RNA–Protein interactions for RNA: ENST00000594090.5

VRK3-206, Transcript of vaccinia related kinase 3, humanhuman

TSL 1 (best)

Gene VRK3, Length 1,448 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-206ENST00000594090 NPIPA3F8WFD2 350 aa13.28□□□□□ -0.28
VRK3-206ENST00000594090 EDF1O60869 148 aaKnown RBP13.28□□□□□ -0.28
VRK3-206ENST00000594090 SLC22A3O75751 556 aa13.28□□□□□ -0.28
VRK3-206ENST00000594090 TRAPPC6AO75865 159 aa13.28□□□□□ -0.28
VRK3-206ENST00000594090 UTS2O95399 124 aa13.28□□□□□ -0.28
VRK3-206ENST00000594090 ZFP36L2P47974 494 aaKnown RBP13.28□□□□□ -0.28
VRK3-206ENST00000594090 TRPC1P48995 793 aa13.28□□□□□ -0.28
VRK3-206ENST00000594090 POU6F2P78424 691 aaPredicted RBP13.28□□□□□ -0.28
VRK3-206ENST00000594090 TOMM20Q15388 145 aa13.28□□□□□ -0.28
VRK3-206ENST00000594090 GRAMD1BQ3KR37 738 aa13.28□□□□□ -0.28
VRK3-206ENST00000594090 CCNJQ5T5M9 372 aa13.28□□□□□ -0.28
VRK3-206ENST00000594090 C6orf120Q7Z4R8 191 aa13.28□□□□□ -0.28
VRK3-206ENST00000594090 ZAR1Q86SH2 424 aa13.28□□□□□ -0.28
VRK3-206ENST00000594090 PLCZ1Q86YW0 608 aa13.28□□□□□ -0.28
VRK3-206ENST00000594090 ARFGAP2Q8N6H7 521 aa13.28□□□□□ -0.28
VRK3-206ENST00000594090 GOT1L1Q8NHS2 421 aaPredicted RBP13.28□□□□□ -0.28
VRK3-206ENST00000594090 ADAMTS15Q8TE58 950 aa13.28□□□□□ -0.28
VRK3-206ENST00000594090 CCDC120Q96HB5 630 aa13.28□□□□□ -0.28
VRK3-206ENST00000594090 SLC35G5Q96KT7 338 aa13.28□□□□□ -0.28
VRK3-206ENST00000594090 OR7D2Q96RA2 312 aa13.28□□□□□ -0.28
VRK3-206ENST00000594090 SERHL2Q9H4I8 314 aa13.28□□□□□ -0.28
VRK3-206ENST00000594090 TNFRSF10DQ9UBN6 386 aa13.28□□□□□ -0.28
VRK3-206ENST00000594090 SUCOQ9UBS9 1254 aaKnown RBP13.28□□□□□ -0.28
VRK3-206ENST00000594090 COL12A1Q99715 3063 aa13.28□□□□□ -0.28
VRK3-206ENST00000594090 RP1L1Q8IWN7 2480 aaPredicted RBP13.27□□□□□ -0.29
VRK3-206ENST00000594090 C17orf51A8MQB3 221 aa13.27□□□□□ -0.29
VRK3-206ENST00000594090 B4DXG7 233 aa13.27□□□□□ -0.29
VRK3-206ENST00000594090 BCKDKO14874 412 aa13.27□□□□□ -0.29
VRK3-206ENST00000594090 CBR3O75828 277 aa13.27□□□□□ -0.29
VRK3-206ENST00000594090 UQCRC2P22695 453 aa13.27□□□□□ -0.29
VRK3-206ENST00000594090 MRPL19P49406 292 aaKnown RBP13.27□□□□□ -0.29
VRK3-206ENST00000594090 RPS26P62854 115 aaKnown RBP13.27□□□□□ -0.29
VRK3-206ENST00000594090 LRRC74AQ0VAA2 488 aa13.27□□□□□ -0.29
VRK3-206ENST00000594090 EMC4Q5J8M3 183 aa13.27□□□□□ -0.29
VRK3-206ENST00000594090 DCST2Q5T1A1 773 aa13.27□□□□□ -0.29
VRK3-206ENST00000594090 C3P1Q6ZMU1 363 aa13.27□□□□□ -0.29
VRK3-206ENST00000594090 MIER2Q8N344 545 aa13.27□□□□□ -0.29
VRK3-206ENST00000594090 FAM83FQ8NEG4 500 aaPredicted RBP13.27□□□□□ -0.29
VRK3-206ENST00000594090 OR5D16Q8NGK9 328 aa13.27□□□□□ -0.29
VRK3-206ENST00000594090 OR9I1Q8NGQ6 314 aa13.27□□□□□ -0.29
VRK3-206ENST00000594090 STON2Q8WXE9 905 aa13.27□□□□□ -0.29
VRK3-206ENST00000594090 SARAFQ96BY9 339 aa13.27□□□□□ -0.29
VRK3-206ENST00000594090 PSMG3-AS1Q96PY0 264 aa13.27□□□□□ -0.29
VRK3-206ENST00000594090 RTN4RQ9BZR6 473 aa13.27□□□□□ -0.29
VRK3-206ENST00000594090 FBXO34Q9NWN3 711 aa13.27□□□□□ -0.29
VRK3-206ENST00000594090 PPP4R1LQ9P1A2 415 aa13.27□□□□□ -0.29
VRK3-206ENST00000594090 FBXL2Q9UKC9 423 aa13.27□□□□□ -0.29
VRK3-206ENST00000594090 MEMO1Q9Y316 297 aa13.27□□□□□ -0.29
VRK3-206ENST00000594090 KCNE3Q9Y6H6 103 aa13.27□□□□□ -0.29
VRK3-206ENST00000594090 GTF3C1Q12789 2109 aa13.27□□□□□ -0.29
VRK3-206ENST00000594090 ZNF407Q9C0G0 2248 aa13.26□□□□□ -0.29
VRK3-206ENST00000594090 NUP214P35658 2090 aaPredicted RBP13.26□□□□□ -0.29
VRK3-206ENST00000594090 ATP8B1O43520 1251 aa13.26□□□□□ -0.29
VRK3-206ENST00000594090 ZG16O60844 167 aa13.26□□□□□ -0.29
VRK3-206ENST00000594090 SOX30O94993 753 aa13.26□□□□□ -0.29
VRK3-206ENST00000594090 OXSR1O95747 527 aaPredicted RBP13.26□□□□□ -0.29
VRK3-206ENST00000594090 IL6P05231 212 aa13.26□□□□□ -0.29
VRK3-206ENST00000594090 NGFRP08138 427 aa13.26□□□□□ -0.29
VRK3-206ENST00000594090 ESRRAP11474 423 aaPredicted RBP13.26□□□□□ -0.29
VRK3-206ENST00000594090 TBXA2RP21731 343 aa13.26□□□□□ -0.29
VRK3-206ENST00000594090 MATN1P21941 496 aa13.26□□□□□ -0.29
VRK3-206ENST00000594090 LCN1P31025 176 aa13.26□□□□□ -0.29
VRK3-206ENST00000594090 CDKN2CP42773 168 aa13.26□□□□□ -0.29
VRK3-206ENST00000594090 CLK3P49761 638 aaKnown RBP13.26□□□□□ -0.29
VRK3-206ENST00000594090 POLR2JP52435 117 aaKnown RBP13.26□□□□□ -0.29
VRK3-206ENST00000594090 STX1BP61266 288 aa13.26□□□□□ -0.29
VRK3-206ENST00000594090 STX5Q13190 355 aa13.26□□□□□ -0.29
VRK3-206ENST00000594090 WIPI1Q5MNZ9 446 aaPredicted RBP13.26□□□□□ -0.29
VRK3-206ENST00000594090 SAXO2Q658L1 398 aa13.26□□□□□ -0.29
VRK3-206ENST00000594090 OR5M10Q6IEU7 315 aa13.26□□□□□ -0.29
VRK3-206ENST00000594090 MTFR2Q6P444 385 aa13.26□□□□□ -0.29
VRK3-206ENST00000594090 APOOLQ6UXV4 268 aa13.26□□□□□ -0.29
VRK3-206ENST00000594090 MARCH3Q86UD3 253 aa13.26□□□□□ -0.29
VRK3-206ENST00000594090 EID3Q8N140 333 aa13.26□□□□□ -0.29
VRK3-206ENST00000594090 OR4K17Q8NGC6 315 aa13.26□□□□□ -0.29
VRK3-206ENST00000594090 OR5M9Q8NGP3 310 aa13.26□□□□□ -0.29
VRK3-206ENST00000594090 NEURL3Q96EH8 262 aa13.26□□□□□ -0.29
VRK3-206ENST00000594090 THOC1Q96FV9 657 aaKnown RBP13.26□□□□□ -0.29
VRK3-206ENST00000594090 PANX1Q96RD7 426 aa13.26□□□□□ -0.29
VRK3-206ENST00000594090 SLC35A5Q9BS91 424 aa13.26□□□□□ -0.29
VRK3-206ENST00000594090 INPP5KQ9BT40 448 aa13.26□□□□□ -0.29
VRK3-206ENST00000594090 G6PC3Q9BUM1 346 aa13.26□□□□□ -0.29
VRK3-206ENST00000594090 TBL1XR1Q9BZK7 514 aa13.26□□□□□ -0.29
VRK3-206ENST00000594090 OR2B2Q9GZK3 357 aa13.26□□□□□ -0.29
VRK3-206ENST00000594090 TP63Q9H3D4 680 aaPredicted RBP13.26□□□□□ -0.29
VRK3-206ENST00000594090 NPHS2Q9NP85 383 aa13.26□□□□□ -0.29
VRK3-206ENST00000594090 SDHAF3Q9NRP4 125 aa13.26□□□□□ -0.29
VRK3-206ENST00000594090 PNPLA3Q9NST1 481 aa13.26□□□□□ -0.29
VRK3-206ENST00000594090 FLNCQ14315 2725 aa13.26□□□□□ -0.29
VRK3-206ENST00000594090 C15orf38-AP3S2A0A0A6YYH1 394 aa13.25□□□□□ -0.29
VRK3-206ENST00000594090 FAM234BA2RU67 622 aa13.25□□□□□ -0.29
VRK3-206ENST00000594090 CCDC154A6NI56 674 aa13.25□□□□□ -0.29
VRK3-206ENST00000594090 ALG1L2C9J202 215 aa13.25□□□□□ -0.29
VRK3-206ENST00000594090 E9PLN8 166 aa13.25□□□□□ -0.29
VRK3-206ENST00000594090 SRD5A2P31213 254 aa13.25□□□□□ -0.29
VRK3-206ENST00000594090 CHI3L1P36222 383 aaPredicted RBP13.25□□□□□ -0.29
VRK3-206ENST00000594090 ADORA2A-AS1P86434 159 aa13.25□□□□□ -0.29
VRK3-206ENST00000594090 GXYLT1Q4G148 440 aa13.25□□□□□ -0.29
VRK3-206ENST00000594090 EIPR1Q53HC9 387 aa13.25□□□□□ -0.29
VRK3-206ENST00000594090 WLSQ5T9L3 541 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms