RNA–Protein interactions for RNA: ENST00000593168.5

VMP1-217, Transcript of vacuole membrane protein 1, humanhuman

TSL 3

Gene VMP1, Length 558 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-217ENST00000593168 PPICP45877 212 aa12.47□□□□□ -0.41
VMP1-217ENST00000593168 KCNJ5P48544 419 aa12.47□□□□□ -0.41
VMP1-217ENST00000593168 GPR143P51810 404 aa12.47□□□□□ -0.41
VMP1-217ENST00000593168 DCAF7P61962 342 aa12.47□□□□□ -0.41
VMP1-217ENST00000593168 SRSF6Q13247 344 aaKnown RBP12.47□□□□□ -0.41
VMP1-217ENST00000593168 TRIP10Q15642 601 aa12.47□□□□□ -0.41
VMP1-217ENST00000593168 DUSP7Q16829 419 aa12.47□□□□□ -0.41
VMP1-217ENST00000593168 SFT2D3Q587I9 215 aa12.47□□□□□ -0.41
VMP1-217ENST00000593168 CT45A2Q5DJT8 189 aa12.47□□□□□ -0.41
VMP1-217ENST00000593168 DCST2Q5T1A1 773 aa12.47□□□□□ -0.41
VMP1-217ENST00000593168 OGFRL1Q5TC84 451 aaPredicted RBP12.47□□□□□ -0.41
VMP1-217ENST00000593168 TYW3Q6IPR3 259 aaKnown RBP12.47□□□□□ -0.41
VMP1-217ENST00000593168 FAM199XQ6PEV8 388 aaPredicted RBP12.47□□□□□ -0.41
VMP1-217ENST00000593168 FRRS1Q6ZNA5 592 aa12.47□□□□□ -0.41
VMP1-217ENST00000593168 LANCL3Q6ZV70 420 aa12.47□□□□□ -0.41
VMP1-217ENST00000593168 AMIGO2Q86SJ2 522 aa12.47□□□□□ -0.41
VMP1-217ENST00000593168 CATSPER1Q8NEC5 780 aa12.47□□□□□ -0.41
VMP1-217ENST00000593168 OR10Q1Q8NGQ4 319 aa12.47□□□□□ -0.41
VMP1-217ENST00000593168 PIK3R3Q92569 461 aa12.47□□□□□ -0.41
VMP1-217ENST00000593168 BTBD9Q96Q07 612 aa12.47□□□□□ -0.41
VMP1-217ENST00000593168 BDH2Q9BUT1 245 aa12.47□□□□□ -0.41
VMP1-217ENST00000593168 NUDT9Q9BW91 350 aa12.47□□□□□ -0.41
VMP1-217ENST00000593168 ZNF350Q9GZX5 532 aa12.47□□□□□ -0.41
VMP1-217ENST00000593168 VCX3BQ9H321 246 aa12.47□□□□□ -0.41
VMP1-217ENST00000593168 TRIM45Q9H8W5 580 aaPredicted RBP12.47□□□□□ -0.41
VMP1-217ENST00000593168 Q9N2J8 555 aa12.47□□□□□ -0.41
VMP1-217ENST00000593168 WDR70Q9NW82 654 aa12.47□□□□□ -0.41
VMP1-217ENST00000593168 DNAJB9Q9UBS3 223 aa12.47□□□□□ -0.41
VMP1-217ENST00000593168 SEC14L3Q9UDX4 400 aa12.47□□□□□ -0.41
VMP1-217ENST00000593168 PRDM4Q9UKN5 801 aa12.47□□□□□ -0.41
VMP1-217ENST00000593168 PADI2Q9Y2J8 665 aa12.47□□□□□ -0.41
VMP1-217ENST00000593168 WDR45Q9Y484 360 aa12.47□□□□□ -0.41
VMP1-217ENST00000593168 CCDC88CQ9P219 2028 aa12.47□□□□□ -0.41
VMP1-217ENST00000593168 LOC102723996A0A087X1L8 192 aa12.46□□□□□ -0.41
VMP1-217ENST00000593168 GXYLT2A0PJZ3 443 aa12.46□□□□□ -0.41
VMP1-217ENST00000593168 SAGE2PA6NJ88 616 aa12.46□□□□□ -0.41
VMP1-217ENST00000593168 OR6C76A6NM76 312 aa12.46□□□□□ -0.41
VMP1-217ENST00000593168 FCMRO60667 390 aa12.46□□□□□ -0.41
VMP1-217ENST00000593168 DPM1O60762 260 aa12.46□□□□□ -0.41
VMP1-217ENST00000593168 KLF7O75840 302 aaPredicted RBP12.46□□□□□ -0.41
VMP1-217ENST00000593168 PRSS23O95084 383 aa12.46□□□□□ -0.41
VMP1-217ENST00000593168 IGHEP01854 428 aa12.46□□□□□ -0.41
VMP1-217ENST00000593168 FABP3P05413 133 aa12.46□□□□□ -0.41
VMP1-217ENST00000593168 FESP07332 822 aa12.46□□□□□ -0.41
VMP1-217ENST00000593168 DRD5P21918 477 aa12.46□□□□□ -0.41
VMP1-217ENST00000593168 FOXL2P58012 376 aa12.46□□□□□ -0.41
VMP1-217ENST00000593168 TGIF1Q15583 401 aa12.46□□□□□ -0.41
VMP1-217ENST00000593168 IQCCQ4KMZ1 466 aa12.46□□□□□ -0.41
VMP1-217ENST00000593168 COLEC12Q5KU26 742 aa12.46□□□□□ -0.41
VMP1-217ENST00000593168 LPCAT4Q643R3 524 aa12.46□□□□□ -0.41
VMP1-217ENST00000593168 FAAH2Q6GMR7 532 aa12.46□□□□□ -0.41
VMP1-217ENST00000593168 CPEB2Q7Z5Q1 589 aaKnown RBP12.46□□□□□ -0.41
VMP1-217ENST00000593168 ZDHHC21Q8IVQ6 265 aa12.46□□□□□ -0.41
VMP1-217ENST00000593168 ZNF619Q8N2I2 560 aa12.46□□□□□ -0.41
VMP1-217ENST00000593168 ZNF321PQ8N8H1 164 aa12.46□□□□□ -0.41
VMP1-217ENST00000593168 SMYD1Q8NB12 490 aa12.46□□□□□ -0.41
VMP1-217ENST00000593168 NFAM1Q8NET5 270 aaPredicted RBP12.46□□□□□ -0.41
VMP1-217ENST00000593168 B3GNT7Q8NFL0 401 aa12.46□□□□□ -0.41
VMP1-217ENST00000593168 OR2Y1Q8NGV0 311 aa12.46□□□□□ -0.41
VMP1-217ENST00000593168 GEMIN6Q8WXD5 167 aaKnown RBP12.46□□□□□ -0.41
VMP1-217ENST00000593168 EXTL1Q92935 676 aa12.46□□□□□ -0.41
VMP1-217ENST00000593168 C7orf34Q96L11 122 aa12.46□□□□□ -0.41
VMP1-217ENST00000593168 ZNF354BQ96LW1 612 aa12.46□□□□□ -0.41
VMP1-217ENST00000593168 LPAR4Q99677 370 aa12.46□□□□□ -0.41
VMP1-217ENST00000593168 WDR77Q9BQA1 342 aaPredicted RBP12.46□□□□□ -0.41
VMP1-217ENST00000593168 PINK1Q9BXM7 581 aa12.46□□□□□ -0.41
VMP1-217ENST00000593168 ITPAQ9BY32 194 aa12.46□□□□□ -0.41
VMP1-217ENST00000593168 SEMA6AQ9H2E6 1030 aa12.46□□□□□ -0.41
VMP1-217ENST00000593168 COPS7AQ9UBW8 275 aa12.46□□□□□ -0.41
VMP1-217ENST00000593168 DTX4Q9Y2E6 619 aa12.46□□□□□ -0.41
VMP1-217ENST00000593168 IFT52Q9Y366 437 aa12.46□□□□□ -0.41
VMP1-217ENST00000593168 SYT5O00445 386 aa12.45□□□□□ -0.42
VMP1-217ENST00000593168 KCNK2O95069 426 aa12.45□□□□□ -0.42
VMP1-217ENST00000593168 CST1P01037 141 aa12.45□□□□□ -0.42
VMP1-217ENST00000593168 MT-ND1P03886 318 aa12.45□□□□□ -0.42
VMP1-217ENST00000593168 ALPPP05187 535 aa12.45□□□□□ -0.42
VMP1-217ENST00000593168 PABPC4LP0CB38 370 aaKnown RBP12.45□□□□□ -0.42
VMP1-217ENST00000593168 ITGA2P17301 1181 aa12.45□□□□□ -0.42
VMP1-217ENST00000593168 PEX2P28328 305 aa12.45□□□□□ -0.42
VMP1-217ENST00000593168 VLDLRP98155 873 aa12.45□□□□□ -0.42
VMP1-217ENST00000593168 CYP27C1Q4G0S4 372 aa12.45□□□□□ -0.42
VMP1-217ENST00000593168 NPSR1Q6W5P4 371 aa12.45□□□□□ -0.42
VMP1-217ENST00000593168 OLIG3Q7RTU3 272 aa12.45□□□□□ -0.42
VMP1-217ENST00000593168 TIPARPQ7Z3E1 657 aaKnown RBP12.45□□□□□ -0.42
VMP1-217ENST00000593168 LURAP1LQ8IV03 231 aa12.45□□□□□ -0.42
VMP1-217ENST00000593168 PEX5LQ8IYB4 626 aa12.45□□□□□ -0.42
VMP1-217ENST00000593168 ESX1Q8N693 406 aa12.45□□□□□ -0.42
VMP1-217ENST00000593168 ZSCAN1Q8NBB4 408 aa12.45□□□□□ -0.42
VMP1-217ENST00000593168 GPR32P1Q8NGA4 272 aa12.45□□□□□ -0.42
VMP1-217ENST00000593168 OR52P1PQ8NH57 321 aa12.45□□□□□ -0.42
VMP1-217ENST00000593168 SPPL2AQ8TCT8 520 aa12.45□□□□□ -0.42
VMP1-217ENST00000593168 APOBEC4Q8WW27 367 aaKnown RBP12.45□□□□□ -0.42
VMP1-217ENST00000593168 PROX1Q92786 737 aa12.45□□□□□ -0.42
VMP1-217ENST00000593168 ADIPOR1Q96A54 375 aa12.45□□□□□ -0.42
VMP1-217ENST00000593168 LCORQ96JN0 433 aaPredicted RBP12.45□□□□□ -0.42
VMP1-217ENST00000593168 ZNF347Q96SE7 839 aa12.45□□□□□ -0.42
VMP1-217ENST00000593168 G6PC3Q9BUM1 346 aa12.45□□□□□ -0.42
VMP1-217ENST00000593168 RSPO3Q9BXY4 272 aaPredicted RBP12.45□□□□□ -0.42
VMP1-217ENST00000593168 KLHL4Q9C0H6 718 aa12.45□□□□□ -0.42
VMP1-217ENST00000593168 NTN4Q9HB63 628 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms