298 aa23.53■■□□□ 1.36
TRIM28-204ENST00000594806 GAS1P54826 345 aa23.53■■□□□ 1.36
TRIM28-204ENST00000594806 DCST2Q5T1A1 773 aa23.53■■□□□ 1.36
TRIM28-204ENST00000594806 ATAD3BQ5T9A4 648 aa23.53■■□□□ 1.36
TRIM28-204ENST00000594806 CGB2Q6NT52 195 aa23.53■■□□□ 1.36
TRIM28-204ENST00000594806 FIGNL1Q6PIW4 674 aa23.53■■□□□ 1.36
TRIM28-204ENST00000594806 Q6ZPB1 254 aaPredicted RBP23.53■■□□□ 1.36
TRIM28-204ENST00000594806 PLCZ1Q86YW0 608 aa23.53■■□□□ 1.36
TRIM28-204ENST00000594806 SPPL2CQ8IUH8 684 aa23.53■■□□□ 1.36
TRIM28-204ENST00000594806 CLEC4FQ8N1N0 589 aa23.53■■□□□ 1.36
TRIM28-204ENST00000594806 CHDHQ8NE62 594 aaPredicted RBP23.53■■□□□ 1.36
TRIM28-204ENST00000594806 GNRHR2Q96P88 292 aa23.53■■□□□ 1.36
TRIM28-204ENST00000594806 OR51I1Q9H343 314 aa23.53■■□□□ 1.36
TRIM28-204ENST00000594806 HIVEP3Q5T1R4 2406 aa23.53■■□□□ 1.36
TRIM28-204ENST00000594806 OR14I1A6ND48 311 aa23.52■■□□□ 1.36
TRIM28-204ENST00000594806 GNB5O14775 395 aa23.52■■□□□ 1.36
TRIM28-204ENST00000594806 HPNP05981 417 aa23.52■■□□□ 1.36
TRIM28-204ENST00000594806 PTPN6P29350 595 aa23.52■■□□□ 1.36
TRIM28-204ENST00000594806 CASP6P55212 293 aa23.52■■□□□ 1.36
TRIM28-204ENST00000594806 C6orf10Q5SRN2 563 aa23.52■■□□□ 1.36
TRIM28-204ENST00000594806 TRILQ7L0X0 811 aa23.52■■□□□ 1.36
TRIM28-204ENST00000594806 WDSUB1Q8N9V3 476 aa23.52■■□□□ 1.36
TRIM28-204ENST00000594806 OR5D16Q8NGK9 328 aa23.52■■□□□ 1.36
TRIM28-204ENST00000594806 GTF2H4Q92759 462 aa23.52■■□□□ 1.36
TRIM28-204ENST00000594806 OTUB1Q96FW1 271 aaPredicted RBP23.52■■□□□ 1.36
TRIM28-204ENST00000594806 TBL1XR1Q9BZK7 514 aa23.52■■□□□ 1.36
TRIM28-204ENST00000594806 SERHL2Q9H4I8 314 aa23.52■■□□□ 1.36
TRIM28-204ENST00000594806 OSGIN2Q9Y236 505 aa23.52■■□□□ 1.36
TRIM28-204ENST00000594806 NCKAP5O14513 1909 aa23.51■■□□□ 1.35
TRIM28-204ENST00000594806 A0A1B0GUH1 482 aa23.51■■□□□ 1.35
TRIM28-204ENST00000594806 ALG1L2C9J202 215 aa23.51■■□□□ 1.35
TRIM28-204ENST00000594806 NR5A2O00482 541 aa23.51■■□□□ 1.35
TRIM28-204ENST00000594806 SLC19A2O60779 497 aa23.51■■□□□ 1.35
TRIM28-204ENST00000594806 HPGDP15428 266 aa23.51■■□□□ 1.35
TRIM28-204ENST00000594806 ABOP16442 354 aa23.51■■□□□ 1.35
TRIM28-204ENST00000594806 RPS26P62854 115 aaKnown RBP23.51■■□□□ 1.35
TRIM28-204ENST00000594806 C17orf67Q0P5P2 114 aa23.51■■□□□ 1.35
TRIM28-204ENST00000594806 GRAMD1BQ3KR37 738 aa23.51■■□□□ 1.35
TRIM28-204ENST00000594806 ARHGAP11BQ3KRB8 267 aa23.51■■□□□ 1.35
TRIM28-204ENST00000594806 HEPHL1Q6MZM0 1159 aa23.51■■□□□ 1.35
TRIM28-204ENST00000594806 ZNF527Q8NB42 609 aa23.51■■□□□ 1.35
TRIM28-204ENST00000594806 ZFP90Q8TF47 636 aa23.51■■□□□ 1.35
TRIM28-204ENST00000594806 SDF2Q99470 211 aa23.51■■□□□ 1.35
TRIM28-204ENST00000594806 LDAHQ9H6V9 325 aa23.51■■□□□ 1.35
TRIM28-204ENST00000594806 SLC52A3Q9NQ40 469 aa23.51■■□□□ 1.35
TRIM28-204ENST00000594806 PPP4R1LQ9P1A2 415 aa23.51■■□□□ 1.35
TRIM28-204ENST00000594806 MRPS18CQ9Y3D5 142 aaKnown RBP23.51■■□□□ 1.35
TRIM28-204ENST00000594806 KCNE3Q9Y6H6 103 aa23.51■■□□□ 1.35
TRIM28-204ENST00000594806 A0A096LPI6 279 aa23.5■■□□□ 1.35
TRIM28-204ENST00000594806 TRGV5A0A0B4J1U4 118 aa23.5■■□□□ 1.35
TRIM28-204ENST00000594806 A0A1B0GTH9 108 aa23.5■■□□□ 1.35
TRIM28-204ENST00000594806 A0A1W2PP18 115 aa23.5■■□□□ 1.35
TRIM28-204ENST00000594806 A0A1W2PQD3 144 aa23.5■■□□□ 1.35
TRIM28-204ENST00000594806 AQP7O14520 342 aa23.5■■□□□ 1.35
TRIM28-204ENST00000594806 GSNP06396 782 aa23.5■■□□□ 1.35
TRIM28-204ENST00000594806 PTGS2P35354 604 aa23.5■■□□□ 1.35
TRIM28-204ENST00000594806 CCNJQ5T5M9 372 aa23.5■■□□□ 1.35
TRIM28-204ENST00000594806 AP1ARQ63HQ0 302 aa23.5■■□□□ 1.35
TRIM28-204ENST00000594806 C16orf62Q7Z3J2 963 aa23.5■■□□□ 1.35
TRIM28-204ENST00000594806 RNF130Q86XS8 419 aa23.5■■□□□ 1.35
TRIM28-204ENST00000594806 MISPQ8IVT2 679 aa23.5■■□□□ 1.35
TRIM28-204ENST00000594806 OR4C3Q8NH37 302 aa23.5■■□□□ 1.35
TRIM28-204ENST00000594806 XAGE5Q8WWM1 108 aa23.5■■□□□ 1.35
TRIM28-204ENST00000594806 OIT3Q8WWZ8 545 aa23.5■■□□□ 1.35
TRIM28-204ENST00000594806 RAD21L1Q9H4I0 556 aa23.5■■□□□ 1.35
TRIM28-204ENST00000594806 POLE3Q9NRF9 147 aa23.5■■□□□ 1.35
TRIM28-204ENST00000594806 FLRT3Q9NZU0 649 aa23.5■■□□□ 1.35
TRIM28-204ENST00000594806 LIPT1Q9Y234 373 aa23.5■■□□□ 1.35
TRIM28-204ENST00000594806 CLEC18AA5D8T8 446 aa23.49■■□□□ 1.35
TRIM28-204ENST00000594806 SCDO00767 359 aa23.49■■□□□ 1.35
TRIM28-204ENST00000594806 PRRG2O14669 202 aa23.49■■□□□ 1.35
TRIM28-204ENST00000594806 SCO2O43819 266 aa23.49■■□□□ 1.35
TRIM28-204ENST00000594806 STX11O75558 287 aa23.49■■□□□ 1.35
TRIM28-204ENST00000594806 TRAPPC6AO75865 159 aa23.49■■□□□ 1.35
TRIM28-204ENST00000594806 PDE9AO76083 593 aa23.49■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms