RNA–Protein interactions for RNA: ENST00000594504.5

UPF1-203, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 3

Gene UPF1, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-203ENST00000594504 FLYWCH1Q4VC44 716 aa11.37□□□□□ -0.59
UPF1-203ENST00000594504 NSUN5P2Q63ZY6 315 aa11.37□□□□□ -0.59
UPF1-203ENST00000594504 ANGPTL8Q6UXH0 198 aa11.37□□□□□ -0.59
UPF1-203ENST00000594504 TGIF2LYQ8IUE0 185 aa11.37□□□□□ -0.59
UPF1-203ENST00000594504 LACC1Q8IV20 430 aa11.37□□□□□ -0.59
UPF1-203ENST00000594504 RIMKLAQ8IXN7 391 aa11.37□□□□□ -0.59
UPF1-203ENST00000594504 NATD1Q8N6N6 113 aa11.37□□□□□ -0.59
UPF1-203ENST00000594504 FAM83FQ8NEG4 500 aaPredicted RBP11.37□□□□□ -0.59
UPF1-203ENST00000594504 OR7G2Q8NG99 324 aa11.37□□□□□ -0.59
UPF1-203ENST00000594504 OR1J4Q8NGS1 313 aa11.37□□□□□ -0.59
UPF1-203ENST00000594504 GOT1L1Q8NHS2 421 aaPredicted RBP11.37□□□□□ -0.59
UPF1-203ENST00000594504 HGDQ93099 445 aa11.37□□□□□ -0.59
UPF1-203ENST00000594504 ABTB1Q969K4 478 aaPredicted RBP11.37□□□□□ -0.59
UPF1-203ENST00000594504 RMND5BQ96G75 393 aaPredicted RBP11.37□□□□□ -0.59
UPF1-203ENST00000594504 POM121Q96HA1 1249 aa11.37□□□□□ -0.59
UPF1-203ENST00000594504 TMEM41AQ96HV5 264 aa11.37□□□□□ -0.59
UPF1-203ENST00000594504 MAELQ96JY0 434 aaKnown RBP11.37□□□□□ -0.59
UPF1-203ENST00000594504 MAGEB18Q96M61 343 aa11.37□□□□□ -0.59
UPF1-203ENST00000594504 GSX1Q9H4S2 264 aaPredicted RBP11.37□□□□□ -0.59
UPF1-203ENST00000594504 ANKRA2Q9H9E1 313 aa11.37□□□□□ -0.59
UPF1-203ENST00000594504 GALNT9Q9HCQ5 603 aa11.37□□□□□ -0.59
UPF1-203ENST00000594504 SLCO1B3Q9NPD5 702 aa11.37□□□□□ -0.59
UPF1-203ENST00000594504 ACSS1Q9NUB1 689 aaPredicted RBP11.37□□□□□ -0.59
UPF1-203ENST00000594504 ATAD3AQ9NVI7 634 aa11.37□□□□□ -0.59
UPF1-203ENST00000594504 ADGRG4Q8IZF6 3080 aa11.36□□□□□ -0.59
UPF1-203ENST00000594504 ICOSLGO75144 302 aa11.36□□□□□ -0.59
UPF1-203ENST00000594504 COQ9O75208 318 aa11.36□□□□□ -0.59
UPF1-203ENST00000594504 PPM1BO75688 479 aa11.36□□□□□ -0.59
UPF1-203ENST00000594504 KLK2P20151 261 aa11.36□□□□□ -0.59
UPF1-203ENST00000594504 MC3RP41968 323 aa11.36□□□□□ -0.59
UPF1-203ENST00000594504 STARP49675 285 aa11.36□□□□□ -0.59
UPF1-203ENST00000594504 EMDP50402 254 aa11.36□□□□□ -0.59
UPF1-203ENST00000594504 DCAF7P61962 342 aa11.36□□□□□ -0.59
UPF1-203ENST00000594504 SRYQ05066 204 aa11.36□□□□□ -0.59
UPF1-203ENST00000594504 FOXF2Q12947 444 aa11.36□□□□□ -0.59
UPF1-203ENST00000594504 HSPB3Q12988 150 aa11.36□□□□□ -0.59
UPF1-203ENST00000594504 NHSL2Q5HYW2 709 aa11.36□□□□□ -0.59
UPF1-203ENST00000594504 CPTPQ5TA50 214 aa11.36□□□□□ -0.59
UPF1-203ENST00000594504 TIGD3Q6B0B8 471 aa11.36□□□□□ -0.59
UPF1-203ENST00000594504 TMEM107Q6UX40 140 aa11.36□□□□□ -0.59
UPF1-203ENST00000594504 MAVSQ7Z434 540 aa11.36□□□□□ -0.59
UPF1-203ENST00000594504 SPATA19Q7Z5L4 167 aa11.36□□□□□ -0.59
UPF1-203ENST00000594504 CAMKMTQ7Z624 323 aa11.36□□□□□ -0.59
UPF1-203ENST00000594504 PM20D2Q8IYS1 436 aa11.36□□□□□ -0.59
UPF1-203ENST00000594504 OR2L13Q8N349 312 aa11.36□□□□□ -0.59
UPF1-203ENST00000594504 ARFGAP2Q8N6H7 521 aa11.36□□□□□ -0.59
UPF1-203ENST00000594504 KRTCAP2Q8N6L1 136 aa11.36□□□□□ -0.59
UPF1-203ENST00000594504 C9orf106Q8NAJ2 232 aa11.36□□□□□ -0.59
UPF1-203ENST00000594504 OR7A2PQ8NGA2 310 aa11.36□□□□□ -0.59
UPF1-203ENST00000594504 ACTRT2Q8TDY3 377 aa11.36□□□□□ -0.59
UPF1-203ENST00000594504 NINJ1Q92982 152 aa11.36□□□□□ -0.59
UPF1-203ENST00000594504 CIDECQ96AQ7 238 aaPredicted RBP11.36□□□□□ -0.59
UPF1-203ENST00000594504 COQ8BQ96D53 544 aa11.36□□□□□ -0.59
UPF1-203ENST00000594504 OMA1Q96E52 524 aa11.36□□□□□ -0.59
UPF1-203ENST00000594504 SECISBP2Q96T21 854 aaKnown RBP11.36□□□□□ -0.59
UPF1-203ENST00000594504 WDR55Q9H6Y2 383 aaPredicted RBP11.36□□□□□ -0.59
UPF1-203ENST00000594504 METTL7AQ9H8H3 244 aa11.36□□□□□ -0.59
UPF1-203ENST00000594504 DDX18Q9NVP1 670 aaKnown RBP11.36□□□□□ -0.59
UPF1-203ENST00000594504 TAS2R9Q9NYW1 312 aa11.36□□□□□ -0.59
UPF1-203ENST00000594504 ZNF629Q9UEG4 869 aaPredicted RBP11.36□□□□□ -0.59
UPF1-203ENST00000594504 C19orf53Q9UNZ5 99 aaPredicted RBP11.36□□□□□ -0.59
UPF1-203ENST00000594504 USH1CQ9Y6N9 552 aa11.36□□□□□ -0.59
UPF1-203ENST00000594504 MPDZO75970 2070 aa11.36□□□□□ -0.59
UPF1-203ENST00000594504 POLQO75417 2590 aa11.35□□□□□ -0.59
UPF1-203ENST00000594504 GOLGA8QA0A0J9YX86 632 aa11.35□□□□□ -0.59
UPF1-203ENST00000594504 GOLGA8OA6NCC3 632 aa11.35□□□□□ -0.59
UPF1-203ENST00000594504 CD8B2A6NJW9 211 aa11.35□□□□□ -0.59
UPF1-203ENST00000594504 EEF1E1-BLOC1S5C9J1V9 151 aa11.35□□□□□ -0.59
UPF1-203ENST00000594504 GOLGA8NF8WBI6 632 aa11.35□□□□□ -0.59
UPF1-203ENST00000594504 ZNF195O14628 629 aa11.35□□□□□ -0.59
UPF1-203ENST00000594504 ACOX3O15254 700 aa11.35□□□□□ -0.59
UPF1-203ENST00000594504 EEF1E1O43324 174 aaKnown RBP11.35□□□□□ -0.59
UPF1-203ENST00000594504 UGT2B11O75310 529 aa11.35□□□□□ -0.59
UPF1-203ENST00000594504 TGDSO95455 350 aa11.35□□□□□ -0.59
UPF1-203ENST00000594504 LAMP1P11279 417 aa11.35□□□□□ -0.59
UPF1-203ENST00000594504 DRD5P21918 477 aa11.35□□□□□ -0.59
UPF1-203ENST00000594504 DNASE1P24855 282 aa11.35□□□□□ -0.59
UPF1-203ENST00000594504 CTSSP25774 331 aa11.35□□□□□ -0.59
UPF1-203ENST00000594504 GPC1P35052 558 aa11.35□□□□□ -0.59
UPF1-203ENST00000594504 PPICP45877 212 aa11.35□□□□□ -0.59
UPF1-203ENST00000594504 TMED10P49755 219 aaKnown RBP11.35□□□□□ -0.59
UPF1-203ENST00000594504 MANFP55145 182 aaKnown RBP11.35□□□□□ -0.59
UPF1-203ENST00000594504 PSPHP78330 225 aa11.35□□□□□ -0.59
UPF1-203ENST00000594504 RPP38P78345 283 aaKnown RBP11.35□□□□□ -0.59
UPF1-203ENST00000594504 FOXD4Q12950 439 aaPredicted RBP11.35□□□□□ -0.59
UPF1-203ENST00000594504 DAZAP2Q15038 168 aaPredicted RBP11.35□□□□□ -0.59
UPF1-203ENST00000594504 MLC1Q15049 377 aa11.35□□□□□ -0.59
UPF1-203ENST00000594504 FBXL19-AS1Q494R0 122 aa11.35□□□□□ -0.59
UPF1-203ENST00000594504 SLC9B1Q4ZJI4 515 aa11.35□□□□□ -0.59
UPF1-203ENST00000594504 NXNQ6DKJ4 435 aa11.35□□□□□ -0.59
UPF1-203ENST00000594504 ZNF551Q7Z340 670 aaPredicted RBP11.35□□□□□ -0.59
UPF1-203ENST00000594504 NUP54Q7Z3B4 507 aa11.35□□□□□ -0.59
UPF1-203ENST00000594504 CEP70Q8NHQ1 597 aa11.35□□□□□ -0.59
UPF1-203ENST00000594504 FAM222BQ8WU58 562 aa11.35□□□□□ -0.59
UPF1-203ENST00000594504 ELP4Q96EB1 424 aa11.35□□□□□ -0.59
UPF1-203ENST00000594504 HSPBAP1Q96EW2 488 aa11.35□□□□□ -0.59
UPF1-203ENST00000594504 LCORQ96JN0 433 aaPredicted RBP11.35□□□□□ -0.59
UPF1-203ENST00000594504 VSTM2LQ96N03 204 aa11.35□□□□□ -0.59
UPF1-203ENST00000594504 BTBD9Q96Q07 612 aa11.35□□□□□ -0.59
UPF1-203ENST00000594504 TUBA1CQ9BQE3 449 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms